##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933650.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 93272 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.009413328758896 33.0 31.0 34.0 30.0 34.0 2 32.20928038425251 34.0 31.0 34.0 30.0 34.0 3 32.31598979329274 34.0 31.0 34.0 30.0 34.0 4 35.88687923492581 37.0 35.0 37.0 35.0 37.0 5 35.911366755296335 37.0 35.0 37.0 35.0 37.0 6 35.86265974783429 37.0 35.0 37.0 35.0 37.0 7 35.91092718071876 37.0 35.0 37.0 35.0 37.0 8 35.71271121022386 37.0 35.0 37.0 35.0 37.0 9 37.545758641392915 39.0 37.0 39.0 35.0 39.0 10 37.06806973153787 39.0 37.0 39.0 33.0 39.0 11 37.068219830174115 39.0 37.0 39.0 33.0 39.0 12 37.05814177888327 39.0 37.0 39.0 33.0 39.0 13 37.00712968522172 39.0 37.0 39.0 33.0 39.0 14 37.93708722875032 40.0 37.0 41.0 33.0 41.0 15 38.00492109100266 40.0 37.0 41.0 33.0 41.0 16 38.121483403379365 40.0 37.0 41.0 33.0 41.0 17 38.08706793035423 40.0 37.0 41.0 33.0 41.0 18 37.84345784372588 39.0 37.0 40.0 33.0 41.0 19 37.50473882837293 39.0 37.0 40.0 33.0 41.0 20 37.084644909511965 38.0 35.0 40.0 33.0 41.0 21 36.928842525087916 38.0 35.0 40.0 33.0 41.0 22 36.988785487606144 38.0 35.0 40.0 33.0 41.0 23 36.97930783086028 38.0 35.0 40.0 33.0 41.0 24 36.89579938245132 38.0 35.0 40.0 33.0 41.0 25 36.793989621751436 38.0 35.0 40.0 33.0 41.0 26 36.665741058409814 38.0 35.0 40.0 32.0 41.0 27 36.569742259198904 38.0 35.0 40.0 32.0 41.0 28 36.46810403979758 38.0 35.0 40.0 32.0 41.0 29 36.36210223861394 38.0 35.0 40.0 31.0 41.0 30 36.212078651685395 38.0 35.0 40.0 31.0 41.0 31 35.81028604511536 38.0 35.0 40.0 30.0 41.0 32 35.34193541470109 38.0 35.0 40.0 27.0 41.0 33 34.93390299339566 38.0 35.0 40.0 24.0 41.0 34 34.52851874088687 38.0 34.0 40.0 21.0 41.0 35 34.12903122051634 38.0 34.0 40.0 18.0 41.0 36 33.89936958572776 38.0 33.0 40.0 18.0 41.0 37 33.719572862166565 38.0 33.0 40.0 17.0 41.0 38 33.54921091002659 37.0 33.0 40.0 15.0 41.0 39 33.521775023586926 37.0 33.0 40.0 15.0 41.0 40 33.276578179946824 37.0 33.0 40.0 15.0 41.0 41 33.05758426966292 37.0 32.0 40.0 15.0 41.0 42 32.90491251393773 37.0 32.0 40.0 14.0 41.0 43 32.833058152500215 37.0 32.0 40.0 12.0 41.0 44 32.649391028390085 36.0 31.0 40.0 11.0 41.0 45 32.58562055064757 36.0 31.0 40.0 10.0 41.0 46 32.175883437687624 35.0 31.0 40.0 10.0 41.0 47 31.8803713869114 35.0 30.0 39.0 10.0 41.0 48 31.88289089973411 35.0 30.0 39.0 10.0 41.0 49 31.979908225405268 35.0 31.0 39.0 10.0 41.0 50 31.88087528947594 35.0 30.0 39.0 10.0 41.0 51 30.65171755725191 35.0 27.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 1.0 11 3.0 12 2.0 13 4.0 14 3.0 15 7.0 16 16.0 17 19.0 18 40.0 19 77.0 20 143.0 21 215.0 22 324.0 23 534.0 24 949.0 25 1665.0 26 2324.0 27 2756.0 28 2721.0 29 2649.0 30 2661.0 31 2872.0 32 3251.0 33 4093.0 34 6110.0 35 7729.0 36 9747.0 37 12088.0 38 18072.0 39 12193.