##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933639.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 841774 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37872992038243 34.0 31.0 34.0 31.0 34.0 2 32.599075286240726 34.0 31.0 34.0 31.0 34.0 3 32.67137378916431 34.0 31.0 34.0 31.0 34.0 4 36.13857995138838 37.0 35.0 37.0 35.0 37.0 5 36.21065511645644 37.0 35.0 37.0 35.0 37.0 6 36.20986630615818 37.0 37.0 37.0 35.0 37.0 7 36.23377771230758 37.0 37.0 37.0 35.0 37.0 8 36.186177049897005 37.0 37.0 37.0 35.0 37.0 9 38.04007488945964 39.0 39.0 39.0 35.0 39.0 10 37.43948613285751 39.0 37.0 39.0 34.0 39.0 11 37.40373425646314 39.0 37.0 39.0 34.0 39.0 12 37.44030345437136 39.0 37.0 39.0 35.0 39.0 13 37.49171511593373 39.0 37.0 39.0 35.0 39.0 14 38.88528156013372 40.0 38.0 41.0 35.0 41.0 15 38.91578380895585 40.0 38.0 41.0 35.0 41.0 16 38.97259715790699 40.0 38.0 41.0 35.0 41.0 17 38.889494092238536 40.0 38.0 41.0 35.0 41.0 18 38.47581179746583 39.0 38.0 41.0 35.0 41.0 19 37.98927621903266 39.0 37.0 41.0 35.0 41.0 20 37.39496111782972 38.0 35.0 41.0 34.0 41.0 21 37.313472499744584 38.0 35.0 41.0 34.0 41.0 22 37.30793182017976 38.0 35.0 41.0 34.0 41.0 23 37.136483189074504 38.0 35.0 40.0 34.0 41.0 24 37.03887741840447 38.0 35.0 40.0 33.0 41.0 25 36.9710207252778 38.0 35.0 40.0 33.0 41.0 26 36.95155706876192 38.0 35.0 40.0 33.0 41.0 27 36.875442814817276 38.0 35.0 40.0 33.0 41.0 28 36.741068267729815 38.0 35.0 40.0 33.0 41.0 29 36.477574740963725 38.0 35.0 40.0 33.0 41.0 30 36.08035767319969 38.0 35.0 40.0 31.0 41.0 31 35.54543856189429 38.0 35.0 40.0 29.0 41.0 32 34.7434014355397 38.0 35.0 40.0 21.0 41.0 33 33.67096037653812 38.0 33.0 40.0 15.0 41.0 34 32.809779109357144 38.0 33.0 41.0 10.0 41.0 35 32.2952716524863 38.0 31.0 41.0 8.0 41.0 36 31.980984207162493 38.0 30.0 40.0 7.0 41.0 37 31.823382523100026 38.0 29.0 40.0 7.0 41.0 38 31.667738609175384 38.0 29.0 40.0 7.0 41.0 39 31.618987994402296 38.0 27.0 40.0 7.0 41.0 40 31.47870924975112 38.0 27.0 40.0 7.0 41.0 41 31.383814420497664 38.0 25.0 40.0 7.0 41.0 42 31.189376245880723 37.0 24.0 40.0 7.0 41.0 43 31.057619978759146 37.0 23.0 40.0 7.0 41.0 44 30.843826252652136 37.0 23.0 40.0 7.0 41.0 45 30.791297901812126 37.0 23.0 40.0 7.0 41.0 46 30.62380045000202 36.0 23.0 40.0 7.0 41.0 47 30.583301456210336 36.0 23.0 40.0 7.0 41.0 48 30.484754815425518 36.0 23.0 40.0 7.0 41.0 49 30.437149401145675 36.0 23.0 40.0 7.0 41.0 50 30.28975235633317 35.0 23.0 40.0 7.0 41.0 51 29.613372472896526 35.0 21.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 5.0 9 7.0 10 3.0 11 7.0 12 14.0 13 6.0 14 15.0 15 32.0 16 65.0 17 148.0 18 329.0 19 675.0 20 1328.0 21 2166.0 22 3621.0 23 6727.0 24 13670.0 25 27701.0 26 43698.0 27 44217.0 28 34754.0 29 25577.0 30 20888.0 31 18953.0 32 19524.0 33 23311.0 34 34688.0 35 45080.0 36 57757.0 37 76263.0 38 145380.0 39 195073.