##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933656.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 452709 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.35113505585266 33.0 31.0 34.0 30.0 34.0 2 32.53835907834834 34.0 31.0 34.0 31.0 34.0 3 32.543072923224415 34.0 31.0 34.0 31.0 34.0 4 36.13164306430842 37.0 35.0 37.0 35.0 37.0 5 36.13085889611207 37.0 35.0 37.0 35.0 37.0 6 36.067822817748265 37.0 35.0 37.0 35.0 37.0 7 36.16917269150823 37.0 36.0 37.0 35.0 37.0 8 35.97753302894354 37.0 36.0 37.0 35.0 37.0 9 37.8337983119399 39.0 38.0 39.0 35.0 39.0 10 37.392399974376474 39.0 37.0 39.0 34.0 39.0 11 37.37544426993941 39.0 37.0 39.0 34.0 39.0 12 37.41252106761739 39.0 37.0 39.0 35.0 39.0 13 37.38936049426894 39.0 37.0 39.0 34.0 39.0 14 38.7356668411717 40.0 38.0 41.0 34.0 41.0 15 38.75010658060697 40.0 38.0 41.0 34.0 41.0 16 38.80148395547692 40.0 38.0 41.0 35.0 41.0 17 38.691439754897736 40.0 38.0 41.0 34.0 41.0 18 38.14665712411284 39.0 38.0 40.0 34.0 41.0 19 37.523316302525465 37.0 37.0 40.0 34.0 41.0 20 36.72802617133744 37.0 35.0 40.0 33.0 41.0 21 36.66931516713827 37.0 35.0 40.0 33.0 41.0 22 36.67728496672255 37.0 35.0 40.0 33.0 41.0 23 36.55979006381583 37.0 35.0 40.0 33.0 41.0 24 36.48905146573185 37.0 35.0 40.0 33.0 41.0 25 36.43552480732656 36.0 35.0 40.0 33.0 41.0 26 36.32558884404772 36.0 35.0 40.0 33.0 41.0 27 36.2106076972183 36.0 35.0 40.0 33.0 41.0 28 36.05945099390558 36.0 35.0 40.0 32.0 41.0 29 35.844429865542764 36.0 35.0 40.0 31.0 41.0 30 35.55413079925515 36.0 35.0 40.0 31.0 41.0 31 34.98686794386681 36.0 35.0 40.0 27.0 41.0 32 34.02859231868595 36.0 34.0 40.0 21.0 41.0 33 32.907598479376375 35.0 33.0 40.0 15.0 41.0 34 31.92006785816054 35.0 31.0 40.0 10.0 41.0 35 31.26176638856307 35.0 28.0 40.0 7.0 41.0 36 30.876032948317793 35.0 25.0 40.0 7.0 41.0 37 30.67328681338343 35.0 24.0 40.0 7.0 41.0 38 30.49642264677751 35.0 23.0 40.0 7.0 41.0 39 30.38861608671354 35.0 23.0 40.0 7.0 41.0 40 30.21372890753221 35.0 23.0 40.0 7.0 41.0 41 30.0688190426963 35.0 22.0 40.0 7.0 41.0 42 29.982907342244136 35.0 21.0 40.0 7.0 41.0 43 29.791236754736488 35.0 21.0 40.0 7.0 41.0 44 29.60675179861677 35.0 20.0 40.0 7.0 41.0 45 29.60342074047567 35.0 20.0 40.0 7.0 41.0 46 29.42865063429267 35.0 20.0 40.0 7.0 41.0 47 29.26102639885666 35.0 20.0 39.0 7.0 41.0 48 29.229823131415547 35.0 20.0 39.0 7.0 41.0 49 29.243874100139383 35.0 20.0 39.0 7.0 41.0 50 29.106580606968272 35.0 20.0 39.0 7.0 41.0 51 28.341077822618946 34.0 18.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 2.0 10 7.0 11 7.0 12 6.0 13 7.0 14 10.0 15 19.0 16 48.0 17 97.0 18 202.0 19 451.0 20 907.0 21 1646.0 22 2742.0 23 4442.0 24 7867.0 25 15427.0 26 23889.0 27 25528.0 28 21005.0 29 16476.0 30 13776.0 31 13167.0 32 13375.0 33 15997.0 34 22000.0 35 30734.0 36 38379.0 37 44501.0 38 71803.0 39 68161.0 40 28.