##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933655.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 455250 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.23338165842944 33.0 31.0 34.0 30.0 34.0 2 32.45935639758375 34.0 31.0 34.0 30.0 34.0 3 32.49442504118616 34.0 31.0 34.0 31.0 34.0 4 36.058403075233386 37.0 35.0 37.0 35.0 37.0 5 36.10209774848984 37.0 35.0 37.0 35.0 37.0 6 36.06336298736958 37.0 35.0 37.0 35.0 37.0 7 36.09316419549698 37.0 36.0 37.0 35.0 37.0 8 35.92748599670511 37.0 36.0 37.0 35.0 37.0 9 37.798701812191105 39.0 38.0 39.0 35.0 39.0 10 37.39032839099396 39.0 37.0 39.0 34.0 39.0 11 37.37879846238331 39.0 37.0 39.0 34.0 39.0 12 37.38720483250961 39.0 37.0 39.0 34.0 39.0 13 37.37771993410214 39.0 37.0 39.0 34.0 39.0 14 38.74070071389347 40.0 38.0 41.0 35.0 41.0 15 38.75360131795717 40.0 38.0 41.0 34.0 41.0 16 38.86095112575508 40.0 38.0 41.0 35.0 41.0 17 38.76051180669962 40.0 38.0 41.0 34.0 41.0 18 38.25934980779791 39.0 38.0 40.0 35.0 41.0 19 37.677979132344866 38.0 37.0 40.0 35.0 41.0 20 36.836382207578254 37.0 35.0 40.0 34.0 41.0 21 36.82385941790225 37.0 35.0 40.0 33.0 41.0 22 36.80569796814937 37.0 35.0 40.0 33.0 41.0 23 36.613111477210325 37.0 35.0 40.0 33.0 41.0 24 36.547800109829765 37.0 35.0 40.0 33.0 41.0 25 36.5266051619989 37.0 35.0 40.0 33.0 41.0 26 36.4546249313564 37.0 35.0 40.0 33.0 41.0 27 36.336419549697965 37.0 35.0 40.0 33.0 41.0 28 36.236248215266336 36.0 35.0 40.0 33.0 41.0 29 35.98793410214168 36.0 35.0 40.0 32.0 41.0 30 35.62105875892367 36.0 35.0 40.0 31.0 41.0 31 35.04955299286107 36.0 35.0 40.0 27.0 41.0 32 34.18641625480505 36.0 34.0 40.0 21.0 41.0 33 33.00895112575508 36.0 33.0 40.0 15.0 41.0 34 32.0590510708402 36.0 31.0 40.0 10.0 41.0 35 31.473570565623284 36.0 29.0 40.0 7.0 41.0 36 31.0896562328391 35.0 26.0 40.0 7.0 41.0 37 30.884538165842944 35.0 24.0 40.0 7.0 41.0 38 30.688718286655682 35.0 23.0 40.0 7.0 41.0 39 30.6042811641955 35.0 23.0 40.0 7.0 41.0 40 30.43772872048325 35.0 23.0 40.0 7.0 41.0 41 30.301752883031302 35.0 23.0 40.0 7.0 41.0 42 30.15926194398682 35.0 22.0 40.0 7.0 41.0 43 30.005249862712795 35.0 21.0 40.0 7.0 41.0 44 29.829399231191655 35.0 21.0 40.0 7.0 41.0 45 29.784252608456892 35.0 20.0 40.0 7.0 41.0 46 29.611198242723777 35.0 20.0 40.0 7.0 41.0 47 29.49691817682592 35.0 20.0 40.0 7.0 41.0 48 29.43086875343218 35.0 20.0 40.0 7.0 41.0 49 29.42318725974739 35.0 20.0 39.0 7.0 41.0 50 29.24473805601318 35.0 20.0 39.0 7.0 41.0 51 28.577605711147722 35.0 20.0 39.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 1.0 10 5.0 11 4.0 12 4.0 13 9.0 14 23.0 15 31.0 16 42.0 17 98.0 18 177.0 19 453.0 20 918.0 21 1703.0 22 2821.0 23 4469.0 24 7935.0 25 14809.0 26 23367.0 27 25279.0 28 21002.0 29 16274.0 30 13692.0 31 12935.0 32 13470.0 33 15506.0 34 21989.0 35 29712.0 36 37923.0 37 42411.0 38 72026.0 39 76125.