SRR2933643.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933643.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	96147
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5498	5.718327144892717	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCC	516	0.536678211488658	No Hit
CCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	432	0.4493119910137602	No Hit
CTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT	409	0.4253902877884906	No Hit
GCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	382	0.39730828835013055	No Hit
TCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	348	0.3619457705388624	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGC	264	0.27457955006396456	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	156	0.16225155231052452	No Hit
TCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG	144	0.14977066367125338	No Hit
GGCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCT	120	0.12480888639271115	No Hit
TGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG	110	0.11440814585998522	No Hit
TTCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCT	106	0.11024784964689487	No Hit
GCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG	105	0.10920777559362226	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGTTTG	25	3.8640916E-5	45.000004	1
ATCCTAG	30	2.1447286E-6	45.000004	14
CGATAAC	25	3.8640916E-5	45.000004	16
GGACTAA	50	2.1827873E-11	45.000004	8
ATTGGGC	25	3.8640916E-5	45.000004	4
ATTGGGA	30	2.1447286E-6	45.000004	4
ATAACGA	25	3.8640916E-5	45.000004	18
GCATGGG	30	2.1447286E-6	45.000004	3
TGGGCAC	30	2.1447286E-6	45.000004	6
TGGGTAC	30	2.1447286E-6	45.000004	6
GTTGGGT	35	1.1964585E-7	45.000004	4
CCGGGAC	25	3.8640916E-5	45.000004	5
TAGGGAC	55	1.8189894E-12	45.000004	5
TGCGGGT	30	2.1447286E-6	45.000004	4
TCTTAGG	25	3.8640916E-5	45.000004	2
GCCCTAC	20	7.0010294E-4	45.0	26
GCGGGCT	20	7.0010294E-4	45.0	5
ACTAATC	45	3.765308E-10	45.0	10
TGTTGCG	20	7.0010294E-4	45.0	1
CAGCACA	20	7.0010294E-4	45.0	45