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.102940299397627 3.603860316450523 31.189130324336382 43.104069059815465 2 47.95972688857522 7.569984250368337 32.94345815965664 11.526830701399795 3 14.48612684969815 7.48604511949177 64.69674780046343 13.331080230346645 4 11.740433700235691 3.695751575515397 69.3405697699847 15.223244954264217 5 13.893030622320298 4.445681442162625 65.10694507951024 16.55434285600684 6 13.684729042276606 8.53638871769724 67.46651822694048 10.312364013085668 7 53.39809899957809 1.6617738989063615 41.99806056429185 2.942066537223691 8 53.70867378382139 4.858308538155858 38.33897713542254 3.0940405426002133 9 49.5483853866391 3.8380063131062117 39.530029224071086 7.083579076183597 10 25.821885582128917 15.564082004113017 45.51643550271808 13.097596911039982 11 18.424197442507218 16.180813723606114 49.96763925612259 15.427349577764083 12 14.267222432070048 14.496508794832883 54.323196578817736 16.913072194279327 13 16.17970926135774 15.106392848386049 56.34171178394951 12.3721861063067 14 13.913352727690414 17.852527782747856 54.658290424974986 13.575829064586745 15 12.231256723413937 15.72930955647005 56.74086444051256 15.298569279603456 16 12.876704461364808 15.524321363171486 53.79150845244959 17.807465723014122 17 12.98516265415532 16.92853466575659 53.24347428480547 16.842828395282623 18 13.73266270385612 15.171556121040227 54.134554426795134 16.961226748308516 19 14.528317307586109 17.4988789708179 52.14696416461789 15.825839556978103 20 16.159166263537948 17.766158834924862 52.38663247251546 13.688042429021733 21 14.96656792774166 20.673545257549552 51.02858569191247 13.33130112279632 22 13.929919661416054 16.90335292649362 52.27994141932235 16.88678599276798 23 14.151695680889931 18.80059817675372 50.41494646671482 16.632759675641527 24 13.650269820127278 18.205293024879115 51.106339834198124 17.03809732079548 25 13.190371739903558 21.161938463781368 49.431312388311255 16.21637740800382 26 13.457651604010524 19.039382914852588 51.39924322246742 16.103722258669475 27 15.15079223077076 18.870179298401403 50.25347408600227 15.725554384825571 28 12.889295330996292 19.32632220698064 51.24616475484252 16.53821770718055 29 14.612477330912352 18.147640095513896 50.47856349222128 16.76131908135248 30 16.37983782076345 20.571713838249295 48.58043467216247 14.468013668824787 31 16.436828072779644 21.823511350558526 45.10182037467778 16.637840201984055 32 17.706959658411918 21.958697529759736 44.041757508686594 16.292585303141756 33 18.48008323227504 20.47054509629806 42.659633451069006 18.38973822035789 34 17.95745169634357 22.596193139522295 40.49665458384967 18.949700580284464 35 19.34708609725011 23.14157659777031 38.318875922502095 19.192461382477486 36 19.214771519894676 26.315580207152937 37.26367269040377 17.205975582548614 37 20.73826674530438 25.525006129765476 37.09535264375128 16.641374481178858 38 19.17037213750997 25.235637020690994 37.06199788385033 18.531992957948702 39 21.039343154211647 24.195675367620257 37.262568228155395 17.5024132500127 40 20.03317804594121 23.444199253825303 37.8249604050284 18.697662295205085 41 19.078039093545744 24.820138322851985 36.086095041185395 20.015727542416872 42 18.108763024371065 25.142199514478396 37.202485481843745 19.546551979306795 43 18.490686069859446 24.55153310404697 38.44058766227312 18.517193163820465 44 19.32919380882642 23.993337883717796 37.20844957798498 19.469018729470807 45 19.770978708176777 23.248267650963424 