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.41777484217854 4.039682860245149 34.22771432712343 39.314827970452875 2 43.94326743282639 3.6702250247691186 37.54855816406779 14.837949378336704 3 17.553167477256366 4.257080879190852 63.55221235153379 14.637539292018998 4 13.546153718218903 4.127592441676745 64.47680731407718 17.849446526027176 5 13.330775243711496 4.7683820122740785 64.68577076507471 17.215071978939715 6 15.46971039732755 5.69796643754737 66.36935804622142 12.462965118903648 7 63.233837110673406 1.5611078508008087 32.77316714462552 2.4318878939002633 8 64.71000529833422 1.6095769173198506 31.415795688629018 2.2646220957169025 9 60.52265810063033 3.6830550717888646 32.7622378453124 3.0320489822684 10 24.144604133651075 22.847343823876717 40.2599747675742 12.748077274898012 11 20.079261179366434 21.04757333916229 44.396833354320755 14.476332127150519 12 14.931323609424856 21.045434997992334 48.36464419190899 15.658597200673816 13 16.15801866059061 20.751769477318142 50.013305233946404 13.076906628144847 14 16.446932311998232 20.784676171989155 49.527901788365995 13.240489727646612 15 15.64030250399751 19.395467191906615 49.38689006788045 15.57734023621542 16 16.291902577176295 19.909381853086458 48.80205375789701 14.996661811840234 17 15.602168753133263 19.96806743852863 49.02954949903418 15.400214309303923 18 18.28614331162521 16.89443960017772 48.90291218308002 15.916504905117051 19 16.897884705395985 19.840717342184483 47.777669540755596 15.483728411663938 20 19.43716484472079 20.296540401580472 46.71515157274993 13.551143180948804 21 18.0085153497257 22.30931342616902 46.46900474474146 13.213166479363819 22 18.25858246987909 18.567691565669644 46.76504620004894 16.408679764402322 23 15.758861642198498 22.74208991962213 46.03480269050838 15.46424574767099 24 15.154661464953776 21.134888936935567 48.325797660654764 15.384651937455896 25 15.847484004020082 23.321223986485684 45.951169791416696 14.880122218077535 26 16.474730747207683 22.417418451983547 46.38145155350486 14.72639924730391 27 16.628334921249646 21.521928688697916 46.18329860508878 15.66643778496366 28 14.56744922033705 23.258855702361917 46.54147075105669 15.632224326244337 29 16.397037684699217 21.08214318807661 46.24756763691917 16.273251490305 30 17.58880649675566 20.609688586247614 46.71099368714168 15.090511229855045 31 18.05033179927154 22.58135794168031 43.23904040752031 16.129269851527845 32 16.762218837835334 22.631727755905978 43.26600726560811 17.34004614065058 33 17.621594394695013 22.84496788924343 39.7675623148256 19.76587540123596 34 17.990695839976052 25.460990717223385 38.208355211731416 18.339958231069147 35 17.996516879827603 26.299933236236804 36.6745706092134 19.028979274722193 36 18.701456685523667 28.56051624307712 34.540506121595584 18.19752094980363 37 20.436601748212706 25.920852865495963 34.294359293587114 19.348186092704218 38 21.14605582971201 27.357699334975894 33.84114976228774 17.655095073024352 39 21.772708589241294 