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.58538468136204 5.405695171112445 39.02993395660005 29.978986190925465 2 37.25555364954113 4.574792006175487 38.5903593790205 19.579294965262886 3 19.91272836435372 5.462518226262972 55.54721674243074 19.077536666952568 4 14.931597907196156 5.629770992366412 56.400634702804695 23.037996397632728 5 13.212968522171714 6.462818423535466 56.732995968779484 23.59121708551334 6 17.58941590187838 7.473839951968436 61.22630585813534 13.71043828801784 7 64.7461188781199 2.877605283471996 27.664250793378503 4.71202504502959 8 63.41238528175658 2.9966120593532892 27.309374731966724 6.281627926923407 9 58.252208594219056 5.3413671841495844 29.809589158589933 6.596835063041427 10 29.426837636160908 19.793721588472422 35.71382622866455 15.065614546702118 11 21.300068616519425 17.477914057809418 39.617462904194184 21.60455442147697 12 17.922849300969208 15.239300111501844 45.79938245132516 21.038468136203793 13 21.895102495925894 16.02946221802899 47.85680590102067 14.218629385024444 14 19.042156274122995 17.441461531863798 47.29393601509563 16.222446178917576 15 14.562784115275754 16.42400720473454 48.51187923492581 20.5013294450639 16 15.69602881893816 16.47439746118878 45.52920490608114 22.30036881379192 17 14.758984475512479 17.275280898876407 44.10648426108585 23.85925036452526 18 16.91182777253624 15.044171884381166 46.30006861651943 21.74393172656317 19 15.953340766789603 18.485719186894244 47.147053778197105 18.41388626811905 20 16.22459044514967 22.48477570975212 44.050733339051376 17.239900506046833 21 15.434428338622524 22.924350287331674 45.25152242902479 16.389698945021014 22 13.223689853332191 20.237584698516166 43.781627926923406 22.757097521228236 23 13.442405009005917 21.974440346513425 41.51728278583069 23.06587185864997 24 14.544557852302942 22.295008148211682 40.836478257140406 22.32395574234497 25 15.02808988764045 23.401449523972897 38.06501415215713 23.505446436229523 26 13.13041427223604 24.927094948108756 39.68929582296938 22.253194956685824 27 15.701389484518396 22.41723132344112 42.172356119735824 19.709023072304657 28 12.267347113817651 22.511579037653316 41.73707007462046 23.48400377390857 29 14.826528861823485 21.273265288618234 40.074191611630496 23.82601423792778 30 22.20816536581182 20.850844840895448 38.52924779140578 18.411742001886957 31 20.919461360322497 27.166781027532377 33.08924436057981 18.824513251565314 32 17.445750064327985 26.632858735740626 33.021699974268806 22.89969122566258 33 20.95484175315207 21.188566772450468 30.980358521314006 26.876232953083456 34 19.565357234754266 23.160219572862168 32.75152242902479 24.52290076335878 35 18.808431254824598 27.26756154044086 30.417488635388967 23.50651856934557 36 23.65447293936015 28.798567630156963 27.294364868342054 20.252594562140835 37 23.06479972553392 28.090959773565487 29.580152671755727 19.264087829144867 38 18.35063041427224 27.558109614889787 33.071018097606995 21.02024187323098 39 21.044900934900078 20.0606827343683 31.592546530577238 27.30186980015439 40 25.2787546101724 21.56274122995111 29.668067587271636 23.490436572604857 41 22.2864310832833 26.91054121279698 26.59104554421477 24.21198215970495 42 20.762929925379538 