##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933654.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 720360 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.50900660780721 34.0 31.0 34.0 31.0 34.0 2 32.71915708812261 34.0 31.0 34.0 31.0 34.0 3 32.72977400188795 34.0 31.0 34.0 31.0 34.0 4 36.22934782608696 37.0 37.0 37.0 35.0 37.0 5 36.250764895330114 37.0 37.0 37.0 35.0 37.0 6 36.24404603253929 37.0 37.0 37.0 35.0 37.0 7 36.32498750624688 37.0 37.0 37.0 35.0 37.0 8 36.24514131822978 37.0 37.0 37.0 35.0 37.0 9 38.08394552723638 39.0 39.0 39.0 37.0 39.0 10 37.40176856016436 39.0 37.0 39.0 34.0 39.0 11 37.4071464267866 39.0 37.0 39.0 34.0 39.0 12 37.51519101560331 39.0 37.0 39.0 35.0 39.0 13 37.5554333944139 39.0 37.0 39.0 35.0 39.0 14 38.96020461991227 40.0 38.0 41.0 35.0 41.0 15 38.983143150646896 40.0 38.0 41.0 35.0 41.0 16 38.99845910378144 40.0 38.0 41.0 35.0 41.0 17 38.95562496529513 40.0 38.0 41.0 35.0 41.0 18 38.35640235437837 39.0 38.0 40.0 35.0 41.0 19 37.72711977344661 38.0 37.0 40.0 35.0 41.0 20 37.02213615414515 37.0 35.0 40.0 34.0 41.0 21 36.929307568438006 37.0 35.0 40.0 33.0 41.0 22 36.92160031095563 37.0 35.0 40.0 33.0 41.0 23 36.84841051696374 37.0 35.0 40.0 33.0 41.0 24 36.73881114998056 37.0 35.0 40.0 33.0 41.0 25 36.663651507579544 37.0 35.0 40.0 33.0 41.0 26 36.601282691987336 37.0 35.0 40.0 33.0 41.0 27 36.51360430895663 37.0 35.0 40.0 33.0 41.0 28 36.34347548447998 37.0 35.0 40.0 33.0 41.0 29 36.11252568160364 37.0 35.0 40.0 32.0 41.0 30 35.75019018268643 37.0 35.0 40.0 31.0 41.0 31 35.09760397578988 37.0 35.0 40.0 25.0 41.0 32 34.06119995557777 37.0 34.0 40.0 18.0 41.0 33 32.75224609917264 37.0 33.0 40.0 12.0 41.0 34 31.629426953190073 37.0 29.0 40.0 7.0 41.0 35 30.895646621133878 37.0 23.0 40.0 7.0 41.0 36 30.502661169415294 37.0 21.0 40.0 7.0 41.0 37 30.24982369926148 36.0 21.0 40.0 7.0 41.0 38 30.09961824643234 36.0 20.0 40.0 7.0 41.0 39 29.967578710644677 36.0 18.0 40.0 7.0 41.0 40 29.839769004386696 36.0 18.0 40.0 7.0 41.0 41 29.726564495530013 36.0 18.0 40.0 7.0 41.0 42 29.618243655949804 36.0 18.0 40.0 7.0 41.0 43 29.478267810539176 36.0 18.0 40.0 7.0 41.0 44 29.31588094841468 35.0 18.0 40.0 7.0 41.0 45 29.276166083624855 35.0 18.0 40.0 7.0 41.0 46 29.107126992059527 35.0 18.0 40.0 7.0 41.0 47 28.99570492531512 35.0 17.0 40.0 7.0 41.0 48 28.906281581431507 35.0 17.0 40.0 7.0 41.0 49 28.881012271641957 35.0 17.0 40.0 7.0 41.0 50 28.789172080626354 35.0 15.0 40.0 7.0 41.0 51 28.049509967238603 35.0 15.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 6.0 12 4.0 13 0.0 14 11.0 15 19.0 16 50.0 17 130.0 18 309.0 19 692.0 20 1257.0 21 2142.0 22 3726.0 23 6797.0 24 13946.0 25 30286.0 26 46835.0 27 46300.0 28 34151.0 29 24612.0 30 19122.0 31 17047.0 32 17869.0 33 20325.0 34 28524.0 35 37342.0 36 47149.0 37 63717.0 38 117279.0 39 140661.