##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933640.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 830387 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.50299799972784 34.0 31.0 34.0 31.0 34.0 2 32.68443027166851 34.0 31.0 34.0 31.0 34.0 3 32.73137223969065 34.0 31.0 34.0 31.0 34.0 4 36.22195675028631 37.0 37.0 37.0 35.0 37.0 5 36.243723709547474 37.0 35.0 37.0 35.0 37.0 6 36.218101921152424 37.0 37.0 37.0 35.0 37.0 7 36.314454585632966 37.0 37.0 37.0 35.0 37.0 8 36.22824538438102 37.0 37.0 37.0 35.0 37.0 9 38.072050742605555 39.0 39.0 39.0 37.0 39.0 10 37.43192872720792 39.0 37.0 39.0 34.0 39.0 11 37.39533735475146 39.0 37.0 39.0 34.0 39.0 12 37.45807316347679 39.0 37.0 39.0 35.0 39.0 13 37.4958699979648 39.0 37.0 39.0 35.0 39.0 14 38.862706183984095 40.0 38.0 41.0 35.0 41.0 15 38.909911884458694 40.0 38.0 41.0 35.0 41.0 16 38.90880878433791 40.0 38.0 41.0 35.0 41.0 17 38.805436501293975 40.0 38.0 41.0 35.0 41.0 18 38.34688765599654 39.0 38.0 40.0 35.0 41.0 19 37.82729739266149 38.0 37.0 40.0 34.0 41.0 20 37.27381690705659 38.0 35.0 40.0 34.0 41.0 21 37.16568178451734 38.0 35.0 40.0 34.0 41.0 22 37.178707036598595 38.0 35.0 40.0 34.0 41.0 23 37.06358601471362 38.0 35.0 40.0 33.0 41.0 24 36.95931053833935 38.0 35.0 40.0 33.0 41.0 25 36.88347360929301 38.0 35.0 40.0 33.0 41.0 26 36.831350924328056 38.0 35.0 40.0 33.0 41.0 27 36.7496119279324 38.0 35.0 40.0 33.0 41.0 28 36.55168734577974 38.0 35.0 40.0 33.0 41.0 29 36.34102412489598 38.0 35.0 40.0 32.0 41.0 30 36.01866960826699 38.0 35.0 40.0 31.0 41.0 31 35.47429451568967 38.0 35.0 40.0 29.0 41.0 32 34.5896889040893 38.0 35.0 40.0 21.0 41.0 33 33.58943239718348 38.0 33.0 40.0 15.0 41.0 34 32.697097859190954 38.0 32.0 40.0 10.0 41.0 35 32.13360878722813 38.0 31.0 40.0 8.0 41.0 36 31.831042634337965 38.0 30.0 40.0 7.0 41.0 37 31.663190777312266 38.0 29.0 40.0 7.0 41.0 38 31.514171103353014 37.0 27.0 40.0 7.0 41.0 39 31.436426629993004 37.0 27.0 40.0 7.0 41.0 40 31.293955709807594 37.0 25.0 40.0 7.0 41.0 41 31.174518628061374 37.0 24.0 40.0 7.0 41.0 42 31.044658695283044 37.0 24.0 40.0 7.0 41.0 43 30.887173089174084 37.0 23.0 40.0 7.0 41.0 44 30.65660589580521 37.0 23.0 40.0 7.0 41.0 45 30.62018914072595 36.0 23.0 40.0 7.0 41.0 46 30.47472925274601 36.0 23.0 40.0 7.0 41.0 47 30.375094985831907 36.0 23.0 40.0 7.0 41.0 48 30.321098475770935 36.0 23.0 40.0 7.0 41.0 49 30.281713225279297 35.0 23.0 40.0 7.0 41.0 50 30.197538015407275 35.0 22.0 40.0 7.0 41.0 51 29.41838323576838 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 2.0 12 2.0 13 8.0 14 27.0 15 31.0 16 59.0 17 146.0 18 320.0 19 666.0 20 1277.0 21 2054.0 22 3639.0 23 6676.0 24 13695.0 25 27940.0 26 43780.0 27 44100.0 28 34481.0 29 25599.0 30 20848.0 31 19353.0 32 20090.0 33 23539.0 34 35071.0 35 45544.0 36 58314.0 37 78849.0 38 146949.0 39 177250.0 40 71.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.20217802060967 3.7751072692611998 34.43322210005696 39.58949261007217 2 44.07655707519506 3.648660203013775 37.514676891618 14.76010583017316 3 17.303739099961827 4.19563408386692 63.88515234462967 14.615474471541582 4 13.191560079818204 4.0154771209086855 64.9173216825408 17.875641116732318 5 13.250809562288426 4.7188840865765 64.86385263738474 17.166453713750336 6 15.347301920670722 5.665189845216748 66.5494522433516 12.438055990760935 7 63.08624773750071 1.5106209514358968 33.02701029760822 2.376121013455172 8 64.5235293905131 1.6049143351232618 31.64416109597091 2.2273951783927255 9 60.34921066924217 3.65793298787192 32.9952178923803 2.9976384505056073 10 24.037226016303244 22.790457943103636 40.47630803468744 12.696008005905679 11 19.916858043297882 20.988165758857015 44.56355891891371 14.531417278931391 12 14.849100479655872 20.93228819815339 48.612393980156234 15.606217342034498 13 16.141028219372412 20.73888439968352 