27.04991851788318 28.711724847757097 23.475426708980187 43 19.8987906338451 21.079209194613604 33.996268976756156 25.025731194785145 44 20.25152242902479 20.963418818080452 33.003473711295996 25.781585041598763 45 23.819581439231495 17.65803242130543 30.97070932326958 27.5516768161935 46 25.52212882751522 19.437773393944592 33.318680847414015 21.72141693112617 47 18.70121794321983 24.817737370271892 36.56831632215456 19.91272836435372 48 17.50471738571061 23.71558452697487 36.75915601681105 22.020542070503474 49 22.299296680675873 18.33347628441547 37.16335020156102 22.20387683334763 50 21.937987820567802 16.257826571747145 34.3211253109186 27.48306029676645 51 20.05103353632387 16.253538039282958 31.214083540612403 32.48134488378077 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 271.0 1 544.0 2 817.0 3 3644.5 4 6472.0 5 3997.5 6 1523.0 7 1389.5 8 1256.0 9 1230.0 10 1204.0 11 1187.0 12 1170.0 13 1112.5 14 1055.0 15 969.5 16 884.0 17 820.0 18 756.0 19 692.5 20 629.0 21 577.5 22 526.0 23 536.0 24 546.0 25 560.5 26 611.5 27 648.0 28 638.0 29 628.0 30 663.5 31 699.0 32 761.5 33 824.0 34 897.5 35 971.0 36 1031.5 37 1092.0 38 1246.0 39 1400.0 40 1755.5 41 2111.0 42 2497.0 43 2883.0 44 3520.5 45 4158.0 46 5711.0 47 7264.0 48 9461.5 49 11659.0 50 12095.5 51 12532.0 52 10921.5 53 9311.0 54 7319.0 55 5327.0 56 4272.5 57 3218.0 58 2810.0 59 2402.0 60 2180.5 61 1959.0 62 1815.0 63 1671.0 64 1594.5 65 1518.0 66 1270.5 67 1023.0 68 870.5 69 718.0 70 607.5 71 497.0 72 440.5 73 384.0 74 363.0 75 270.0 76 198.0 77 135.0 78 72.0 79 57.0 80 42.0 81 32.0 82 22.0 83 14.5 84 7.0 85 5.0 86 3.0 87 1.5 88 0.0 89 1.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 93272.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.48897847156704 #Duplication Level Percentage of deduplicated Percentage of total 1 79.538638582787 48.9074963547474 2 11.650857860231552 14.327986962861308 3 4.231761751987725 7.806201217943219 4 1.727925791602734 4.249935672013037 5 0.8264751011298647 2.5409554850330216 6 0.4638024829125401 1.7111244532121108 7 0.34349281629236994 1.4784715670297623 8 0.21969591295857163 1.08071018097607 9 0.13600223183149673 0.7526374474654773 >10 0.80729529920491 8.827944077536667 >50 0.03661598549309527 1.6403636675529636 >100 0.015692565211326545 2.270777939789004 >500 0.0 0.0 >1k 0.0017436183568140605 4.405394973839952 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4109 4.405394973839952 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCC 386 0.41384338279440774 No Hit CCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 311 0.33343339909083114 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGCT 304 0.3259284672784973 TruSeq Adapter, Index 14 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 265 0.28411527575263745 TruSeq Adapter, Index 21 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 222 0.23801355176258687 TruSeq Adapter, Index 21 (95% over 21bp) TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 189 0.20263315893301312 