##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933664.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 312075 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20827044780902 33.0 31.0 34.0 30.0 34.0 2 32.38274773692221 34.0 31.0 34.0 30.0 34.0 3 32.50984859408796 34.0 31.0 34.0 31.0 34.0 4 36.029855002803814 37.0 35.0 37.0 35.0 37.0 5 36.05406713129857 37.0 35.0 37.0 35.0 37.0 6 36.0084595049267 37.0 35.0 37.0 35.0 37.0 7 36.11702635584395 37.0 35.0 37.0 35.0 37.0 8 35.99839461667868 37.0 35.0 37.0 35.0 37.0 9 37.82454217736121 39.0 38.0 39.0 35.0 39.0 10 37.006472803012095 39.0 37.0 39.0 32.0 39.0 11 36.99315228711047 39.0 37.0 39.0 33.0 39.0 12 37.12663622526636 39.0 37.0 39.0 34.0 39.0 13 37.16422013938957 39.0 37.0 39.0 33.0 39.0 14 38.35026195626052 40.0 38.0 41.0 34.0 41.0 15 38.37819434430826 40.0 38.0 41.0 34.0 41.0 16 38.44993030521509 40.0 38.0 41.0 34.0 41.0 17 38.42993511175198 40.0 38.0 41.0 34.0 41.0 18 38.19134502923976 39.0 38.0 41.0 34.0 41.0 19 37.9242361611792 39.0 37.0 41.0 34.0 41.0 20 37.54256188416246 39.0 35.0 41.0 34.0 41.0 21 37.44490266762797 39.0 35.0 41.0 33.0 41.0 22 37.46248818393015 39.0 35.0 40.0 33.0 41.0 23 37.401105503484736 39.0 35.0 40.0 33.0 41.0 24 37.30745173435873 39.0 35.0 41.0 33.0 41.0 25 37.22197548666186 39.0 35.0 40.0 33.0 41.0 26 37.18609308659777 39.0 35.0 40.0 33.0 41.0 27 37.10374108787951 39.0 35.0 40.0 33.0 41.0 28 36.962672434510935 39.0 35.0 40.0 33.0 41.0 29 36.8587262677241 39.0 35.0 40.0 32.0 41.0 30 36.67804854602259 39.0 35.0 40.0 31.0 41.0 31 36.31013698630137 39.0 35.0 40.0 31.0 41.0 32 35.84943362973644 39.0 35.0 40.0 29.0 41.0 33 35.38987102459345 39.0 35.0 40.0 24.0 41.0 34 34.97833213169911 39.0 35.0 41.0 21.0 41.0 35 34.68338700632861 39.0 35.0 41.0 18.0 41.0 36 34.42719218136666 38.0 34.0 40.0 16.0 41.0 37 34.18746134743251 38.0 34.0 40.0 15.0 41.0 38 34.03521268925739 38.0 33.0 40.0 15.0 41.0 39 34.02313866858928 38.0 33.0 40.0 15.0 41.0 40 33.91342145317632 38.0 33.0 40.0 15.0 41.0 41 33.71293118641352 38.0 33.0 40.0 13.0 41.0 42 33.52922214211328 38.0 33.0 40.0 12.0 41.0 43 33.38751902587519 38.0 33.0 40.0 12.0 41.0 44 33.31166866939037 38.0 32.0 40.0 11.0 41.0 45 33.34569895057278 38.0 33.0 40.0 10.0 41.0 46 33.10577265080509 38.0 32.0 40.0 10.0 41.0 47 32.87202755747817 37.0 31.0 40.0 10.0 41.0 48 32.73383321316991 37.0 31.0 40.0 10.0 41.0 49 32.73058078987423 37.0 31.0 40.0 10.0 41.0 50 32.64849795722182 37.0 31.0 40.0 10.0 41.0 51 31.497899543378995 35.0 29.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 2.0 10 0.0 11 1.0 12 6.0 13 3.0 14 8.0 15 13.0 16 19.0 17 41.0 18 103.0 19 182.0 20 394.0 21 638.0 22 1031.0 23 1825.0 24 3549.0 25 6657.0 26 9162.0 27 8939.0 28 7594.0 29 6560.0 30 6772.0 31 7192.0 32 8548.0 33 10985.0 34 16019.0 35 20930.0 36 27365.0 37 39416.0 38 65104.0 39 63001.