50.16516395367461 12.954923427269454 14 16.31143069436299 20.679032788326406 49.78642488381923 13.223111633491373 15 15.5065047983651 19.28221419651319 49.60337770220391 15.607903302917798 16 16.176794675253827 19.781138192192316 49.08060940260385 14.961457729950013 17 15.491812853524923 19.8820549936355 49.186222809364786 15.439909343474788 18 18.069406192534323 16.855393930781673 49.20537050796797 15.869829368716031 19 16.763629488419255 19.800647168127632 48.09480398898345 15.340919354469662 20 19.299916785787833 20.26705620391456 46.87537256724876 13.557654443048845 21 17.830120172883245 22.2557674915431 46.70798073669265 13.206131598881004 22 18.101559875094384 18.498724088888675 46.969425099381375 16.43029093663557 23 15.565633855057943 22.57031962205574 46.33454040104192 15.529506121844394 24 14.96651561259991 21.035493089366767 48.625159112558364 15.372832185474966 25 15.709783510580005 23.182925551580166 46.12608338039974 14.981207557440085 26 16.355024825774006 22.307550575815853 46.5547991478672 14.782625450542938 27 16.480990188911917 21.40194872992954 46.44244189757306 15.674619183585484 28 14.419662157524144 23.164741259196013 46.750250184552506 15.665346398727339 29 16.31937879566997 20.933853733259312 46.43967210469335 16.307095366377364 30 17.52002379613361 20.59124239661748 46.88067130145342 15.008062505795492 31 17.945006364502333 22.576220485147285 43.43878215819853 16.03999099215185 32 16.659099913654718 22.47807347658381 43.458652411465984 17.404174198295493 33 17.561450263551816 22.747104663247377 39.94414652445185 19.747298548748958 34 17.837466145303335 25.375638106087884 38.47579502087581 18.311100727732974 35 18.03135164688272 26.323629825611434 36.72095059291631 18.924067934589534 36 18.70621770331183 28.497435533070725 34.63276761317314 18.163579150444313 37 20.4516689206358 25.912616647418613 34.324959326193685 19.310755105751895 38 21.091731927402524 27.29028754062865 33.93369597549095 17.684284556477884 39 21.759613288743683 26.201638513127012 32.366836186019285 19.671912012110017 40 21.710599997350634 26.849167918091204 32.865519330143655 18.574712754414506 41 19.177805047526032 27.18660094630576 33.38262761820693 20.252966387961276 42 22.20338227838345 26.63902493656572 33.604933603247645 17.552659181803186 43 21.934953220606776 25.326022685807942 33.80953699901371 18.929487094571567 44 21.51900258554144 26.658052209391524 32.54374165298831 19.27920355207873 45 21.972044360039355 25.298445182788264 31.997490326799433 20.73202013037295 46 20.97419636868111 26.076997833540265 32.4720883154481 20.47671748233053 47 19.388791009493165 27.523190994078668 34.38240242200323 18.705615574424936 48 20.213707584535882 26.571104798124246 34.50848821091853 18.706699406421343 49 21.56885885737614 25.4405476000949 33.645517090224196 19.34507645230477 50 19.831957870246043 25.385031316723406 33.583618240651646 21.1993925723789 51 19.394812298362087 23.915595981150958 32.72654798304887 23.963043737438085 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 373.0 1 1127.0 2 1881.0 3 25540.0 4 49199.0 5 34107.5 6 19016.0 7 18826.0 8 18636.0 9 18940.0 10 19244.0 11 19069.0 12 18894.0 13 18234.0 14 17574.0 15 17014.0 16 16454.0 17 15769.5 18 15085.0 19 14360.0 20 13635.0 21 13097.5 22 12560.0 23 12085.0 24 11610.0 25 11478.0 26 11385.5 27 11425.0 28 12040.5 29 12656.0 30 13871.5 31 15087.0 32 16203.0 33 17319.0 34 18742.5 35 20166.0 36 22332.0 37 24498.0 38 26696.5 39 28895.0 40 31299.0 41 33703.0 42 36678.0 43 39653.0 44 42219.5 45 44786.0 46 48625.0 47 52464.0 48 56385.5 49 60307.0 50 60274.0 51 60241.0 52 56072.5 53 51904.0 54 45704.5 55 39505.0 56 34043.0 57 28581.0 58 24402.5 59 20224.0 60 17229.5 61 14235.0 62 12018.0 63 9801.0 64 7793.5 65 5786.0 66 4621.0 67 3456.0 68 2793.5 69 2131.0 70 1706.0 71 1281.0 72 1402.0 73 1523.0 74 1882.5 75 1915.0 76 1588.0 77 1183.5 78 779.0 79 559.5 80 340.0 81 288.5 82 237.0 83 145.5 84 54.0 85 31.5 86 9.0 87 5.