##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933663.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 314233 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.125222366842436 33.0 31.0 34.0 30.0 34.0 2 32.312583337841666 34.0 31.0 34.0 30.0 34.0 3 32.456963463417274 34.0 31.0 34.0 31.0 34.0 4 35.932788726836456 37.0 35.0 37.0 35.0 37.0 5 36.018931811744785 37.0 35.0 37.0 35.0 37.0 6 36.00600828047977 37.0 35.0 37.0 35.0 37.0 7 36.04662145605331 37.0 35.0 37.0 35.0 37.0 8 35.96007421244745 37.0 35.0 37.0 35.0 37.0 9 37.787256589855296 39.0 38.0 39.0 35.0 39.0 10 37.03739263540112 39.0 37.0 39.0 33.0 39.0 11 37.01305082534298 39.0 37.0 39.0 33.0 39.0 12 37.11418915263515 39.0 37.0 39.0 34.0 39.0 13 37.168381423975205 39.0 37.0 39.0 34.0 39.0 14 38.37918041707905 40.0 38.0 41.0 34.0 41.0 15 38.39998981647376 40.0 38.0 41.0 34.0 41.0 16 38.52493850104859 40.0 38.0 41.0 34.0 41.0 17 38.54140717238482 40.0 38.0 41.0 34.0 41.0 18 38.35035467312472 39.0 38.0 41.0 34.0 41.0 19 38.115653034531704 39.0 37.0 41.0 34.0 41.0 20 37.69140414915047 39.0 35.0 41.0 34.0 41.0 21 37.629058692117 39.0 35.0 41.0 34.0 41.0 22 37.62189203552778 39.0 35.0 41.0 34.0 41.0 23 37.49146970560062 39.0 35.0 41.0 33.0 41.0 24 37.41182498337221 39.0 35.0 41.0 33.0 41.0 25 37.34066441143992 39.0 35.0 41.0 33.0 41.0 26 37.33545490129936 39.0 35.0 41.0 33.0 41.0 27 37.271225491912055 39.0 35.0 41.0 33.0 41.0 28 37.19609334474737 39.0 35.0 41.0 33.0 41.0 29 37.01694602412859 39.0 35.0 41.0 33.0 41.0 30 36.73559428831472 39.0 35.0 41.0 32.0 41.0 31 36.37527567123758 39.0 35.0 41.0 31.0 41.0 32 36.0052636101237 39.0 35.0 41.0 29.0 41.0 33 35.475195157733275 39.0 35.0 41.0 24.0 41.0 34 35.06518411497201 39.0 35.0 41.0 21.0 41.0 35 34.83323839316685 39.0 35.0 41.0 18.0 41.0 36 34.57119716897971 39.0 35.0 41.0 18.0 41.0 37 34.360582752288906 38.0 34.0 41.0 15.0 41.0 38 34.21303936887596 38.0 34.0 40.0 15.0 41.0 39 34.244169135641386 38.0 34.0 40.0 15.0 41.0 40 34.096485728742685 38.0 34.0 40.0 15.0 41.0 41 33.922414259482615 38.0 33.0 40.0 14.0 41.0 42 33.66361266957958 38.0 33.0 40.0 13.0 41.0 43 33.556354679489424 38.0 33.0 40.0 12.0 41.0 44 33.4741322521823 38.0 33.0 40.0 12.0 41.0 45 33.49107827631089 38.0 33.0 40.0 12.0 41.0 46 33.219534549203935 38.0 32.0 40.0 10.0 41.0 47 33.09091661283188 38.0 32.0 40.0 10.0 41.0 48 32.93763544885483 37.0 32.0 40.0 10.0 41.0 49 32.93146168607371 37.0 32.0 40.0 10.0 41.0 50 32.763544885483064 37.0 31.0 40.0 10.0 41.0 51 31.737128181954155 36.0 29.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 3.0 10 4.0 11 3.0 12 11.0 13 7.0 14 4.0 15 13.0 16 23.0 17 52.0 18 97.0 19 184.0 20 367.0 21 626.0 22 1030.0 23 1894.0 24 3576.0 25 6381.0 26 9102.0 27 8821.0 28 7596.0 29 6619.0 30 6694.0 31 7109.0 32 8434.0 33 10592.0 34 15447.0 35 20075.0 36 25755.0 37 37809.0 38 65543.0 39 70331.