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.242489786109108 4.885364095169431 42.894176079468075 28.977970039253385 2 34.48241608587679 4.468156693102619 45.54514139229352 15.504285828727069 3 18.55803893294881 4.294800929263799 59.262677241047825 17.884482896739566 4 14.893214772090044 4.547304333894096 60.32203797164143 20.23744292237443 5 13.485219899062725 5.473043338940959 61.26732356004165 19.77441320195466 6 17.317952415284786 6.932948810382119 63.652327164944325 12.09677160938877 7 72.2656412721301 1.847312344788913 22.68236802050789 3.2046783625731 8 73.30769846991909 1.9341504446046622 21.11832091644637 3.6398301690298807 9 67.90130577585516 4.91163983016903 22.98421853721061 4.2028358567652 10 28.562685251942643 22.901225666906992 32.94688776736361 15.589201313786749 11 20.375550749018664 23.303052150925257 36.85332051590163 19.46807658415445 12 16.70399743651366 20.4742449731635 43.45141392293519 19.370343667387647 13 20.335816710726586 21.055195065288792 44.347031963470315 14.2619562605143 14 19.04285828727069 21.8723063366178 43.303372586717934 15.781462789393574 15 16.14900264359529 22.25106144356325 44.054794520547944 17.54514139229352 16 16.223664183289273 20.86934230553553 42.59745253544821 20.30954097572699 17 16.144836978290474 21.581671072658818 41.133701834494914 21.139790114555794 18 17.427861892173354 19.969238163902908 43.43571256909397 19.16718737482977 19 17.667868300889207 22.85412160538332 42.774973964591844 16.703036129135622 20 17.997917167347595 24.141632620363694 41.131458783946165 16.728991428342546 21 17.240086517664025 24.884402787791394 41.47624769686774 16.399262997676843 22 16.192581911399504 23.07714491708724 40.093567251461984 20.63670592005127 23 14.854442041176 24.414643915725385 38.82944804934711 21.9014659937515 24 15.117519826964672 24.121765601217657 39.98718256829288 20.773532003524796 25 14.857325963310103 26.14531763197949 38.09821357045582 20.899142834254587 26 15.22742930385324 26.456140350877195 39.236401506048225 19.08002883922134 27 16.031082271889773 25.491308179123607 40.38356164383561 18.094047905151005 28 14.911159176480012 24.099975967315547 40.59889449651526 20.389970359689176 29 17.107426099495314 22.695185452215014 39.260434190499076 20.936954257790596 30 20.483858046943844 24.67740126572138 36.67099254986782 18.167748137466955 31 19.299206921413123 28.34030281182408 33.7322758952175 18.6282143715453 32 18.101417928382602 27.85932868701434 33.67684050308419 20.362412881518864 33 20.73187535047665 26.024513338139872 31.917968437074425 21.32564287430906 34 20.698870463830808 25.855002803813186 31.455900024032683 21.99022670832332 35 23.72025955299207 23.84170471841705 31.623167507810624 20.814868220780262 36 26.099174877833853 27.25562765360891 29.33685812705279 17.308339341504446 37 23.05535528318513 29.728430665705357 30.525995353681008 16.690218697428502 38 19.981414724024674 29.326604181687095 32.7398862452936 17.952094848994633 39 22.221260914844187 27.594648722262278 31.403028118240805 18.781062244652727 40 25.203556837298724 25.783225186253304 30.505167027156933 18.508050949291036 41 25.575582792597935 24.332932788592483 