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGC 182 0.19512822712067932 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 144 0.15438716871086713 No Hit TTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGG 115 0.12329530834548418 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3795351230808817 0.0 2 0.0 0.0 0.0 1.3980615833261858 0.0 3 0.0 0.0 0.0 2.0156102581696542 0.0 4 0.0 0.0 0.0 2.921562741229951 0.0 5 0.0 0.0 0.0 4.923235268890985 0.0 6 0.0 0.0 0.0 6.607556394201904 0.0 7 0.0 0.0 0.0 8.000257311947852 0.0 8 0.0 0.006432798696286131 0.0 10.238871258255426 0.0 9 0.0 0.006432798696286131 0.0 11.248820653572347 0.0 10 0.0 0.006432798696286131 0.0 13.639677502358692 0.0 11 0.0 0.006432798696286131 0.0 19.516039111416074 0.0 12 0.0 0.006432798696286131 0.0 24.771635646281844 0.0 13 0.0 0.006432798696286131 0.0 26.564242216313577 0.0 14 0.0 0.006432798696286131 0.0 27.187151556737284 0.0 15 0.0 0.006432798696286131 0.0 28.065228578780342 0.0 16 0.0 0.006432798696286131 0.0 30.048674843468564 0.0 17 0.0 0.006432798696286131 0.0 32.52744660777082 0.0 18 0.0 0.006432798696286131 0.0 34.841109872201734 0.0 19 0.0 0.006432798696286131 0.0 36.08907281928124 0.0 20 0.0 0.006432798696286131 0.0 37.259842182005315 0.0 21 0.0 0.006432798696286131 0.0 38.588215112788404 0.0 22 0.0 0.006432798696286131 0.0 39.70430568659405 0.0 23 0.0 0.006432798696286131 0.0 40.45372673471138 0.0 24 0.0 0.006432798696286131 0.0 40.902950510335366 0.0 25 0.0 0.006432798696286131 0.0 41.19778711724848 0.0 26 0.0 0.006432798696286131 0.0 41.42186293850244 0.0 27 0.0 0.006432798696286131 0.0 41.64272236040827 0.0 28 0.0 0.006432798696286131 0.0 41.817480058324044 0.0 29 0.0 0.006432798696286131 0.0 42.03726734711382 0.0 30 0.0 0.006432798696286131 0.0 42.25383823655545 0.0 31 0.0 0.006432798696286131 0.0 42.408225405266315 0.0 32 0.0 0.006432798696286131 0.0 42.57011750578952 0.0 33 0.0 0.006432798696286131 0.0 42.728793206964575 0.0 34 0.0 0.006432798696286131 0.0 42.864954112702634 0.0 35 0.0 0.006432798696286131 0.0 43.046144609314695 0.0 36 0.0 0.006432798696286131 0.0 43.21446950853418 0.0 37 0.0 0.006432798696286131 0.0 43.34848614804014 0.0 38 0.0010721331160476885 0.006432798696286131 0.0 43.51466678102753 0.0 39 0.0010721331160476885 0.006432798696286131 0.0 43.93708722875032 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCAT 30 2.1440374E-6 45.000004 17 CGCGGGA 35 1.1959492E-7 45.000004 4 GCACCGA 30 2.1440374E-6 45.000004 9 ATTCCTC 30 2.1440374E-6 45.000004 11 TGTATGG 35 1.1959492E-7 45.000004 2 GGGTGTC 30 2.1440374E-6 45.000004 7 TGCGGGA 30 2.1440374E-6 45.000004 4 CATGAAC 20 6.9999555E-4 45.0 20 GGCACGT 20 6.9999555E-4 45.0 11 GGCATGA 20 6.9999555E-4 45.0 18 CGGGGCT 20 6.9999555E-4 45.0 6 CACGTGG 20 6.9999555E-4 45.0 13 ACCACAG 20 6.9999555E-4 45.0 35 GGACTAA 20 6.9999555E-4 45.0 8 ACACTTG 20 6.9999555E-4 45.0 25 TGTTAGG 25 3.8632035E-5 45.0 2 GCACGTG 20 6.9999555E-4 45.0 12 CGGGAGG 45 3.765308E-10 45.0 6 TCGTTCA 25 3.8632035E-5 45.0 16 AGGCACG 20 6.9999555E-4 45.0 10 >>END_MODULE