##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933647.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 144014 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.872685988862195 33.0 31.0 34.0 30.0 34.0 2 32.12718207952005 34.0 31.0 34.0 30.0 34.0 3 32.17173330370658 33.0 31.0 34.0 30.0 34.0 4 35.81423333842543 37.0 35.0 37.0 35.0 37.0 5 35.914209729609624 37.0 35.0 37.0 35.0 37.0 6 35.91052953185107 37.0 35.0 37.0 35.0 37.0 7 35.888601108225586 37.0 35.0 37.0 35.0 37.0 8 35.74344855361284 37.0 35.0 37.0 35.0 37.0 9 37.5293652006055 39.0 37.0 39.0 35.0 39.0 10 37.14915216576166 39.0 37.0 39.0 33.0 39.0 11 37.19548099490327 39.0 37.0 39.0 34.0 39.0 12 37.229699890288444 39.0 37.0 39.0 34.0 39.0 13 37.17340675212132 39.0 37.0 39.0 33.0 39.0 14 38.2781257377755 40.0 38.0 41.0 33.0 41.0 15 38.29938755954282 40.0 38.0 41.0 33.0 41.0 16 38.45069229380477 40.0 38.0 41.0 34.0 41.0 17 38.50413848653603 40.0 38.0 41.0 34.0 41.0 18 38.06375769022456 39.0 38.0 40.0 34.0 41.0 19 37.5470995875401 38.0 37.0 40.0 34.0 41.0 20 36.81285847209299 37.0 35.0 40.0 34.0 41.0 21 36.72037440804366 37.0 35.0 40.0 33.0 41.0 22 36.714805505020344 37.0 35.0 40.0 33.0 41.0 23 36.591248073104005 37.0 35.0 40.0 33.0 41.0 24 36.42244504006555 37.0 35.0 40.0 33.0 41.0 25 36.339626702959436 37.0 35.0 40.0 33.0 41.0 26 36.352583776577276 37.0 35.0 40.0 33.0 41.0 27 36.288763592428516 37.0 35.0 40.0 33.0 41.0 28 36.20540364131265 37.0 35.0 40.0 33.0 41.0 29 36.02060216367853 37.0 35.0 40.0 32.0 41.0 30 35.7060702431708 37.0 35.0 40.0 31.0 41.0 31 35.165886649909034 36.0 35.0 40.0 29.0 41.0 32 34.630452594886606 37.0 35.0 40.0 23.0 41.0 33 33.807643701306816 37.0 34.0 40.0 18.0 41.0 34 33.21213215381838 37.0 33.0 40.0 15.0 41.0 35 32.88521949254933 37.0 33.0 40.0 10.0 41.0 36 32.52290055133529 37.0 32.0 40.0 10.0 41.0 37 32.16105378643743 36.0 31.0 40.0 10.0 41.0 38 31.979356173705334 36.0 31.0 40.0 10.0 41.0 39 32.020928520838254 36.0 31.0 40.0 9.0 41.0 40 31.89558654019748 36.0 30.0 40.0 8.0 41.0 41 31.70234143902676 36.0 30.0 40.0 8.0 41.0 42 31.277091116141488 35.0 29.0 40.0 8.0 41.0 43 31.034753565625564 35.0 27.0 40.0 8.0 41.0 44 30.919966114405543 35.0 26.0 40.0 7.0 41.0 45 30.86860305248101 35.0 26.0 40.0 7.0 41.0 46 30.377539683641867 35.0 24.0 39.0 7.0 41.0 47 30.152561556515337 35.0 23.0 39.0 7.0 40.0 48 30.049745163664642 35.0 23.0 39.0 7.0 40.0 49 30.044912300193037 35.0 24.0 39.0 7.0 40.0 50 29.81423333842543 35.0 23.0 39.0 7.0 40.0 51 28.712402960823255 34.0 22.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 3.0 14 3.0 15 10.0 16 8.0 17 31.0 18 82.0 19 139.0 20 262.0 21 454.0 22 698.0 23 1129.0 24 2069.0 25 3894.0 26 5646.0 27 5929.0 28 5285.0 29 4690.0 30 4603.0 31 4612.0 32 5058.0 33 5934.0 34 7851.0 35 12134.0 36 16041.0 37 15748.0 38 25507.0 39 16188.