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 16.82811372091732 3.520600810705758 35.58234771503137 44.06893775334555 2 48.923871397634514 3.4280082181131655 35.35676606141374 12.29135432283858 3 14.500388694541618 3.415098006552279 68.44383363873618 13.640679660169916 4 11.187739463601533 3.650258204231218 69.29021600310956 15.871786329057693 5 10.84416125270698 4.366566716641679 69.4727636181909 15.316508412460436 6 13.622216669443057 5.002082292187239 71.30809595202399 10.067605086345715 7 56.594341718029874 1.2622855239047144 39.66016991504248 2.483202843022933 8 58.06180243211727 1.409295352323838 38.18077072574824 2.3481314898106502 9 53.984951968460216 3.5294852573713142 39.48414681548115 3.001415958687323 10 23.051668610139377 16.53645399522461 48.269754011882945 12.142123382753066 11 17.0338441890166 19.470403687045366 49.54800377588983 13.947748348048197 12 13.636653895274584 16.93444944194569 55.039563551557556 14.389333111222166 13 14.884641012826918 17.486950968959963 55.80515297906602 11.823255039147092 14 14.832861347104226 17.980593036814927 54.86728857793326 12.319257038147594 15 13.201732467099783 18.694958076517295 55.55277916597257 12.55053029041035 16 13.171469820645232 17.862041201621413 54.58409684046865 14.382392137264702 17 13.500333166749959 18.008912210561387 53.6448442445444 14.84591037814426 18 14.297018157587873 16.926536731634183 54.89338664001333 13.883058470764617 19 14.718890554722638 19.480537509023264 53.0275140207674 12.773057915486701 20 15.18449108778944 19.100033316674995 52.6418735076906 13.073602087844966 21 14.897828863346104 20.047615081348212 52.48500749625188 12.569548559053805 22 14.091842967405185 18.993697595646623 52.24943084013549 14.665028596812704 23 12.90882336609473 20.23668721194958 51.432478205341766 15.422011216613916 24 12.959353656505082 19.431534232883557 52.563162863012934 15.045949247598422 25 12.936864900882892 21.156782719751234 51.10639124882004 14.799961130545839 26 12.980593036814925 20.873868621244934 52.211810761286024 13.933727580654118 27 13.235326781053919 20.39272030651341 52.091315453384425 14.280637459048254 28 13.041257149203176 19.415292353823087 52.23749236492865 15.305958132045088 29 13.391221056138598 19.086290188239214 51.55269587428508 15.969792881337108 30 14.53648175912044 19.753734243989115 50.457965461713584 15.251818535176856 31 13.969404186795492 21.72469320895108 48.0266811038925 16.27922150036093 32 13.59736798267533 21.887528457993223 47.003859181520355 17.511244377811096 33 14.963906935421178 23.00599700149925 43.28335832083958 18.74673774223999 34 15.147426286856572 23.990227108667888 40.81264923094008 20.049697373535455 35 15.920511966239104 25.083152868010437 38.798933866400134 20.197401299350325 36 16.695679937808876 26.13179521350436 36.77952690321506 20.39299794547171 37 16.477733355544448 27.811788550169357 35.4045199622411 20.305958132045088 38 17.18224221222722 28.479926703315012 34.868260314287305 19.46957077017047 39 17.8135932033983 28.74104614359487 34.44944194569382 18.995918707313013 40 18.382614248431338 28.345549447498474 34.99458604031317 18.27725026375701 41 