36.04699707759289 20.93375656326691 46 21.03691333726522 23.894598958712994 36.21134106015123 18.857146643870564 47 17.526048742127944 24.75188255590236 39.40257428060852 18.31949442136118 48 18.01753444265522 24.213346763594274 38.278673496661206 19.490445297089302 49 18.392168037304316 22.39319297827081 39.725077257134274 19.4895617272906 50 17.949057783255913 22.25866947641863 38.52651482519676 21.265757915128702 51 17.41405627014263 21.793690869852377 36.847953100115085 23.944299759889905 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 460.0 1 1074.0 2 1688.0 3 23453.0 4 45218.0 5 29212.0 6 13206.0 7 12899.0 8 12592.0 9 12455.0 10 12318.0 11 11982.0 12 11646.0 13 11133.0 14 10620.0 15 10042.5 16 9465.0 17 9100.0 18 8735.0 19 8257.5 20 7780.0 21 7306.5 22 6833.0 23 6512.0 24 6191.0 25 5861.5 26 5395.5 27 5259.0 28 5415.5 29 5572.0 30 5809.0 31 6046.0 32 6518.0 33 6990.0 34 7651.5 35 8313.0 36 8867.0 37 9421.0 38 9821.0 39 10221.0 40 11567.0 41 12913.0 42 14198.5 43 15484.0 44 17496.0 45 19508.0 46 27874.0 47 36240.0 48 34285.5 49 32331.0 50 31633.5 51 30936.0 52 26873.5 53 22811.0 54 20014.0 55 17217.0 56 15567.5 57 13918.0 58 12957.0 59 11996.0 60 10844.0 61 9692.0 62 8794.5 63 7897.0 64 6830.0 65 5763.0 66 4788.0 67 3813.0 68 3350.0 69 2887.0 70 2377.5 71 1868.0 72 1669.5 73 1471.0 74 1127.0 75 635.5 76 488.0 77 386.5 78 285.0 79 237.0 80 189.0 81 136.0 82 83.0 83 51.5 84 20.0 85 11.0 86 2.0 87 2.5 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 452709.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.929621163979995 #Duplication Level Percentage of deduplicated Percentage of total 1 80.75537040408155 40.320850512326736 2 7.863736483287127 7.852667670877891 3 3.2669192888462235 4.893481273961727 4 1.867159024399106 3.7290617096461545 5 1.3364838956483527 3.3365067300741216 6 0.9647499491105924 2.8901759686236517 7 0.7450249456050709 2.6039169304243193 8 0.5802240246884616 2.3176292594347734 9 0.4628651320140272 2.079961262232837 >10 2.072347267165871 16.23766040249102 >50 0.054973065411850104 1.8761929018589747 >100 0.02438321449704007 2.4672069471471336 >500 0.0035466493813876465 1.0799840925112925 >1k 0.0017733246906938233 1.9459192779804817 >5k 0.0 0.0 >10k+ 4.433311726734558E-4 6.368785060408875 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28772 6.355517562054211 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC 2647 0.5847023142901953 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC 2602 0.5747621540548122 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCG 2517 0.5559862958324222 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCC 1025 0.2264147609170571 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAGTGCTT 914 0.20189569900311236 No Hit GCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCTGC 645 0.1424756300404896 No Hit GAACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCT 593 0.13098922265738036 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 579 0.12789672836192786 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCT 568 0.12546691141550093 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTC 564 0.1245833416168002 