##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933638.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 130115 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.899611881796872 33.0 31.0 34.0 30.0 34.0 2 32.10727433424279 33.0 31.0 34.0 30.0 34.0 3 32.18163163355493 33.0 31.0 34.0 30.0 34.0 4 35.841832225339125 37.0 35.0 37.0 35.0 37.0 5 35.89071206240633 37.0 35.0 37.0 35.0 37.0 6 35.85395995849825 37.0 35.0 37.0 35.0 37.0 7 35.910071859508896 37.0 35.0 37.0 35.0 37.0 8 35.702125043230986 37.0 35.0 37.0 35.0 37.0 9 37.53481151289244 39.0 37.0 39.0 35.0 39.0 10 37.039611113245975 39.0 37.0 39.0 33.0 39.0 11 37.08919033162971 39.0 37.0 39.0 33.0 39.0 12 37.17801175882873 39.0 37.0 39.0 34.0 39.0 13 37.126803212542754 39.0 37.0 39.0 33.0 39.0 14 38.13340506475041 40.0 37.0 41.0 33.0 41.0 15 38.161603197171736 40.0 37.0 41.0 33.0 41.0 16 38.274157476078855 40.0 38.0 41.0 33.0 41.0 17 38.303393152211505 40.0 38.0 41.0 33.0 41.0 18 37.91738077854206 39.0 37.0 40.0 33.0 41.0 19 37.50897283172578 38.0 37.0 40.0 34.0 41.0 20 36.89562310263997 38.0 35.0 40.0 33.0 41.0 21 36.730123352419014 38.0 35.0 40.0 33.0 41.0 22 36.766998424470664 38.0 35.0 40.0 33.0 41.0 23 36.705383699035465 38.0 35.0 40.0 33.0 41.0 24 36.57892633439649 38.0 35.0 40.0 33.0 41.0 25 36.484294662414015 37.0 35.0 40.0 32.0 41.0 26 36.44799600353534 37.0 35.0 40.0 32.0 41.0 27 36.38077854205895 37.0 35.0 40.0 32.0 41.0 28 36.283364715828306 38.0 35.0 40.0 32.0 41.0 29 36.15354109825923 38.0 35.0 40.0 31.0 41.0 30 36.01155900549514 38.0 35.0 40.0 31.0 41.0 31 35.60849248741498 37.0 35.0 40.0 30.0 41.0 32 35.04095607731622 37.0 35.0 40.0 25.0 41.0 33 34.53181416439304 38.0 34.0 40.0 22.0 41.0 34 34.145832532759485 38.0 34.0 40.0 18.0 41.0 35 33.81381854513315 38.0 34.0 40.0 15.0 41.0 36 33.64951004880298 38.0 33.0 40.0 15.0 41.0 37 33.377097183260965 38.0 33.0 40.0 12.0 41.0 38 33.06468892902433 37.0 33.0 40.0 10.0 41.0 39 32.939953118395266 37.0 33.0 40.0 10.0 41.0 40 32.92522768320332 37.0 33.0 40.0 10.0 41.0 41 32.85348345694194 37.0 33.0 40.0 10.0 41.0 42 32.743742074318874 37.0 32.0 40.0 10.0 41.0 43 32.5545402144257 37.0 31.0 40.0 10.0 41.0 44 32.393544172462825 37.0 31.0 40.0 10.0 41.0 45 32.336832801752294 37.0 31.0 40.0 10.0 41.0 46 32.00648656957307 36.0 31.0 40.0 10.0 41.0 47 31.763386235253428 36.0 30.0 40.0 9.0 41.0 48 31.714245090881143 36.0 30.0 40.0 8.0 41.0 49 31.855181954424932 36.0 30.0 40.0 8.0 41.0 50 31.756430849633016 36.0 30.0 40.0 8.0 41.0 51 30.599193021557852 35.0 26.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 2.0 12 1.0 13 3.0 14 3.0 15 6.0 16 15.0 17 23.0 18 65.0 19 106.0 20 181.0 21 285.0 22 471.0 23 793.0 24 1505.0 25 2706.0 26 4115.0 27 4337.0 28 4043.0 29 3642.0 30 3618.0 31 3891.0 32 4313.0 33 5288.0 34 7321.0 35 11064.0 36 14505.0 37 16007.0 38 25479.0 39 16320.