SRR2933655.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933655.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	455250
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28427	6.244261394838001	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC	2654	0.5829763866007688	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC	2577	0.5660626029654037	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCG	2566	0.5636463481603514	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAGTGCTT	1058	0.23239978034047226	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCC	1020	0.22405271828665568	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	632	0.13882482152663372	No Hit
GCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCTGC	625	0.1372872048325096	No Hit
GAACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCT	614	0.13487095002745744	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTC	585	0.12850082372322902	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCT	569	0.12498627127951675	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC	547	0.12015376166941241	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	528	0.11598023064250411	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	469	0.1030203185063152	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	468	0.10280065897858319	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGGG	20	7.0287916E-4	45.000004	3
CGGCGAA	20	7.0287916E-4	45.000004	31
GACCAAC	20	7.0287916E-4	45.000004	35
ATGCGCC	20	7.0287916E-4	45.000004	12
ATCGAAT	20	7.0287916E-4	45.000004	43
TACGAAT	75	0.0	45.0	12
CGAATGC	50	2.1827873E-11	45.0	45
GCTACGA	75	0.0	45.0	10
CGTTTTT	14550	0.0	44.365982	1
CGATGAA	430	0.0	43.430233	19
CCGATGA	425	0.0	42.88235	18
ACACGCG	100	0.0	42.75	36
CTACGAA	75	0.0	42.0	11
CGAATAT	75	0.0	42.0	14
AGCTACG	75	0.0	42.0	9
TCAAGCG	75	0.0	42.0	17
TACTGAC	70	0.0	41.785713	20
TATGGGC	60	3.6379788E-12	41.249996	4
TCGAATG	55	6.002665E-11	40.909092	44
GTTTGCG	45	1.9239451E-8	40.0	1