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.791923007485384 4.15931784409849 34.031413612565444 43.01734553585068 2 48.68207257627731 4.0114155568208645 32.22533920313303 15.081172663768799 3 14.570805616120655 4.131542766675462 64.27222353382311 17.025428083380785 4 12.381435138250447 4.275278792339634 65.04159317844098 18.301692890968933 5 10.214979099254238 5.260599663921563 66.24078214618024 18.283639090643966 6 14.155568208646383 6.258419320343855 68.68360020553558 10.90241226547419 7 50.34718846778785 2.533781437915758 42.11396114266668 5.005068951629703 8 48.28974960767703 2.5254489146888495 41.9077311928007 7.277070284833418 9 43.5027150138181 4.475953726721013 45.01020734095296 7.011123918507922 10 21.697890482869724 16.03385781937867 49.039676698098795 13.228574999652812 11 14.28055605705001 14.299304234310553 52.238671240296085 19.181468468343354 12 13.834766064410406 11.537767161525963 57.32428791645256 17.303178857611066 13 17.008763036926965 12.711958559584485 58.37626897384977 11.903009429638784 14 13.895176857805492 15.121446526032193 56.14662463371617 14.83675198244615 15 9.394919938339328 13.938228227811186 59.11925229491577 17.547599538933714 16 8.413070951435277 14.07015984557057 56.416737261655115 21.100031941339036 17 8.413070951435277 14.157651339453109 54.507895065757495 22.921382643354118 18 9.113002902495591 13.209132445456692 58.91579985279209 18.76206479925563 19 9.737247767578152 15.29990139847515 59.365061730109566 15.597789103837126 20 9.861541239046204 19.2259085922202 56.22717235824295 14.685377810490646 21 9.025511408613053 20.027219575874568 56.74101129056898 14.206257724943407 22 7.460385795825405 19.023150527032094 53.378143791575816 20.13831988556668 23 7.9054814115294345 19.25229491577208 51.11586373547016 21.726359937228327 24 9.576846695460164 18.571805518907883 50.954073909481025 20.89727387615093 25 7.9214520810476765 20.613968086436042 48.47862013415362 22.98595969836266 26 8.279750579804741 20.602163678531255 50.78117405252267 20.336911689141335 27 11.223214409710167 19.857097226658517 52.09701834543864 16.822670018192674 28 7.942283389114947 17.567042093129835 52.3039426722402 22.18673184551502 29 10.242754176677266 15.271431944116545 52.018553751718585 22.467260127487606 30 17.517046953768382 17.225408640826586 48.261280153318424 16.9962642520866 31 16.019970280667156 23.652561556515337 42.6423819906398 17.685086172177705 32 14.054883552987905 22.05063396614218 42.80417181662894 21.090310664240977 33 18.146152457399975 18.427375116308138 41.80079714472204 21.625675281569848 34 17.282347549543793 17.46635743747136 40.814781896204536 24.43651311678031 35 18.104489841265433 16.301887316510893 38.773313705611955 26.82030913661172 36 21.984668157262487 21.23890732845418 37.349146610746175 19.427277903537156 37 20.83408557501354 24.753148999402836 39.15244351243629 15.260321913147331 38 17.27957004180149 23.562292554890497 43.251350563139695 15.906786840168316 39 18.371130584526504 18.20309136611718 47.32803755190468 16.09774049745164 40 24.615662366158848 15.263099420889636 43.20413293152055 16.91710528143097 41 26.887663699362562 18.79886677684114 