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.34859967051071 3.902471169686985 31.05194947830862 42.69697968149369 2 47.54903898956617 7.76781987918726 33.18484349258649 11.498297638660077 3 14.682262493135639 7.686545853926415 64.17287204832509 13.45831960461285 4 11.977155409115872 3.7190554640307525 68.9996705107084 15.304118616144976 5 14.160131795716637 4.374739154310818 64.81823174080176 16.646897309170786 6 13.748929159802307 8.741790225151016 67.14069192751235 10.368588687534322 7 53.61427786930258 1.7520043931905545 41.718835804503016 2.9148819330038442 8 53.9389346512905 4.969577155409116 37.916529379461835 3.17495881383855 9 49.78912685337726 3.855903349807798 39.02998352553542 7.324986271279517 10 26.0390993959363 15.620208676551345 45.13585941790225 13.204832509610103 11 18.810323997803405 16.267764964305325 49.58418451400329 15.337726523887973 12 14.423503569467325 14.575288303130149 53.90291048874245 17.098297638660075 13 16.340252608456893 15.237561779242176 56.009665019220215 12.412520593080725 14 14.001537616694124 17.92597473915431 54.32070291048874 13.751784733662822 15 12.232839099395937 15.84843492586491 56.37298187808896 15.545744096650191 16 13.02559033498078 15.452608456891817 53.51828665568369 18.00351455244371 17 13.219769357495881 17.122020867655134 52.9331136738056 16.725096101043384 18 13.868423942888523 15.360571114772103 53.67358594179022 17.09741900054915 19 14.5447556287754 17.69906644700714 51.71466227347611 16.04151565074135 20 16.31828665568369 17.72674354750137 52.158813838550245 13.796155958264688 21 15.161559582646897 20.89555189456343 50.580560131795714 13.36232839099396 22 14.14936847885777 16.9166392092257 52.032289950576605 16.901702361339925 23 14.534870950027457 19.019879187259747 49.943767160900606 16.501482701812193 24 13.909280615046676 18.330587589236682 50.79912136188908 16.961010433827568 25 13.44843492586491 21.30345963756178 49.00626029654036 16.241845140032947 26 13.5554091158704 19.045799011532125 51.09851729818781 16.300274574409666 27 15.372872048325096 18.892037342119714 49.951235584843495 15.783855024711697 28 13.106864360241627 19.617353102690828 50.9838550247117 16.291927512355848 29 14.79143327841845 18.26820428336079 50.16474464579901 16.775617792421745 30 16.439538714991762 20.856013179571665 48.21943986820428 14.48500823723229 31 16.499725425590334 21.858539264140582 44.91136738056013 16.73036792970895 32 17.90269082921472 21.984184514003292 43.801208127402525 16.31191652937946 33 18.59857221306974 20.540582097748487 42.30971993410214 18.551125755079624 34 18.1111477210324 22.81867105985722 40.15420098846788 18.915980230642504 35 19.61317957166392 23.180669961559584 38.10829214717189 19.09785831960461 36 19.170126304228447 26.440637012630425 37.17298187808896 17.21625480505217 37 20.84437122460187 25.423613399231193 37.161559582646895 16.570455793520043 38 19.087095002745745 25.18879736408567 37.056342668863266 18.667764964305327 39 21.135420098846787 24.401537616694124 37.08929159802307 17.373750686436022 40 20.01954969796815 23.525315760571115 37.68654585392641 18.768588687534322 41 19.16968698517298 24.809006040637012 36.068753432180124 19.952553542009884 42 18.208896210873146 25.02207578253707 37.1780340472268 19.590993959362986 43 18.511806699615597 24.577265238879736 38.34464579901153 18.566282262493136 44 19.532784184514004 23.925535420098846 37.09873695771554 19.44294343767161 45 19.590554640307523 