SRR2933656.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933656.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	452709
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28772	6.355517562054211	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC	2647	0.5847023142901953	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC	2602	0.5747621540548122	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCG	2517	0.5559862958324222	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCC	1025	0.2264147609170571	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAGTGCTT	914	0.20189569900311236	No Hit
GCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCTGC	645	0.1424756300404896	No Hit
GAACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCT	593	0.13098922265738036	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	579	0.12789672836192786	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCT	568	0.12546691141550093	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTC	564	0.1245833416168002	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	513	0.11331782668336614	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC	503	0.11110890218661437	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	471	0.10404034379700867	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAACA	20	7.0287497E-4	45.000004	33
CGGCGAA	50	2.1827873E-11	45.0	31
GCGAACC	25	3.8870465E-5	45.0	33
GCGATAG	25	3.8870465E-5	45.0	9
CGCCCTT	30	2.1625765E-6	44.999996	38
CGTTTTT	14560	0.0	44.58276	1
CGATGAA	425	0.0	43.941174	19
CCGATGA	435	0.0	42.931034	18
CGGGTAT	60	3.6379788E-12	41.249996	6
ATGAATG	475	0.0	41.210526	21
GTTTGCG	55	6.002665E-11	40.909092	1
TCTTGCG	55	6.002665E-11	40.909092	1
TCGTCTG	55	6.002665E-11	40.909092	1
GGCGAAC	55	6.002665E-11	40.909092	32
GATGAAT	490	0.0	40.408165	20
GTTTTTT	16370	0.0	40.326817	2
GCTTGCG	45	1.9239451E-8	40.0	1
CCCTTCG	40	3.4520235E-7	39.375004	40
GCTACGA	40	3.4520235E-7	39.375004	10
AGCTACG	40	3.4520235E-7	39.375004	9