26.187432731350697 32.33100570937093 19.70885297003709 40 21.696322290781136 26.899025154019963 32.91346608472108 18.491186470477825 41 19.169753401744412 27.218231972001988 33.286369025415375 20.32564560083823 42 22.181369346166548 26.66463920244626 33.564353377509875 17.58963807387731 43 21.910631594703567 25.514092856277337 33.806342319910094 18.768933229109 44 21.55032110756569 26.785217885085544 32.494707605604354 19.169753401744412 45 22.036556130267744 25.33767970975582 31.917593083179096 20.708171076797335 46 21.08131161095496 26.113422367523825 32.3996702202729 20.405595801248317 47 19.43954077935408 27.757212743563 34.25171126691963 18.551535210163298 48 20.167051964066367 26.855901940425813 34.299348756317016 18.677697339190804 49 21.630033714512447 25.623979833066834 33.59013226828104 19.155854184139688 50 19.996816247591394 25.525497342517113 33.47121673988505 21.00646967000644 51 19.445480615937292 24.06904941231257 32.62859152219004 23.856878449560096 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 367.0 1 1183.5 2 2000.0 3 25556.0 4 49112.0 5 34266.0 6 19420.0 7 19130.0 8 18840.0 9 19080.0 10 19320.0 11 19075.0 12 18830.0 13 18397.5 14 17965.0 15 17201.5 16 16438.0 17 15785.5 18 15133.0 19 14420.5 20 13708.0 21 13200.5 22 12693.0 23 12176.5 24 11660.0 25 11534.0 26 11581.5 27 11755.0 28 12298.0 29 12841.0 30 14198.5 31 15556.0 32 16415.5 33 17275.0 34 18901.5 35 20528.0 36 22710.5 37 24893.0 38 27157.0 39 29421.0 40 31788.0 41 34155.0 42 37117.5 43 40080.0 44 42716.5 45 45353.0 46 49308.5 47 53264.0 48 57270.5 49 61277.0 50 60906.0 51 60535.0 52 56497.0 53 52459.0 54 46733.5 55 41008.0 56 35067.0 57 29126.0 58 24984.5 59 20843.0 60 17689.0 61 14535.0 62 12307.5 63 10080.0 64 8007.0 65 5934.0 66 4698.0 67 3462.0 68 2837.5 69 2213.0 70 1755.5 71 1298.0 72 1437.0 73 1576.0 74 1980.5 75 2006.0 76 1627.0 77 1217.5 78 808.0 79 571.5 80 335.0 81 267.0 82 199.0 83 123.0 84 47.0 85 26.5 86 6.0 87 4.5 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 841774.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.436839807146015 #Duplication Level Percentage of deduplicated Percentage of total 1 77.88981615060847 34.61177282892643 2 7.622592524622263 6.774478458635764 3 3.5198832693426296 4.692374669388955 4 2.2260551086530094 3.956754170603712 5 1.5886878237021957 3.529813316270895 6 1.2179895862907841 3.2474164879665377 7 0.933254256645932 2.902960893133869 8 0.7538491699831342 2.679893984423242 9 0.6331541550595207 2.5321832785447933 >10 3.4859671187704966 25.207953849916258 >50 0.08592382035313445 2.659918216584821 >100 0.04067219755517659 3.299898812947314 >500 0.0016161138099930654 0.49265083472557897 >1k 2.693523016655109E-4 0.17463011852881918 >5k 0.0 0.0 >10k+ 2.693523016655109E-4 3.2373000794029965 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27047 3.2130952013248213 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCC 1459 0.17332443149824062 No