SRR2933649.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933649.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	93895
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4158	4.428350817402418	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCC	363	0.38660205548751264	No Hit
CCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC	330	0.35145641407955697	TruSeq Adapter, Index 21 (95% over 21bp)
CTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGCT	317	0.3376111614036956	TruSeq Adapter, Index 14 (95% over 23bp)
GCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC	248	0.2641248202779701	TruSeq Adapter, Index 21 (95% over 21bp)
TCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC	217	0.2311092177432238	TruSeq Adapter, Index 21 (95% over 21bp)
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGC	199	0.21193886788433888	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	188	0.20022365408168696	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	151	0.16081793492731242	No Hit
TTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGG	128	0.1363224878854039	No Hit
TCCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTG	106	0.11289206028010013	TruSeq Adapter, Index 14 (95% over 21bp)
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	96	0.10224186591405293	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATTTGG	35	1.1960583E-7	45.000004	2
GGGCTTG	35	1.1960583E-7	45.000004	1
CGCGACC	20	7.0001866E-4	45.0	10
CAAGAGA	20	7.0001866E-4	45.0	42
ACGCCGG	20	7.0001866E-4	45.0	27
GGGCAAC	20	7.0001866E-4	45.0	7
GCGACCT	20	7.0001866E-4	45.0	11
GGGTACG	20	7.0001866E-4	45.0	7
GGACTAA	20	7.0001866E-4	45.0	8
GGCGATT	20	7.0001866E-4	45.0	8
GGACATG	25	3.8633956E-5	45.0	8
GCGCGAC	20	7.0001866E-4	45.0	9
CTAGGGG	40	6.701157E-9	45.0	4
ACACAGA	20	7.0001866E-4	45.0	34
TTGGGTT	20	7.0001866E-4	45.0	5
GCAGTAC	20	7.0001866E-4	45.0	9
ATACGGG	25	3.8633956E-5	45.0	24
GGGACTA	25	3.8633956E-5	45.0	7
CTTGCGG	20	7.0001866E-4	45.0	2
CAGATCA	20	7.0001866E-4	45.0	18