##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933643.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 96147 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.86496718566362 33.0 31.0 34.0 30.0 34.0 2 32.06494222388634 33.0 31.0 34.0 30.0 34.0 3 32.173848378004514 33.0 31.0 34.0 30.0 34.0 4 35.762987924740244 37.0 35.0 37.0 35.0 37.0 5 35.85055175928526 37.0 35.0 37.0 35.0 37.0 6 35.836708373636206 37.0 35.0 37.0 35.0 37.0 7 35.806473420907565 37.0 35.0 37.0 35.0 37.0 8 35.65381135136822 37.0 35.0 37.0 33.0 37.0 9 37.48928203688103 39.0 37.0 39.0 35.0 39.0 10 37.07768313103893 39.0 37.0 39.0 33.0 39.0 11 37.118599644294676 39.0 37.0 39.0 34.0 39.0 12 37.18313623930024 39.0 37.0 39.0 34.0 39.0 13 37.166900683328656 39.0 37.0 39.0 33.0 39.0 14 38.2733210604595 40.0 38.0 41.0 34.0 41.0 15 38.24506224843209 40.0 37.0 41.0 33.0 41.0 16 38.39855637721406 40.0 38.0 41.0 34.0 41.0 17 38.44336276742904 40.0 38.0 41.0 34.0 41.0 18 38.190343952489414 39.0 38.0 40.0 34.0 41.0 19 37.89469250210615 39.0 37.0 40.0 34.0 41.0 20 37.351430621860274 39.0 35.0 40.0 34.0 41.0 21 37.247600029122076 38.0 35.0 40.0 33.0 41.0 22 37.24789124985699 39.0 35.0 40.0 33.0 41.0 23 37.13913070610627 38.0 35.0 40.0 33.0 41.0 24 37.01672439077662 38.0 35.0 40.0 33.0 41.0 25 36.949993239518655 38.0 35.0 40.0 33.0 41.0 26 36.95822022528004 38.0 35.0 40.0 33.0 41.0 27 36.90483322412556 38.0 35.0 40.0 33.0 41.0 28 36.87468147732118 38.0 35.0 40.0 33.0 41.0 29 36.70914329100232 38.0 35.0 40.0 33.0 41.0 30 36.47784122229503 38.0 35.0 40.0 32.0 41.0 31 36.11663390433399 38.0 35.0 40.0 31.0 41.0 32 35.782728530271356 38.0 35.0 40.0 30.0 41.0 33 35.256419857093825 38.0 35.0 40.0 25.0 41.0 34 34.89293477695612 38.0 35.0 40.0 21.0 41.0 35 34.67133659916586 38.0 35.0 40.0 20.0 41.0 36 34.4669620476978 38.0 35.0 40.0 18.0 41.0 37 34.31010847972376 38.0 34.0 40.0 18.0 41.0 38 34.19797809604044 38.0 34.0 40.0 16.0 41.0 39 34.10660759046044 38.0 34.0 40.0 16.0 41.0 40 33.817279790321074 38.0 33.0 40.0 15.0 41.0 41 33.65612031576648 38.0 33.0 40.0 15.0 41.0 42 33.564895420553945 38.0 33.0 40.0 12.0 41.0 43 33.49834108188503 38.0 33.0 40.0 12.0 41.0 44 33.39123425587902 38.0 33.0 40.0 10.0 41.0 45 33.31296868337026 38.0 33.0 40.0 10.0 41.0 46 33.0137601797248 37.0 33.0 40.0 10.0 41.0 47 32.93558821388083 37.0 32.0 40.0 10.0 41.0 48 32.888826484445694 37.0 32.0 40.0 10.0 41.0 49 32.9721260153723 37.0 32.0 40.0 10.0 41.0 50 32.8020011024785 37.0 32.0 40.0 10.0 41.0 51 31.866516896002995 35.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 5.0 13 1.0 14 2.0 15 5.0 16 13.0 17 20.0 18 26.0 19 59.0 20 101.0 21 187.0 22 279.0 23 470.0 24 902.0 25 1590.0 26 2409.0 27 2742.0 28 2786.0 29 2364.0 30 2400.0 31 2559.0 32 2902.0 33 3587.0 34 5086.0 35 7446.0 36 9863.0 37 11304.0 38 19554.0 39 17481.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.03660020593466 5.207650784735874 38.31320790040251 33.44254110892695 2 40.140618012002456 5.013156936773899 36.9018274101116 17.944397641112047 3 19.660519829011825 5.013156936773899 56.18480035778547 19.1415228764288 4 15.527265541306539 5.233652636067688 56.83484664108085 22.404235181544927 5 12.19798849678097 6.9216928245291065 58.595692013271346 22.28462666541858 6 16.327082488273163 8.272749019730204 62.25051223647123 13.149656255525393 7 60.67063974955017 3.2699928234890328 30.66138309047604 5.3979843364847575 8 58.47400334903845 3.7629879247402416 30.57401687000114 7.188991856220163 9 52.980332199652615 5.794252550781616 33.21164466910044 8.01377058046533 10 25.81879829843885 19.012553693823 38.61690952395811 16.551738483780046 11 16.4622921151986 16.45709174493224 43.25771994966042 23.82289619020874 12 15.61879205799453 13.078931219902856 50.31566247516823 20.986614246934383 13 19.26529168876824 14.693126150581923 51.68231978116842 14.359262379481418 14 16.498694707063144 16.635984482095125 49.30575056944054 17.559570241401186 15 