Hit GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 917 0.10893660293618002 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.375934633286369E-4 0.0 0.0 0.08078177753173654 0.0 2 2.375934633286369E-4 0.0 0.0 0.258145297906564 0.0 3 2.375934633286369E-4 0.0 0.0 0.390960043907272 0.0 4 2.375934633286369E-4 0.0 0.0 0.608833249779632 0.0 5 2.375934633286369E-4 0.0 0.0 1.1155013103279503 0.0 6 2.375934633286369E-4 0.0 0.0 1.7972757533494739 0.0 7 2.375934633286369E-4 0.0 0.0 2.3217633236474398 0.0 8 2.375934633286369E-4 0.0 0.0 3.121978108138289 0.0 9 2.375934633286369E-4 0.0 0.0 3.5431125218882977 0.0 10 2.375934633286369E-4 0.0 0.0 4.392984340214832 0.0 11 2.375934633286369E-4 0.0 0.0 5.833869898571351 0.0 12 3.5639019499295537E-4 0.0 0.0 7.079691223535058 0.0 13 3.5639019499295537E-4 0.0 0.0 7.565332262578792 0.0 14 3.5639019499295537E-4 0.0 0.0 7.7388942875403615 0.0 15 3.5639019499295537E-4 0.0 0.0 7.961162972484301 0.0 16 3.5639019499295537E-4 0.0 0.0 8.472107715372534 0.0 17 3.5639019499295537E-4 0.0 0.0 9.152694191077416 0.0 18 3.5639019499295537E-4 0.0 0.0 9.828885187710716 0.0 19 3.5639019499295537E-4 0.0 0.0 10.259404543262205 0.0 20 3.5639019499295537E-4 0.0 0.0 10.634683418589788 0.0 21 3.5639019499295537E-4 0.0 0.0 11.07019223687118 0.0 22 3.5639019499295537E-4 0.0 0.0 11.472556767018226 0.0 23 4.751869266572738E-4 0.0 0.0 11.818374052893057 0.0 24 7.127803899859107E-4 0.0 0.0 12.05668029661168 0.0 25 7.127803899859107E-4 0.0 0.0 12.242003198008016 0.0 26 7.127803899859107E-4 0.0 0.0 12.402616379218175 0.0 27 8.315771216502292E-4 0.0 0.0 12.556695740186797 0.0 28 8.315771216502292E-4 0.0 0.0 12.734534447488281 0.0 29 8.315771216502292E-4 0.0 0.0 12.916174650203024 0.0 30 8.315771216502292E-4 0.0 0.0 13.167429737673057 0.0 31 8.315771216502292E-4 0.0 0.0 13.3490699403878 0.0 32 8.315771216502292E-4 0.0 0.0 13.667445181248173 0.0 33 8.315771216502292E-4 0.0 0.0 13.855025220546132 0.0 34 8.315771216502292E-4 0.0 0.0 14.025498530484429 0.0 35 8.315771216502292E-4 0.0 0.0 14.195140263301075 0.0 36 8.315771216502292E-4 0.0 0.0 14.362643654947766 0.0 37 0.0014255607799718215 0.0 0.0 14.539769581859264 0.0 38 0.0014255607799718215 0.0 0.0 14.730675929643823 0.0 39 0.0014255607799718215 0.0 0.0 14.945222827029582 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 20 7.0322084E-4 45.000004 1 TTACTCG 20 7.0322084E-4 45.000004 1 CGATTTA 20 7.0322084E-4 45.000004 8 TTATCCG 20 7.0322084E-4 45.000004 1 GACGGGT 20 7.0322084E-4 45.000004 4 ACCGATA 25 3.889913E-5 45.0 11 GCGATAT 45 3.8380676E-10 45.0 9 CGTTTTT 22935 0.0 44.34271 1 GGCGATA 70 0.0 41.785713 8 TGCTGCG 95 0.0 40.263157 1 AGTGCGC 130 0.0 39.807693 13 CTTCTCG 85 0.0 39.705883 1 GTTTTTT 26320 0.0 39.460487 2 GCCGATC 80 0.0 39.375004 9 AGGCACG 240 0.0 39.374996 10 TGGGAAC 1215 0.0 39.074074 6 GGAACAT 890 0.0 38.932587 8 GCGGGTC 105 0.0 38.57143 5 GCGTTTG 200 0.0 38.25 1 GCTTTCG 130 0.0 38.076927 1 >>END_MODULE