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 513 0.11331782668336614 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC 503 0.11110890218661437 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 471 0.10404034379700867 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2089244967517764E-4 0.0 0.0 0.09343750621260015 0.0 2 2.2089244967517764E-4 0.0 0.0 0.4223463637789397 0.0 3 2.2089244967517764E-4 0.0 0.0 0.6226958156343259 0.0 4 2.2089244967517764E-4 0.0 0.0 1.0291379230366526 0.0 5 2.2089244967517764E-4 0.0 0.0 2.295293444574771 0.0 6 2.2089244967517764E-4 0.0 0.0 3.278706630528662 0.0 7 2.2089244967517764E-4 0.0 0.0 4.1589630424842445 0.0 8 2.2089244967517764E-4 0.0 0.0 5.32085732777568 0.0 9 2.2089244967517764E-4 0.0 0.0 5.90578053451555 0.0 10 2.2089244967517764E-4 0.0 0.0 7.476325851706063 0.0 11 2.2089244967517764E-4 0.0 0.0 9.530183848785864 0.0 12 2.2089244967517764E-4 0.0 0.0 11.832324959300566 0.0 13 2.2089244967517764E-4 0.0 0.0 12.493235168728697 0.0 14 2.2089244967517764E-4 0.0 0.0 12.759852355486638 0.0 15 2.2089244967517764E-4 0.0 0.0 13.133160595437687 0.0 16 2.2089244967517764E-4 0.0 0.0 13.88706652617907 0.0 17 2.2089244967517764E-4 0.0 0.0 14.8576679500518 0.0 18 2.2089244967517764E-4 0.0 0.0 15.751840586336918 0.0 19 2.2089244967517764E-4 0.0 0.0 16.507955441575053 0.0 20 2.2089244967517764E-4 0.0 0.0 16.986850272470836 0.0 21 2.2089244967517764E-4 0.0 0.0 17.504622174509453 0.0 22 2.2089244967517764E-4 0.0 0.0 17.99213181094257 0.0 23 2.2089244967517764E-4 0.0 0.0 18.37604288847803 0.0 24 2.2089244967517764E-4 0.0 0.0 18.650170418524926 0.0 25 2.2089244967517764E-4 0.0 0.0 18.878352319039383 0.0 26 2.2089244967517764E-4 0.0 0.0 19.068982503109062 0.0 27 2.2089244967517764E-4 0.0 0.0 19.25740376268199 0.0 28 2.2089244967517764E-4 0.0 0.0 19.440302711013036 0.0 29 2.2089244967517764E-4 0.0 0.0 19.643744657163875 0.0 30 2.2089244967517764E-4 0.0 0.0 19.846744818415363 0.0 31 2.2089244967517764E-4 0.0 0.0 20.043118206176594 0.0 32 2.2089244967517764E-4 0.0 0.0 20.244130335381005 0.0 33 2.2089244967517764E-4 0.0 0.0 20.425703929014002 0.0 34 2.2089244967517764E-4 0.0 0.0 20.612358048989528 0.0 35 2.2089244967517764E-4 0.0 0.0 20.791943610575448 0.0 36 2.2089244967517764E-4 0.0 0.0 20.97903951545032 0.0 37 2.2089244967517764E-4 0.0 0.0 21.184469493648237 0.0 38 2.2089244967517764E-4 0.0 0.0 21.365380409932207 0.0 39 2.2089244967517764E-4 0.0 0.0 21.557998626048963 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAACA 20 7.0287497E-4 45.000004 33 CGGCGAA 50 2.1827873E-11 45.0 31 GCGAACC 25 3.8870465E-5 45.0 33 GCGATAG 25 3.8870465E-5 45.0 9 CGCCCTT 30 2.1625765E-6 44.999996 38 CGTTTTT 14560 0.0 44.58276 1 CGATGAA 425 0.0 43.941174 19 CCGATGA 435 0.0 42.931034 18 CGGGTAT 60 3.6379788E-12 41.249996 6 ATGAATG 475 0.0 41.210526 21 GTTTGCG 55 6.002665E-11 40.909092 1 TCTTGCG 55 6.002665E-11 40.909092 1 TCGTCTG 55 6.002665E-11 40.909092 1 GGCGAAC 55 6.002665E-11 40.909092 32 GATGAAT 490 0.0 40.408165 20 GTTTTTT 16370 0.0 40.326817 2 GCTTGCG 45 1.9239451E-8 40.0 1 CCCTTCG 40 3.4520235E-7 39.375004 40 GCTACGA 40 3.4520235E-7 39.375004 10 AGCTACG 40 3.4520235E-7 39.375004 9 >>END_MODULE