12.061738795802261 16.04002204956993 51.21012616098266 20.68811299364515 16 11.273362663421635 15.564708207224353 48.61410132401427 24.54782780533974 17 10.960300373386584 15.904812422644493 46.6587621038618 26.47612510010713 18 12.101261609826619 15.160119400501316 50.647446098162185 22.091172891509874 19 13.343110029434097 17.654216980248993 50.494555212331115 18.50811777798579 20 12.996765369694321 21.016776394479287 48.34784236637649 17.638615869449907 21 12.471527972791662 22.27838622109894 47.64475230636421 17.605333499745182 22 10.290492683079036 20.246081521004296 45.648850198134106 23.81457559778256 23 10.901016152350048 21.12494409601964 42.996661362289 24.97737838934132 24 12.580735748385285 20.53106181160099 43.13603128542752 23.752171154586208 25 11.981653093700272 22.34599103456166 41.115167399918874 24.557188471819195 26 11.009183853890397 22.992917095697212 43.649827867744186 22.348071182668207 27 12.997805443747595 20.60490706938334 45.03312635859673 21.364161128272332 28 10.491226975360647 18.569482147128877 45.66341123487992 25.275879642630557 29 12.696183968298543 16.051462864155926 45.59788656952375 25.65446659802178 30 18.20961652469656 18.637086960591596 41.308621173827575 21.84467534088427 31 16.105546714926103 24.56862928640519 35.387479588546704 23.938344410122 32 13.941152610065839 23.14060761126192 36.92158881712378 25.99665096154846 33 17.83831008767824 18.23665845008165 35.60901536189377 28.316016100346346 34 16.728551072836385 17.558530167347914 37.20240881150738 28.51050994830832 35 15.039470810321696 16.783674997659833 39.882679646790855 28.29417454522762 36 16.889762551093636 17.807107866080067 37.72556606030349 27.5775635225228 37 14.355102083268328 19.631397755520194 36.08432920423934 29.929170956972133 38 16.742072035528928 18.517478444465247 36.454595567204386 28.28585395280144 39 22.756820285604334 17.281870469177406 37.99182501794128 21.96948422727698 40 22.027728374260246 21.041738171757828 35.398920403132706 21.53161305084922 41 15.513744578613997 21.875877562482447 34.06034509657088 28.550032762332677 42 15.2859683609473 17.451402539860837 39.56857728270253 27.694051816489335 43 16.394687301735882 14.855377702892447 43.585343276441286 25.16459171893039 44 18.497717037453064 15.299489323639841 39.017338034468054 27.185455604439035 45 22.583127918707813 15.183001029673312 35.55389143707032 26.679979614548554 46 22.769301174243605 17.276670098911044 37.7557282078484 22.198300518996952 47 15.396216210594194 20.70579425255078 41.786015164279696 22.111974372575325 48 14.809614444548453 18.817019771807754 43.21611698752951 23.15724879611428 49 20.52482136728135 14.357182231374873 43.10170884166953 22.01628755967425 50 19.876855232092524 12.826193224957617 39.46665002548181 27.830301517468044 51 18.049445120492578 13.087251812329036 35.70782239695466 33.15548067022372 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 168.0 1 392.0 2 616.0 3 4436.0 4 8256.0 5 5086.0 6 1916.0 7 1722.5 8 1529.0 9 1483.0 10 1437.0 11 1361.5 12 1286.0 13 1220.5 14 1155.0 15 1051.5 16 948.0 17 866.0 18 784.0 19 736.0 20 688.0 21 625.0 22 562.0 23 532.5 24 503.0 25 452.5 26 414.0 27 426.0 28 433.0 29 440.0 30 481.0 31 522.0 32 552.0 33 582.0 34 676.5 35 771.0 36 807.5 37 844.0 38 1083.0 39 1322.0 40 1692.5 41 2063.0 42 2753.5 43 3444.0 44 4228.5 45 5013.0 46 6961.0 47 8909.0 48 11207.5 49 13506.0 50 13589.5 51 13673.0 52 11337.0 53 9001.0 54 6804.0 55 4607.0 56 3553.5 57 2500.0 58 2204.0 59 1908.0 60 1728.0 61 1548.0 62 1406.0 63 1264.0 64 1204.5 65 1145.0 66 976.0 67 807.0 68 689.5 69 572.0 70 524.0 71 476.0 72 358.5 73 241.0 74 198.0 75 114.5 76 74.0 77 58.5 78 43.0 79 31.5 80 20.0 81 14.5 82 9.0 83 6.0 84 3.0 85 4.5 86 6.0 87 4.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 96147.