23.381438769906644 36.06809445359693 20.95991213618891 46 21.06798462383306 24.085447556287754 36.10873146622735 18.73783635365184 47 17.56836902800659 24.88478857770456 39.416144975288304 18.130697419000548 48 18.060186710598572 24.371444261394835 38.14870950027458 19.419659527732016 49 18.352333882482153 22.518176825919824 39.581109280615046 19.548380010982978 50 18.09445359692477 22.40241625480505 38.3890170236134 21.114113124656782 51 17.665238879736407 21.888632619439868 36.73014827018122 23.715980230642504 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 414.0 1 1115.0 2 1816.0 3 23406.0 4 44996.0 5 29268.0 6 13540.0 7 13013.0 8 12486.0 9 12281.0 10 12076.0 11 11838.0 12 11600.0 13 11093.0 14 10586.0 15 10022.0 16 9458.0 17 9002.0 18 8546.0 19 8064.0 20 7582.0 21 7145.5 22 6709.0 23 6436.5 24 6164.0 25 5899.0 26 5423.0 27 5212.0 28 5443.5 29 5675.0 30 5817.5 31 5960.0 32 6503.0 33 7046.0 34 7680.0 35 8314.0 36 8980.0 37 9646.0 38 10012.5 39 10379.0 40 11723.0 41 13067.0 42 14501.0 43 15935.0 44 17801.5 45 19668.0 46 27889.0 47 36110.0 48 34292.0 49 32474.0 50 31827.5 51 31181.0 52 27098.5 53 23016.0 54 20090.5 55 17165.0 56 15790.0 57 14415.0 58 13333.5 59 12252.0 60 11108.5 61 9965.0 62 9045.5 63 8126.0 64 7105.0 65 6084.0 66 4968.5 67 3853.0 68 3351.5 69 2850.0 70 2339.0 71 1828.0 72 1664.5 73 1501.0 74 1162.0 75 669.5 76 516.0 77 411.0 78 306.0 79 233.5 80 161.0 81 120.5 82 80.0 83 54.5 84 29.0 85 16.5 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 455250.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.83954940297651 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68221669545754 40.21165324934912 2 7.911282738779847 7.885895338006669 3 3.2355655419755514 4.837773860275768 4 1.9142164269475812 3.8161473671537256 5 1.3317783434839001 3.318761627194003 6 0.9528711160704094 2.849440023843632 7 0.7369771852472631 2.571142758309828 8 0.5785395283741536 2.3067319524782683 9 0.48049146018868655 2.155273008100412 >10 2.085966917558978 16.26322956471932 >50 0.0603585726335734 2.036979380369741 >100 0.02396590383962259 2.367886227248491 >500 0.0031066912384695947 0.9068971071199265 >1k 0.0022190651703354247 2.1842948616607987 >5k 0.0 0.0 >10k+ 4.43813034067085E-4 6.287893674170281 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28427 6.244261394838001 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC 2654 0.5829763866007688 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC 2577 0.5660626029654037 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCG 2566 0.5636463481603514 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAGTGCTT 1058 0.23239978034047226 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCC 1020 0.22405271828665568 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 632 0.13882482152663372 No Hit GCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCTGC 625 0.1372872048325096 No Hit GAACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCT 614 0.13487095002745744 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTC 585 0.12850082372322902 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCT 569 0.12498627127951675 