SRR2933648.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933648.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	143633
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14059	9.788140608356018	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCC	1774	1.2350922141847627	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGC	995	0.6927377413268538	No Hit
CCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC	790	0.5500128800484568	No Hit
CTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGCT	697	0.4852645283465499	Illumina Single End Adapter 2 (95% over 21bp)
TCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC	546	0.38013548418538917	No Hit
GCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC	468	0.3258304150160478	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCG	303	0.21095430715782587	No Hit
TCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG	208	0.14481351778491014	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	196	0.13645889175885764	No Hit
CGCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG	187	0.13019292223931828	No Hit
TTCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCT	186	0.1294967034038139	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	177	0.12323073388427451	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	163	0.11348367018721324	No Hit
CGTTTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATG	160	0.11139501368070011	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	157	0.10930635717418698	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	156	0.1086101383386826	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGGTA	35	1.2020246E-7	45.0	5
TTTTGCG	40	6.7429937E-9	45.0	1
GTGTTTG	35	1.2020246E-7	45.0	1
TGTTTAG	20	7.012661E-4	45.0	1
TCTGCGG	20	7.012661E-4	45.0	2
ATAGCAA	20	7.012661E-4	45.0	10
CGGGATG	20	7.012661E-4	45.0	6
GGGATTC	20	7.012661E-4	45.0	7
TGGGTAG	20	7.012661E-4	45.0	6
TGGGTAC	35	1.2020246E-7	45.0	6
TCTTCGG	35	1.2020246E-7	45.0	2
TGCAGGG	45	3.8016879E-10	45.0	3
GACTTTG	20	7.012661E-4	45.0	1
GGTATGC	45	3.8016879E-10	45.0	8
CGTTTTG	20	7.012661E-4	45.0	1
CTCTGTG	20	7.012661E-4	45.0	1
GTATGCT	25	3.8737202E-5	44.999996	9
GCCTCGG	25	3.8737202E-5	44.999996	2
GGGTATG	60	0.0	44.999996	7
TATGCTA	25	3.8737202E-5	44.999996	10