35.24101823433833 19.07245128945797 42 23.35328509728221 23.37411640534948 36.302026191898015 16.970572305470302 43 18.346827391781353 21.90342605580013 43.0597025289208 16.690044023497716 44 16.28383351618593 17.946171899954173 43.009707389559345 22.760287194300556 45 21.86801283208577 14.115988723318566 41.3730609524074 22.64293749218826 46 24.823975446831557 15.444331801074895 43.78740955740414 15.944283194689405 47 17.578152124099045 21.404169039121197 45.32614884663991 15.691529990139847 48 16.1588456677823 19.648784145985807 46.978765953310095 17.2136042329218 49 20.452872637382477 14.562473092893747 47.4245559459497 17.560098323774078 50 19.930006804893967 11.961337092227145 43.60062216173428 24.50803394114461 51 17.137917146944048 12.05924424014332 40.253725332259364 30.549113280653266 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 230.0 1 448.5 2 667.0 3 10185.0 4 19703.0 5 11918.5 6 4134.0 7 3781.5 8 3429.0 9 3338.0 10 3247.0 11 3106.5 12 2966.0 13 2742.0 14 2518.0 15 2338.0 16 2158.0 17 1963.5 18 1769.0 19 1581.5 20 1394.0 21 1294.5 22 1195.0 23 1053.0 24 911.0 25 856.5 26 739.0 27 676.0 28 665.5 29 655.0 30 663.0 31 671.0 32 801.0 33 931.0 34 1020.0 35 1109.0 36 1264.5 37 1420.0 38 1628.0 39 1836.0 40 2814.5 41 3793.0 42 5016.5 43 6240.0 44 7107.0 45 7974.0 46 10270.0 47 12566.0 48 15821.0 49 19076.0 50 18860.0 51 18644.0 52 14853.0 53 11062.0 54 7985.0 55 4908.0 56 3537.0 57 2166.0 58 1740.0 59 1314.0 60 1206.5 61 1099.0 62 986.0 63 873.0 64 748.5 65 624.0 66 506.0 67 388.0 68 353.5 69 319.0 70 272.5 71 226.0 72 191.0 73 156.0 74 116.0 75 55.0 76 34.0 77 30.5 78 27.0 79 21.5 80 16.0 81 11.0 82 6.0 83 3.5 84 1.0 85 2.5 86 4.0 87 2.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 144014.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.961906481314315 #Duplication Level Percentage of deduplicated Percentage of total 1 78.0207624234173 38.200452733762 2 10.460630814613117 10.243448553612842 3 4.448888132516451 6.534781340702987 4 2.2832992965736327 4.471787465107559 5 1.3316882232811438 3.260099712527949 6 0.7941910596777852 2.3331065035343785 7 0.5445881552076242 1.8664852028275027 8 0.3715679600635353 1.4554140569666838 9 0.2822214658497844 1.243629091616093 >10 1.33452461992285 11.852319913341757 >50 0.08509189925119127 2.8969405752218536 >100 0.03403675970047651 2.7559820572999847 >500 0.005672793283412752 2.1122946380213037 >1k 0.001418198320853188 1.2276584220978517 >5k 0.0 0.0 >10k+ 0.001418198320853188 9.545599733359257 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13747 9.545599733359257 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCC 1768 1.2276584220978517 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGC 984 0.6832669046064965 No Hit CCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC 843 0.5853597566903217 No Hit CTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGCT 689 0.4784257086116628 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC 526 0.36524226811282234 No