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.195526886100442 5.045937250384269 42.85355134565752 28.90498451785777 2 34.54984040504976 4.411376271747398 45.55123109285149 15.487552230351366 3 18.729414160829702 4.359822170173088 58.86682811798888 18.043935551008328 4 14.992060031887167 4.6586450181871415 60.04366186874071 20.305633081184983 5 13.437481104785304 5.52965474663705 61.12152447387766 19.911339674699985 6 17.34509106300102 6.924797841092438 63.606941346071224 12.123169749835313 7 72.21997689612485 1.8823611778521032 22.587697663835435 3.3099642621876124 8 73.24023893098433 1.9768770307383374 21.037255794267313 3.745628244010018 9 67.80096297969978 4.9848360929628655 22.981036364735722 4.233164562601637 10 28.636394013359514 22.871245222494135 32.744492144364216 15.747868619782135 11 20.321544840930137 23.305954498731833 36.94933377461947 19.423166885718558 12 16.85819121479921 20.531580069566214 43.345861192172684 19.26436752346189 13 20.23466663272158 21.159139873915215 44.23310091556266 14.37309257780055 14 19.117979333806442 21.859257302702133 43.10845773677494 15.914305626716482 15 16.20771847641718 22.302240694007313 43.9746939373013 17.515346892274202 16 16.225539647331757 21.027390503225313 42.47835205086671 20.268717798576215 17 16.334694319183534 21.700139705250564 40.90276960090124 21.06239637466466 18 17.505481601232205 20.06600197942291 43.450560571295824 18.977955848049056 19 17.805895625220774 22.969898132914114 42.60946495116681 16.614741290698305 20 17.969786750595894 24.10313366196421 41.06252366874262 16.86455591869727 21 17.25853108998737 24.884401065451435 41.32825005648675 16.528817788074456 22 16.294278449430834 23.1309251415351 39.88409874201627 20.690697667017783 23 15.061435304376053 24.428370031155225 38.68403382203651 21.82616084243221 24 15.250148774953617 24.120318362488984 39.92865166930272 20.700881193254688 25 14.981240035260459 26.16243360818246 38.10325459133828 20.753071765218802 26 15.364076974728944 26.450118224374908 39.184299548424256 19.001505252471894 27 16.164438489910353 25.399305610804724 40.36272447515061 18.07353142413432 28 15.19350291026086 24.203695983553605 40.340448011507384 20.262353094678154 29 17.33077047923038 22.79073171818364 39.1575677920524 20.720930010533582 30 20.730158831185776 24.7599711042443 36.46816215992592 18.041707904644007 31 19.2551387028097 28.42126702160499 33.60881893372116 18.714775341864158 32 18.284203123160204 27.6234513879828 33.59577129073013 20.49657419812687 33 20.837085856673234 25.988358956570444 31.88812123487985 21.286433951876475 34 20.742570003786998 25.933622503047104 31.592162503619925 21.731644989545973 35 23.81767669213609 24.051579560389904 31.42477079110087 20.705972956373138 36 25.878886049523757 27.37109087842461 29.460941403353562 17.289081668698067 37 22.840694643783436 29.864781865685654 30.57571929109928 16.718804199431634 38 20.098461969303035 29.262999112123804 32.85873857933444 17.77980033923872 39 22.406621837935546 27.57667081433204 31.321662587952254 18.695044759780163 40 25.244961541276695 25.870611934456278 30.566172235252186 18.318254289014842 41 25.588655551772092 