18.648731189960575 27.27913820867344 34.70792381586985 19.36420678549614 42 18.558637347992672 26.39111000055528 34.63226719973347 20.417985451718586 43 17.51596424010217 26.025320672996834 35.93425509467488 20.52445999222611 44 17.3178688433561 26.875867621744682 35.051502026764396 20.754761508134823 45 18.281553667610638 27.033011272141707 34.349075462268864 20.336359597978788 46 18.794908101504802 26.989421955688826 34.52051751901827 19.695152423788105 47 17.606752179465822 27.52790271530901 35.28513521017269 19.580209895052477 48 17.38269754011883 26.382503192848024 35.84596590593592 20.38883336109723 49 18.64928646787717 25.63121217169193 35.47170859014937 20.247792770281524 50 17.6925426175801 25.36204120162141 35.10883447165306 21.836581709145428 51 17.367427397412406 25.00735743239491 34.34463323893609 23.280581931256595 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 263.0 1 897.0 2 1531.0 3 26301.5 4 51072.0 5 35324.0 6 19576.0 7 19427.5 8 19279.0 9 19615.5 10 19952.0 11 20043.0 12 20134.0 13 19748.0 14 19362.0 15 18682.5 16 18003.0 17 17369.0 18 16735.0 19 16140.5 20 15546.0 21 14756.0 22 13966.0 23 13371.0 24 12776.0 25 12354.5 26 11914.5 27 11896.0 28 12139.5 29 12383.0 30 12834.5 31 13286.0 32 14518.5 33 15751.0 34 17189.5 35 18628.0 36 20725.5 37 22823.0 38 23601.0 39 24379.0 40 26141.0 41 27903.0 42 30726.0 43 33549.0 44 36311.5 45 39074.0 46 43153.0 47 47232.0 48 50107.0 49 52982.0 50 50363.0 51 47744.0 52 41588.5 53 35433.0 54 30013.5 55 24594.0 56 20934.5 57 17275.0 58 14989.5 59 12704.0 60 10771.0 61 8838.0 62 7247.5 63 5657.0 64 4623.5 65 3590.0 66 2754.0 67 1918.0 68 1429.0 69 940.0 70 761.5 71 583.0 72 509.5 73 436.0 74 364.5 75 212.5 76 132.0 77 118.0 78 104.0 79 77.5 80 51.0 81 46.0 82 41.0 83 25.0 84 9.0 85 5.5 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 720360.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.964974262410834 #Duplication Level Percentage of deduplicated Percentage of total 1 80.5544394102511 41.054549312663795 2 7.731255256998394 7.880464503781033 3 3.2820537250194994 5.018093508704052 4 1.9135825189466091 3.9010273530845287 5 1.3580974135300852 3.4607699863203756 6 0.9612023781684538 2.9392592678593994 7 0.7484807192507174 2.670241041476649 8 0.5785312755759444 2.358786525578217 9 0.49371295082413946 2.264586104859405 >10 2.287689176789883 18.543442896721597 >50 0.06345079857575854 2.2258866008174194 >100 0.024508849962911024 2.2679363558174086 >500 0.002178564441122768 0.697271418612783 >1k 5.44641110280692E-4 0.39887700180993996 >5k 0.0 0.0 >10k+ 2.72320555140346E-4 4.3188081218934276 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31118 4.31978455216836 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCAAAGCTCGTATGCC 1805 0.25056915986451217 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCAAAGCTCGTATGC 1069 0.1483980232106169 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 795 0.11036148592370482 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7763895829862847E-4 