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC 547 0.12015376166941241 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 528 0.11598023064250411 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 469 0.1030203185063152 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 468 0.10280065897858319 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.589785831960461E-4 0.0 0.0 0.08544755628775398 0.0 2 6.589785831960461E-4 0.0 0.0 0.40021965952773203 0.0 3 6.589785831960461E-4 0.0 0.0 0.5987918725974739 0.0 4 6.589785831960461E-4 0.0 0.0 1.0045030203185064 0.0 5 6.589785831960461E-4 0.0 0.0 2.2660076880834708 0.0 6 6.589785831960461E-4 0.0 0.0 3.2257001647446457 0.0 7 8.786381109280615E-4 0.0 0.0 4.0397583745194945 0.0 8 8.786381109280615E-4 0.0 0.0 5.172322899505766 0.0 9 8.786381109280615E-4 0.0 0.0 5.770455793520044 0.0 10 8.786381109280615E-4 0.0 0.0 7.381658429434377 0.0 11 8.786381109280615E-4 0.0 0.0 9.324766611751786 0.0 12 8.786381109280615E-4 0.0 0.0 11.581987918725975 0.0 13 8.786381109280615E-4 0.0 0.0 12.2332784184514 0.0 14 8.786381109280615E-4 0.0 0.0 12.496210873146623 0.0 15 8.786381109280615E-4 0.0 0.0 12.86853377265239 0.0 16 8.786381109280615E-4 0.0 0.0 13.59121361889072 0.0 17 8.786381109280615E-4 0.0 0.0 14.527622185612302 0.0 18 8.786381109280615E-4 0.0 0.0 15.367819879187259 0.0 19 8.786381109280615E-4 0.0 0.0 16.120153761669414 0.0 20 8.786381109280615E-4 0.0 0.0 16.592421746293244 0.0 21 8.786381109280615E-4 0.0 0.0 17.10291048874245 0.0 22 0.001098297638660077 0.0 0.0 17.574080175727623 0.0 23 0.001098297638660077 0.0 0.0 17.94552443712246 0.0 24 0.001098297638660077 0.0 0.0 18.22668863261944 0.0 25 0.001098297638660077 0.0 0.0 18.439538714991762 0.0 26 0.001098297638660077 0.0 0.0 18.623174080175726 0.0 27 0.0013179571663920922 0.0 0.0 18.81010433827567 0.0 28 0.0013179571663920922 0.0 0.0 18.99637561779242 0.0 29 0.0013179571663920922 0.0 0.0 19.176496430532673 0.0 30 0.0013179571663920922 0.0 0.0 19.378143876990663 0.0 31 0.0013179571663920922 0.0 0.0 19.565074135090608 0.0 32 0.0013179571663920922 0.0 0.0 19.771334431630972 0.0 33 0.0013179571663920922 0.0 0.0 19.958045030203184 0.0 34 0.0013179571663920922 0.0 0.0 20.137726523887974 0.0 35 0.0013179571663920922 0.0 0.0 20.324437122460186 0.0 36 0.0015376166941241077 0.0 0.0 20.506315211422294 0.0 37 0.0015376166941241077 0.0 0.0 20.694343767160902 0.0 38 0.0015376166941241077 0.0 0.0 20.88061504667765 0.0 39 0.0015376166941241077 0.0 0.0 21.085118066996156 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 20 7.0287916E-4 45.000004 3 CGGCGAA 20 7.0287916E-4 45.000004 31 GACCAAC 20 7.0287916E-4 45.000004 35 ATGCGCC 20 7.0287916E-4 45.000004 12 ATCGAAT 20 7.0287916E-4 45.000004 43 TACGAAT 75 0.0 45.0 12 CGAATGC 50 2.1827873E-11 45.0 45 GCTACGA 75 0.0 45.0 10 CGTTTTT 14550 0.0 44.365982 1 CGATGAA 430 0.0 43.430233 19 CCGATGA 425 0.0 42.88235 18 ACACGCG 100 0.0 42.75 36 CTACGAA 75 0.0 42.0 11 CGAATAT 75 0.0 42.0 14 AGCTACG 75 0.0 42.0 9 TCAAGCG 75 0.0 42.0 17 TACTGAC 70 0.0 41.785713 20 TATGGGC 60 3.6379788E-12 41.249996 4 TCGAATG 55 6.002665E-11 40.909092 44 GTTTGCG 45 1.9239451E-8 40.0 1 >>END_MODULE