SRR2933647.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933647.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	144014
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13747	9.545599733359257	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCC	1768	1.2276584220978517	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGC	984	0.6832669046064965	No Hit
CCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC	843	0.5853597566903217	No Hit
CTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGCT	689	0.4784257086116628	Illumina Single End Adapter 2 (95% over 21bp)
TCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC	526	0.36524226811282234	No Hit
GCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC	485	0.33677281375421836	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCG	343	0.23817128890246783	No Hit
TCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG	230	0.15970669518241282	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	191	0.1326259946949602	No Hit
TTCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCT	182	0.12637660227477884	No Hit
CGCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG	177	0.1229047175969003	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	168	0.11665532517671892	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	160	0.11110030969211328	No Hit
CGTTTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATG	157	0.10901717888538613	No Hit
GCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG	156	0.10832280194981043	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGATGGG	45	3.8016879E-10	45.0	3
GCGGGCA	20	7.012726E-4	45.0	5
ATGGGGT	20	7.012726E-4	45.0	4
TGCGTTG	20	7.012726E-4	45.0	1
GGGTATG	35	1.202061E-7	45.0	7
CTCTCTG	55	1.8189894E-12	45.0	1
CGAGGGA	20	7.012726E-4	45.0	4
TCTGCGG	45	3.8016879E-10	45.0	2
CAGGGAT	20	7.012726E-4	45.0	5
CGGGATA	20	7.012726E-4	45.0	6
TTCTTCG	20	7.012726E-4	45.0	1
CTTATGG	20	7.012726E-4	45.0	2
TTGATGG	20	7.012726E-4	45.0	2
GCTTGCG	35	1.202061E-7	45.0	1
GGTAGAA	20	7.012726E-4	45.0	8
TTCTACG	20	7.012726E-4	45.0	1
GGGATCA	20	7.012726E-4	45.0	7
GCTCTCG	20	7.012726E-4	45.0	1
GGTATGG	20	7.012726E-4	45.0	8
TCGAGGG	20	7.012726E-4	45.0	3