SRR2933654.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933654.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	720360
Sequences flagged as poor quality	0
Sequence length	51
%GC	34

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31118	4.31978455216836	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCAAAGCTCGTATGCC	1805	0.25056915986451217	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCAAAGCTCGTATGC	1069	0.1483980232106169	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	795	0.11036148592370482	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCTACG	20	7.031531E-4	45.000004	1
CGTTGAT	20	7.031531E-4	45.000004	25
TATTGCG	40	6.8084773E-9	45.000004	1
AGTGCGG	40	6.8084773E-9	45.000004	2
TCGGACC	20	7.031531E-4	45.000004	5
TAGTGCG	20	7.031531E-4	45.000004	1
ATCTCCG	25	3.8893508E-5	45.0	1
TTCACGG	25	3.8893508E-5	45.0	2
TGCGGAT	25	3.8893508E-5	45.0	4
ACGGGTA	25	3.8893508E-5	45.0	5
CTGCGGC	25	3.8893508E-5	45.0	3
CTGCGCG	25	3.8893508E-5	45.0	1
TGCGTAG	25	3.8893508E-5	45.0	1
CGTTTTT	24615	0.0	44.424133	1
TCAAGCG	50	1.0804797E-9	40.5	17
GCGTAGG	50	1.0804797E-9	40.5	2
GTTTTTT	27600	0.0	40.116848	2
TTGCGGA	45	1.9266736E-8	40.0	3
CGGGTGG	80	0.0	39.375004	6
TGGCGCG	40	3.4558252E-7	39.375004	1