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.37935661019065 #Duplication Level Percentage of deduplicated Percentage of total 1 79.20719757705326 46.24065233444622 2 11.391412791733476 13.300466993249918 3 4.238375200427579 7.423008518206496 4 1.9419205415998575 4.534722872268506 5 0.9157313379654374 2.672990316910564 6 0.5451630144307857 1.9095759618084809 7 0.343844646356672 1.4051400459712733 8 0.2494209869944771 1.1648829396653042 9 0.18706574024585784 0.9828699803426004 >10 0.9014787101371815 9.244178185486806 >50 0.05522893283449136 2.187275734032263 >100 0.019597363263851773 2.6792307612301993 >500 0.0017815784785319793 0.536678211488658 >1k 0.0 0.0 >5k 0.0017815784785319793 5.718327144892717 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5498 5.718327144892717 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCC 516 0.536678211488658 No Hit CCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 432 0.4493119910137602 No Hit CTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT 409 0.4253902877884906 No Hit GCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 382 0.39730828835013055 No Hit TCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 348 0.3619457705388624 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGC 264 0.27457955006396456 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 156 0.16225155231052452 No Hit TCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG 144 0.14977066367125338 No Hit GGCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCT 120 0.12480888639271115 No Hit TGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG 110 0.11440814585998522 No Hit TTCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCT 106 0.11024784964689487 No Hit GCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG 105 0.10920777559362226 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4638730277595765 0.0 2 0.0 0.0 0.0 1.7868472235223147 0.0 3 0.0 0.0 0.0 2.597064911021665 0.0 4 0.0 0.0 0.0 3.779629109592603 0.0 5 0.0 0.0 0.0 6.294528170405733 0.0 6 0.0 0.0 0.0 8.295630648902202 0.0 7 0.0 0.0 0.0 10.00759254058889 0.0 8 0.0 0.0 0.0 12.673302339126545 0.0 9 0.0 0.0 0.0 13.884988611189117 0.0 10 0.0 0.0 0.0 16.896002995413273 0.0 11 0.0 0.0 0.0 23.602400490914953 0.0 12 0.0 0.0 0.0 29.568265260486548 0.0 13 0.0 0.0 0.0 31.665054551884094 0.0 14 0.0 0.0 0.0 32.32030120544583 0.0 15 0.0 0.0 0.0 33.40925873922223 0.0 16 0.0 0.0 0.0 35.928318096248454 0.0 17 0.0 0.0 0.0 39.15254766139349 0.0 18 0.0 0.0 0.0 41.825537978304055 0.0 19 0.0 0.0 0.0 43.35652698472131 0.0 20 0.0 0.0 0.0 44.67534088427096 0.0 21 0.0 0.0 0.0 46.17096737287695 0.0 22 0.0 0.0 0.0 47.44297794002933 0.0 23 0.0 0.0 0.0 48.4497696235972 0.0 24 0.0 0.0 0.0 49.002048945884944 0.0 25 0.0 0.0 0.0 49.37023516074345 0.0 26 0.0 0.0 0.0 49.602171674623236 0.0 27 0.0 0.0 0.0 49.79354530042539 0.0 28 0.0 0.0 0.0 49.96931781542846 0.0 29 0.0 0.0 0.0 50.15133077475116 0.0 30 0.0 0.0 0.0 50.358305511352405 0.0 31 0.0 0.0 0.0 50.49559528638439 0.0 32 0.0 0.0 0.0 50.64432587600237 0.0 33 0.0 0.0 0.0 50.77433513266145 0.0 34 0.0 0.0 0.0 50.906424537427064 0.0 35 0.0 0.0 0.0 51.04475438651232 0.0 36 0.0 0.0 0.0 51.16228275453212 0.0 37 0.0 0.0 0.0 51.28501149281829 0.0 38 0.0 0.0 0.0 51.40566008299791 0.0 39 0.0 0.0 0.0 51.56479141314862 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGTTTG 25 3.8640916E-5 45.000004 1 ATCCTAG 30 2.1447286E-6 45.000004 14 CGATAAC 25 3.8640916E-5 45.000004 16 GGACTAA 50 2.1827873E-11 45.000004 8 ATTGGGC 25 3.8640916E-5 45.000004 4 ATTGGGA 30 2.1447286E-6 45.000004 4 ATAACGA 25 3.8640916E-5 45.000004 18 GCATGGG 30 2.1447286E-6 45.000004 3 TGGGCAC 30 2.1447286E-6 45.000004 6 TGGGTAC 30 2.1447286E-6 45.000004 6 GTTGGGT 35 1.1964585E-7 45.000004 4 CCGGGAC 25 3.8640916E-5 45.000004 5 TAGGGAC 55 1.8189894E-12 45.000004 5 TGCGGGT 30 2.1447286E-6 45.000004 4 TCTTAGG 25 3.8640916E-5 45.000004 2 GCCCTAC 20 7.0010294E-4 45.0 26 GCGGGCT 20 7.0010294E-4 45.0 5 ACTAATC 45 3.765308E-10 45.0 10 TGTTGCG 20 7.0010294E-4 45.0 1 CAGCACA 20 7.0010294E-4 45.0 45 >>END_MODULE