31.05151005367299 19.039974365136587 42 26.93487142513819 24.324601457982855 31.480573580068892 17.25995353681006 43 24.275895217495794 24.75783064968357 33.00456621004566 17.961707922774973 44 21.65312825442602 25.489385564367538 31.696226868541217 21.161259312665226 45 23.842345590002402 24.47104061523672 30.194664744051913 21.491949050708964 46 24.81038211968277 25.166386285348075 32.06729151646239 17.955940078506767 47 21.92165344869022 26.697748938556437 34.00817111271329 17.372426500040056 48 21.11095089321477 25.72041977088841 35.28158295281583 17.88704638308099 49 23.531522871104702 23.06528879275815 34.27829848594088 19.124889850196265 50 22.240166626612194 21.664663942962427 32.56588960986942 23.529279820555956 51 20.981494832972842 21.480092926379875 30.968517183369382 26.569895057277897 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 310.0 1 612.0 2 914.0 3 6616.5 4 12319.0 5 8187.5 6 4056.0 7 4002.5 8 3949.0 9 4025.0 10 4101.0 11 4101.5 12 4102.0 13 3957.0 14 3812.0 15 3717.0 16 3622.0 17 3499.5 18 3377.0 19 3232.5 20 3088.0 21 2954.5 22 2821.0 23 2772.5 24 2724.0 25 2745.0 26 2991.0 27 3216.0 28 3540.5 29 3865.0 30 4201.0 31 4537.0 32 4959.0 33 5381.0 34 6466.5 35 7552.0 36 8184.0 37 8816.0 38 9862.5 39 10909.0 40 12523.5 41 14138.0 42 16165.5 43 18193.0 44 20347.5 45 22502.0 46 25941.0 47 29380.0 48 32660.5 49 35941.0 50 34382.0 51 32823.0 52 27724.5 53 22626.0 54 18360.5 55 14095.0 56 11337.0 57 8579.0 58 7257.0 59 5935.0 60 5213.5 61 4492.0 62 3611.5 63 2731.0 64 2223.5 65 1716.0 66 1402.0 67 1088.0 68 824.5 69 561.0 70 465.5 71 370.0 72 294.0 73 218.0 74 192.5 75 170.5 76 174.0 77 120.0 78 66.0 79 46.0 80 26.0 81 20.0 82 14.0 83 8.0 84 2.0 85 1.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 312075.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.01497141352272 #Duplication Level Percentage of deduplicated Percentage of total 1 75.22635907649413 39.128969169072384 2 10.565417302463553 10.991197579191603 3 4.82797588875919 7.5338108351695885 4 2.792537580397026 5.810150496621569 5 1.7429061992921773 4.5328608066317075 6 1.1389710403578046 3.554612766302487 7 0.8103090810947481 2.9503742582482837 8 0.624019251181102 2.5966674809338306 9 0.446136885006034 2.088521758809624 >10 1.7569499035330745 14.270506778597799 >50 0.0486937434438524 1.7893135823297286 >100 0.016642165480810312 1.4440187018120583 >500 0.0018491294978678124 0.586712749626125 >1k 6.163764992892708E-4 0.422882031014677 >5k 6.163764992892708E-4 2.299401005638562 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7172 2.298165505086918 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCC 1319 0.4226548105423376 No Hit CTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGCT 651 0.20860370103340542 TruSeq Adapter, Index 14 (95% over 22bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGC 635 0.20347672835055675 No Hit CCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGC 544 0.1743170712168549 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGC 445 0.14259392774172874 TruSeq Adapter, Index 15 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGC 429 0.13746695505888007 TruSeq Adapter, Index 15 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.408715853560842E-4 0.0 0.0 0.2275094128014099 0.0 2 6.408715853560842E-4 0.0 0.0 0.7575102138908916 0.0 3 6.408715853560842E-4 0.0 0.0 1.0757029560201874 0.0 4 6.408715853560842E-4 0.0 0.0 1.5941680685732595 0.0 5 6.408715853560842E-4 0.0 0.0 2.8009292637987664 0.0 6 6.408715853560842E-4 0.0 0.0 3.9580229111591763 0.0 7 6.408715853560842E-4 0.0 0.0 4.939838179924697 0.0 8 6.408715853560842E-4 0.0 0.0 6.488824801730353 0.0 9 6.408715853560842E-4 0.0 0.0 7.257229832572298 0.0 10 6.408715853560842E-4 0.0 0.0 9.068973804373949 0.0 11 6.408715853560842E-4 0.0 0.0 13.223103420652087 0.0 12 6.408715853560842E-4 0.0 0.0 16.733477529440037 0.0 13 6.408715853560842E-4 0.0 0.0 17.945686133141074 0.0 14 6.408715853560842E-4 0.0 0.0 18.367379636305376 0.0 15 6.408715853560842E-4 0.0 0.0 18.907954818553232 0.0 16 6.408715853560842E-4 0.0 0.0 20.44957141712729 0.0 17 6.408715853560842E-4 0.0 0.0 22.651926620203476 0.0 18 6.408715853560842E-4 0.0 0.0 24.703356564928303 0.0 19 6.408715853560842E-4 0.0 0.0 25.910758631739164 0.0 20 6.408715853560842E-4 0.0 0.0 26.979732436113114 0.0 21 6.408715853560842E-4 0.0 0.0 28.34030281182408 0.0 22 6.408715853560842E-4 0.0 0.0 29.507009532964833 0.0 23 6.408715853560842E-4 0.0 0.0 30.422815028438677 0.0 24 6.408715853560842E-4 0.0 0.0 30.979412000320437 0.0 25 6.408715853560842E-4 0.0 0.0 31.3652166947048 0.0 26 6.408715853560842E-4 0.0 0.0 31.661940238724664 0.0 27 6.408715853560842E-4 0.0 0.0 31.951293759512936 0.0 28 6.408715853560842E-4 0.0 0.0 32.22558679804534 0.0 29 6.408715853560842E-4 0.0 0.0 32.49315068493151 0.0 30 6.408715853560842E-4 0.0 0.0 32.769686774012655 0.0 31 6.408715853560842E-4 0.0 0.0 33.0215493070576 0.0 32 6.408715853560842E-4 0.0 0.0 33.28238404229752 0.0 33 6.408715853560842E-4 0.0 0.0 33.508611711928225 0.0 34 6.408715853560842E-4 0.0 0.0 33.73772330369302 0.0 35 9.613073780341264E-4 0.0 0.0 33.96202835856765 0.0 36 9.613073780341264E-4 0.0 0.0 34.186012977649604 0.0 37 9.613073780341264E-4 0.0 0.0 34.42377633581671 0.0 38 9.613073780341264E-4 0.0 0.0 34.66378274453256 0.0 39 9.613073780341264E-4 0.0 0.0 34.91244091965073 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 25 3.884254E-5 45.0 21 GTGCATA 20 7.0253795E-4 45.0 11 CGGGTTA 20 7.0253795E-4 45.0 6 CGGGTAC 25 3.884254E-5 45.0 6 TCTTGCG 45 3.8198777E-10 45.0 1 CACGGGA 35 1.2081182E-7 45.0 4 GGATGAT 35 1.2081182E-7 45.0 8 GACACGG 25 3.884254E-5 45.0 16 TTTCGCG 40 6.7884685E-9 45.0 1 TACGGGT 20 7.0253795E-4 45.0 4 TGTTCCG 20 7.0253795E-4 45.0 1 AATAGGC 20 7.0253795E-4 45.0 44 ATCGGGG 20 7.0253795E-4 45.0 4 CCGCACT 20 7.0253795E-4 45.0 34 CGTTTTT 4540 0.0 44.306168 1 CGTTTGG 120 0.0 41.249996 2 TTGGGCG 425 0.0 39.705883 5 GTTTGCG 40 3.4474397E-7 39.375 1 ATTTGCG 40 3.4474397E-7 39.375 1 CTTGGGC 435 0.0 39.310345 4 >>END_MODULE