24.352630054768277 31.025703856692328 19.033010536767303 42 26.74193989810109 24.63108585030853 31.383718450958366 17.243255800632014 43 24.053488971559318 24.773336982430237 33.16265319046695 18.0105208555435 44 21.690274414208567 25.769731377671985 31.53297075736794 21.007023450751515 45 24.033440154280424 24.60912762186021 30.195428233190018 21.162003990669344 46 24.728784055143795 25.289514468563134 32.05965000493264 17.922051471360422 47 21.756149099553515 27.024532751175084 34.02156998151054 17.197748167760864 48 21.30330041720634 25.561923795400226 35.195857850703135 17.93891793669029 49 23.693564966123866 23.016678706564875 34.107175248939484 19.182581078371783 50 22.172082499291925 21.685500886285016 32.47431046389144 23.668106150531614 51 21.08149048635885 21.617398554575747 31.077257958266635 26.22385300079877 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 329.0 1 618.5 2 908.0 3 6562.0 4 12216.0 5 8281.0 6 4346.0 7 4197.0 8 4048.0 9 4118.5 10 4189.0 11 4083.5 12 3978.0 13 3905.0 14 3832.0 15 3740.5 16 3649.0 17 3502.0 18 3355.0 19 3168.5 20 2982.0 21 2906.5 22 2831.0 23 2740.5 24 2650.0 25 2737.0 26 3055.5 27 3287.0 28 3624.5 29 3962.0 30 4308.5 31 4655.0 32 5065.0 33 5475.0 34 6594.0 35 7713.0 36 8205.5 37 8698.0 38 9893.5 39 11089.0 40 12752.5 41 14416.0 42 16316.5 43 18217.0 44 20272.0 45 22327.0 46 25885.5 47 29444.0 48 32680.5 49 35917.0 50 34540.0 51 33163.0 52 27899.0 53 22635.0 54 18418.0 55 14201.0 56 11496.0 57 8791.0 58 7445.0 59 6099.0 60 5397.0 61 4695.0 62 3754.0 63 2813.0 64 2296.0 65 1779.0 66 1451.0 67 1123.0 68 833.0 69 543.0 70 466.0 71 389.0 72 300.5 73 212.0 74 201.5 75 174.5 76 158.0 77 116.0 78 74.0 79 44.5 80 15.0 81 11.5 82 8.0 83 5.5 84 3.0 85 3.0 86 3.0 87 2.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 314233.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.23358406390302 #Duplication Level Percentage of deduplicated Percentage of total 1 75.436074815167 39.402965553089025 2 10.434867621012794 10.901010701557428 3 4.8368294337358675 7.579348104894085 4 2.7764916333228995 5.801044365275803 5 1.7170281065649884 4.484326597217327 6 1.1902409364188062 3.7302330005238216 7 0.7975030069153335 2.915950824704925 8 0.6075654585287584 2.5388257161908547 9 0.41312682643087084 1.9421185335687319 >10 1.7257954607382484 14.281527823047504 >50 0.04237040362233432 1.5456824046386821 >100 0.019035978439019764 1.5787194014591395 >500 0.0018421914618406224 0.5981941657296415 >1k 6.140638206135409E-4 0.4342921717951391 >5k 6.140638206135409E-4 2.265760636307875 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7064 2.2480134167958172 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCC 1354 0.4308904538988585 No Hit CTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGCT 670 0.2132175805851072 TruSeq Adapter, Index 14 (95% over 22bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGC 642 0.2043069951278192 No Hit CCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGC 553 0.17598406278143924 TruSeq