Hit GCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTGC 485 0.33677281375421836 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCG 343 0.23817128890246783 No Hit TCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG 230 0.15970669518241282 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 191 0.1326259946949602 No Hit TTCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCT 182 0.12637660227477884 No Hit CGCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG 177 0.1229047175969003 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 168 0.11665532517671892 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 160 0.11110030969211328 No Hit CGTTTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATG 157 0.10901717888538613 No Hit GCCTGTCTCTTATACACATCTGACGCCGATTGGATCGTATGCCGTCTTCTG 156 0.10832280194981043 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5235602094240838 0.0 2 0.0 0.0 0.0 1.9810573971974947 0.0 3 0.0 0.0 0.0 2.828891635535434 0.0 4 0.0 0.0 0.0 4.03641312650159 0.0 5 0.0 0.0 0.0 6.633382865554737 0.0 6 0.0 0.0 0.0 8.326273834488314 0.0 7 0.0 0.0 0.0 9.971252794867166 0.0 8 0.0 0.0 0.0 12.636965850542309 0.0 9 0.0 0.0 0.0 13.892399350063188 0.0 10 0.0 0.0 0.0 16.93029844320691 0.0 11 0.0 0.0 0.0 24.196953074006693 0.0 12 0.0 0.0 0.0 30.25122557529129 0.0 13 0.0 0.0 0.0 32.26561306539642 0.0 14 0.0 0.0 0.0 33.0808115877623 0.0 15 0.0 0.0 0.0 34.15431833016235 0.0 16 0.0 0.0 0.0 36.79572819309234 0.0 17 0.0 0.0 0.0 39.74821892316025 0.0 18 0.0 0.0 0.0 42.345188662213396 0.0 19 0.0 0.0 0.0 43.924896190648134 0.0 20 0.0 0.0 0.0 45.250461760662155 0.0 21 0.0 0.0 0.0 46.8586387434555 0.0 22 0.0 0.0 0.0 48.10573971974947 0.0 23 0.0 0.0 0.0 49.00634660519116 0.0 24 0.0 0.0 0.0 49.53546183009985 0.0 25 0.0 0.0 0.0 49.899315344341524 0.0 26 0.0 0.0 0.0 50.10901717888539 0.0 27 0.0 0.0 0.0 50.30483147471774 0.0 28 0.0 0.0 0.0 50.488841362645296 0.0 29 0.0 0.0 0.0 50.65826933492577 0.0 30 0.0 0.0 0.0 50.85408363075812 0.0 31 0.0 0.0 0.0 51.00198591803575 0.0 32 0.0 0.0 0.0 51.16377574402489 0.0 33 0.0 0.0 0.0 51.29987362339772 0.0 34 0.0 0.0 0.0 51.44708153373978 0.0 35 0.0 0.0 0.0 51.584568166983765 0.0 36 0.0 0.0 0.0 51.699140361353756 0.0 37 0.0 0.0 0.0 51.83662699459775 0.0 38 0.0 0.0 0.0 51.9838349049398 0.0 39 0.0 0.0 0.0 52.12201591511936 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATGGG 45 3.8016879E-10 45.0 3 GCGGGCA 20 7.012726E-4 45.0 5 ATGGGGT 20 7.012726E-4 45.0 4 TGCGTTG 20 7.012726E-4 45.0 1 GGGTATG 35 1.202061E-7 45.0 7 CTCTCTG 55 1.8189894E-12 45.0 1 CGAGGGA 20 7.012726E-4 45.0 4 TCTGCGG 45 3.8016879E-10 45.0 2 CAGGGAT 20 7.012726E-4 45.0 5 CGGGATA 20 7.012726E-4 45.0 6 TTCTTCG 20 7.012726E-4 45.0 1 CTTATGG 20 7.012726E-4 45.0 2 TTGATGG 20 7.012726E-4 45.0 2 GCTTGCG 35 1.202061E-7 45.0 1 GGTAGAA 20 7.012726E-4 45.0 8 TTCTACG 20 7.012726E-4 45.0 1 GGGATCA 20 7.012726E-4 45.0 7 GCTCTCG 20 7.012726E-4 45.0 1 GGTATGG 20 7.012726E-4 45.0 8 TCGAGGG 20 7.012726E-4 45.0 3 >>END_MODULE