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 830387.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.42372711433972 #Duplication Level Percentage of deduplicated Percentage of total 1 77.75888293677158 34.54339396299028 2 7.762395471337031 6.896690763445255 3 3.5420014604111456 4.720467189476924 4 2.1785939215854357 3.8712504746188245 5 1.5886415103599796 3.5286688469372116 6 1.2013801782204963 3.202187111870649 7 0.9557962055705612 2.972202086923157 8 0.7576710806359781 2.692685866287966 9 0.6435227317474596 2.572891040432123 >10 3.479085016223843 24.938708621951903 >50 0.08946570950477181 2.7654570614350336 >100 0.04012381585685147 3.2705538625008477 >500 0.0018977480471280587 0.5532819429824578 >1k 2.7110686387543697E-4 0.18631414144402747 >5k 0.0 0.0 >10k+ 2.7110686387543697E-4 3.2852470267034137 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27278 3.2849743553307076 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCC 1547 0.1862986776045386 No Hit GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 913 0.10994873474656998 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07960143884718812 0.0 2 0.0 0.0 0.0 0.25686818314833926 0.0 3 0.0 0.0 0.0 0.3948761240240996 0.0 4 0.0 0.0 0.0 0.612967206856562 0.0 5 0.0 0.0 0.0 1.1218865420581006 0.0 6 0.0 0.0 0.0 1.8104811371083602 0.0 7 0.0 0.0 0.0 2.348543510435496 0.0 8 0.0 0.0 0.0 3.1646690037295864 0.0 9 0.0 0.0 0.0 3.6090401222562494 0.0 10 0.0 0.0 0.0 4.492483625104921 0.0 11 0.0 0.0 0.0 6.0140633222822615 0.0 12 0.0 0.0 0.0 7.27492121143515 0.0 13 1.2042577737849942E-4 0.0 0.0 7.760598371602638 0.0 14 1.2042577737849942E-4 0.0 0.0 7.943043424331065 0.0 15 1.2042577737849942E-4 0.0 0.0 8.163061319601583 0.0 16 1.2042577737849942E-4 0.0 0.0 8.696667939165714 0.0 17 1.2042577737849942E-4 0.0 0.0 9.399834053278772 0.0 18 1.2042577737849942E-4 0.0 0.0 10.101916335395424 0.0 19 1.2042577737849942E-4 0.0 0.0 10.52593549754512 0.0 20 1.2042577737849942E-4 0.0 0.0 10.913826926481267 0.0 21 1.2042577737849942E-4 0.0 0.0 11.388424915129933 0.0 22 1.2042577737849942E-4 0.0 0.0 11.806302362633327 0.0 23 1.2042577737849942E-4 0.0 0.0 12.157343503691653 0.0 24 1.2042577737849942E-4 0.0 0.0 12.4007239997736 0.0 25 1.2042577737849942E-4 0.0 0.0 12.580037982290186 0.0 26 1.2042577737849942E-4 0.0 0.0 12.751163011945033 0.0 27 1.2042577737849942E-4 0.0 0.0 12.918554842501146 0.0 28 1.2042577737849942E-4 0.0 0.0 13.092931368145214 0.0 29 1.2042577737849942E-4 0.0 0.0 13.27706238175694 0.0 30 1.2042577737849942E-4 0.0 0.0 13.524176076937621 0.0 31 2.4085155475699884E-4 0.0 0.0 13.709752199877888 0.0 32 2.4085155475699884E-4 0.0 0.0 14.032613709029645 0.0 33 2.4085155475699884E-4 0.0 0.0 14.228185171492328 0.0 34 3.6127733213549827E-4 0.0 0.0 14.401959568249502 0.0 35 3.6127733213549827E-4 0.0 0.0 14.57717907433522 0.0 36 4.817031095139977E-4 0.0 0.0 14.745775162665119 0.0 37 0.0013246835511634936 0.0 0.0 14.914491676772396 0.0 38 0.001445109328541993 0.0 0.0 15.113314635224299 0.0 39 0.001445109328541993 0.0 0.0 15.326588686961621 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCCGG 30 2.1647702E-6 45.000004 27 GCGATAC 30 2.1647702E-6 45.000004 9 AGCTACG 30 2.1647702E-6 45.000004 9 CGGGTAC 70 0.0 45.0 6 CCGTTCG 20 7.0321554E-4 45.0 1 ACGAATG 20 7.0321554E-4 45.0 24 CGTTTTT 22870 0.0 44.458897 1 AGGCACG 235 0.0 41.17021 10 ATCCGGG 55 6.002665E-11 40.909092 3 TTTCGCG 95 0.0 40.263157 1 CGTTAGG 85 0.0 39.705883 2 GTTTTTT 26125 0.0 39.703346 2 CGCGGGA 380 0.0 39.67105 4 CTGCGCG 75 0.0 39.000004 1 GAACATG 1005 0.0 38.955227 9 CACGACC 880 0.0 38.863636 27 ATGTGCG 35 6.246195E-6 38.571426 12 GGGTACG 35 6.246195E-6 38.571426 7 CACGCCG 35 6.246195E-6 38.571426 26 CGCTAGG 35 6.246195E-6 38.571426 2 >>END_MODULE