Adapter, Index 15 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGC 486 0.15466230472292855 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGC 440 0.14002348575738385 TruSeq Adapter, Index 15 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.182351949031451E-4 0.0 0.0 0.23072051630478022 0.0 2 3.182351949031451E-4 0.0 0.0 0.7602638806236137 0.0 3 3.182351949031451E-4 0.0 0.0 1.08772789617895 0.0 4 6.364703898062902E-4 0.0 0.0 1.6089971454303018 0.0 5 6.364703898062902E-4 0.0 0.0 2.7753291347503284 0.0 6 6.364703898062902E-4 0.0 0.0 3.8974264319788183 0.0 7 6.364703898062902E-4 0.0 0.0 4.87504495072128 0.0 8 6.364703898062902E-4 0.0 0.0 6.427396231458822 0.0 9 6.364703898062902E-4 0.0 0.0 7.1739759987016 0.0 10 6.364703898062902E-4 0.0 0.0 9.002873663809975 0.0 11 6.364703898062902E-4 0.0 0.0 13.132930023262993 0.0 12 6.364703898062902E-4 0.0 0.0 16.511314852354783 0.0 13 6.364703898062902E-4 0.0 0.0 17.661735081929653 0.0 14 6.364703898062902E-4 0.0 0.0 18.064939073871937 0.0 15 6.364703898062902E-4 0.0 0.0 18.596073614165284 0.0 16 6.364703898062902E-4 0.0 0.0 20.137923133471023 0.0 17 6.364703898062902E-4 0.0 0.0 22.32929068557408 0.0 18 6.364703898062902E-4 0.0 0.0 24.302667129168483 0.0 19 6.364703898062902E-4 0.0 0.0 25.485547348623474 0.0 20 6.364703898062902E-4 0.0 0.0 26.564682894540038 0.0 21 6.364703898062902E-4 0.0 0.0 27.902861889107765 0.0 22 6.364703898062902E-4 0.0 0.0 29.031960360624122 0.0 23 6.364703898062902E-4 0.0 0.0 29.896605385175967 0.0 24 6.364703898062902E-4 0.0 0.0 30.418192869622224 0.0 25 6.364703898062902E-4 0.0 0.0 30.81630509844606 0.0 26 6.364703898062902E-4 0.0 0.0 31.125947943086818 0.0 27 6.364703898062902E-4 0.0 0.0 31.421270203956936 0.0 28 6.364703898062902E-4 0.0 0.0 31.67554012468455 0.0 29 6.364703898062902E-4 0.0 0.0 31.94476709957261 0.0 30 9.547055847094353E-4 0.0 0.0 32.19458172757158 0.0 31 9.547055847094353E-4 0.0 0.0 32.45044282427371 0.0 32 9.547055847094353E-4 0.0 0.0 32.70916803772997 0.0 33 9.547055847094353E-4 0.0 0.0 32.933842085331584 0.0 34 9.547055847094353E-4 0.0 0.0 33.145468489942175 0.0 35 0.0012729407796125804 0.0 0.0 33.37364312468773 0.0 36 0.0012729407796125804 0.0 0.0 33.59768070189955 0.0 37 0.0012729407796125804 0.0 0.0 33.83540239249219 0.0 38 0.0012729407796125804 0.0 0.0 34.087762902050386 0.0 39 0.0012729407796125804 0.0 0.0 34.33566811887994 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAG 25 3.884315E-5 45.0 6 GGCCGAT 80 0.0 45.0 8 TTCACGG 20 7.025454E-4 45.0 2 ATCCGGG 25 3.884315E-5 45.0 3 GCCGATG 20 7.025454E-4 45.0 9 GTACGGC 20 7.025454E-4 45.0 9 CGTTTTT 4550 0.0 44.010986 1 CTTTGCG 75 0.0 42.000004 1 TCGGGTA 50 1.0768417E-9 40.5 5 TCGGGAA 85 0.0 39.705883 5 CTTGTTG 165 0.0 39.545452 1 TTGGGTC 330 0.0 39.545452 5 CGTCGGG 40 3.4475306E-7 39.375 3 TTCTGCG 75 0.0 39.000004 1 TTCTCGG 110 0.0 38.863632 2 TGGGCAA 245 0.0 38.57143 6 CGGGTGT 70 0.0 38.571426 6 TTGTCCG 35 6.2338077E-6 38.571426 1 TTTCCGG 140 0.0 38.571426 2 CTTGGGC 550 0.0 38.454544 4 >>END_MODULE