0.0 0.0 0.10578044311177745 0.0 2 2.7763895829862847E-4 0.0 0.0 0.34121827974901436 0.0 3 2.7763895829862847E-4 0.0 0.0 0.5512521517019268 0.0 4 2.7763895829862847E-4 0.0 0.0 0.840274307290799 0.0 5 2.7763895829862847E-4 0.0 0.0 1.4624632128380255 0.0 6 2.7763895829862847E-4 0.0 0.0 2.285801543672608 0.0 7 2.7763895829862847E-4 0.0 0.0 2.974762618690655 0.0 8 2.7763895829862847E-4 0.0 0.0 3.972180576378477 0.0 9 2.7763895829862847E-4 0.0 0.0 4.527319673496585 0.0 10 2.7763895829862847E-4 0.0 0.0 5.46351824087956 0.0 11 2.7763895829862847E-4 0.0 0.0 7.310650230440335 0.0 12 2.7763895829862847E-4 0.0 0.0 8.83391637514576 0.0 13 2.7763895829862847E-4 0.0 0.0 9.433061247154201 0.0 14 2.7763895829862847E-4 0.0 0.0 9.668637903270588 0.0 15 2.7763895829862847E-4 0.0 0.0 9.92698095396746 0.0 16 2.7763895829862847E-4 0.0 0.0 10.535982008995502 0.0 17 2.7763895829862847E-4 0.0 0.0 11.380698539619079 0.0 18 2.7763895829862847E-4 0.0 0.0 12.199594647120884 0.0 19 2.7763895829862847E-4 0.0 0.0 12.713920817369093 0.0 20 2.7763895829862847E-4 0.0 0.0 13.159531345438392 0.0 21 2.7763895829862847E-4 0.0 0.0 13.69634627130879 0.0 22 2.7763895829862847E-4 0.0 0.0 14.198039868954412 0.0 23 2.7763895829862847E-4 0.0 0.0 14.620467544005775 0.0 24 2.7763895829862847E-4 0.0 0.0 14.906435671053362 0.0 25 2.7763895829862847E-4 0.0 0.0 15.146593369981677 0.0 26 2.7763895829862847E-4 0.0 0.0 15.345660503081792 0.0 27 2.7763895829862847E-4 0.0 0.0 15.548198123160642 0.0 28 2.7763895829862847E-4 0.0 0.0 15.733244488866678 0.0 29 4.164584374479427E-4 0.0 0.0 15.92120606363485 0.0 30 6.940973957465711E-4 0.0 0.0 16.126658892775833 0.0 31 6.940973957465711E-4 0.0 0.0 16.312676994835915 0.0 32 8.329168748958854E-4 1.3881947914931423E-4 0.0 16.50785718251985 0.0 33 8.329168748958854E-4 1.3881947914931423E-4 0.0 16.697901049475263 0.0 34 8.329168748958854E-4 1.3881947914931423E-4 0.0 16.88822255538897 0.0 35 8.329168748958854E-4 1.3881947914931423E-4 0.0 17.0650785718252 0.0 36 8.329168748958854E-4 1.3881947914931423E-4 0.0 17.262202232217223 0.0 37 8.329168748958854E-4 1.3881947914931423E-4 0.0 17.46362929646288 0.0 38 8.329168748958854E-4 1.3881947914931423E-4 0.0 17.673663168415793 0.0 39 8.329168748958854E-4 1.3881947914931423E-4 0.0 17.88022655338997 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCTACG 20 7.031531E-4 45.000004 1 CGTTGAT 20 7.031531E-4 45.000004 25 TATTGCG 40 6.8084773E-9 45.000004 1 AGTGCGG 40 6.8084773E-9 45.000004 2 TCGGACC 20 7.031531E-4 45.000004 5 TAGTGCG 20 7.031531E-4 45.000004 1 ATCTCCG 25 3.8893508E-5 45.0 1 TTCACGG 25 3.8893508E-5 45.0 2 TGCGGAT 25 3.8893508E-5 45.0 4 ACGGGTA 25 3.8893508E-5 45.0 5 CTGCGGC 25 3.8893508E-5 45.0 3 CTGCGCG 25 3.8893508E-5 45.0 1 TGCGTAG 25 3.8893508E-5 45.0 1 CGTTTTT 24615 0.0 44.424133 1 TCAAGCG 50 1.0804797E-9 40.5 17 GCGTAGG 50 1.0804797E-9 40.5 2 GTTTTTT 27600 0.0 40.116848 2 TTGCGGA 45 1.9266736E-8 40.0 3 CGGGTGG 80 0.0 39.375004 6 TGGCGCG 40 3.4558252E-7 39.375004 1 >>END_MODULE