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.5939745609653 4.382277216308649 37.03954194366522 36.984206279060835 2 43.19332897821158 4.5836375513968415 35.89132690312416 16.331706567267418 3 17.511432194597088 4.722745263805096 59.599584982515466 18.16623755908235 4 13.504976367059909 4.604388425623487 61.4433385850978 20.447296622218804 5 11.469085040156784 5.389847442646889 61.89140375821389 21.24966375898244 6 15.189639933904623 6.923106482726818 66.32209968105138 11.565153902317181 7 56.73673289013564 2.6676401644698924 35.30722822118895 5.288398724205511 8 54.228182761403374 3.098797217845752 35.261883718249244 7.4111363025016335 9 49.15344118664259 5.054759251431426 37.84344618222342 7.948353379702571 10 24.80651731160896 17.14944472197671 42.85286093071514 15.191177035699187 11 15.008261922145794 14.58094762325635 46.99381316527687 23.416977289320986 12 13.541866810129502 12.232256081158974 54.46797064135572 19.757906467355802 13 18.080159858586633 14.192829420128348 54.683164892595016 13.043845828690003 14 15.559312915497827 16.28175075894401 52.74949083503056 15.40944549052761 15 9.988856011989395 14.979825538946317 55.461706951542865 19.569611497521425 16 8.756868923644468 14.83764362294893 52.18383737463014 24.221650078776467 17 8.565499750220958 14.700841563232526 50.47534872996964 26.258309956576873 18 10.029589209545401 13.808553971486761 54.65011720401184 21.511739614956 19 10.735887484148638 16.056565346040042 55.94128271144757 17.266264458363757 20 10.78507474157476 20.2282596164931 52.87783883487685 16.108826807055294 21 9.75060523383161 21.560158321484842 52.71721169734466 15.972024747338892 22 8.03058832571187 20.003074203589133 49.71064058717288 22.25569688352611 23 8.644660492641124 20.729354801521733 46.673327441109784 23.952657264727357 24 10.596779771740383 19.764054874534065 46.30672866310571 23.332436690619836 25 8.862160396572264 22.375590823502286 44.7181339584214 24.044114821504053 26 8.150482265688046 22.435537793490372 47.59943127233601 21.81454866848557 27 11.045613495753756 21.108250393882336 48.93440418091688 18.91173192944703 28 9.589978096299427 17.459939284479116 49.313299773277485 23.636782845943973 29 10.449986550359297 16.852015524728124 48.65311455251124 24.044883372401337 30 16.80205971640472 17.841909080428852 45.8140875379472 19.54194366521923 31 17.176344003381626 24.025669599969255 39.69181109018945 19.10617530645967 32 13.993774737732007 24.206279060830806 38.93632555816009 22.863620643277102 33 16.98420627906083 17.81962110440764 38.697306229105024 26.498866387426506 34 17.684356146485804 15.613111478307651 41.251200860777004 25.451331514429544 35 15.473235215002113 16.344771932521233 42.09814394958306 26.083848902893592 36 17.33312838642739 16.232563501517888 41.762287207470315 24.672020904584407 37 21.06367444183991 19.05775659993083 36.87430350074934 23.00426545747992 38 21.790723590669792 24.007992929331746 34.441839910848095 19.759443569150367 39 17.973331283864276 20.31433731698882 41.907543327056835 19.804788072090073 40 17.934903739000116 15.430196364754256 48.78914806133036 17.845751834915266 41 20.425008646197597 15.165814856088843 41.48714598624294 22.922030511470624 42 22.883602966606464 14.621680820812358 36.8258847942205 25.668831418360682 43 19.083118779541174 15.309533873880799 39.53733235983553 26.070014986742496 44 17.683587595588516 16.04426853168351 40.04073319755601 26.23141067517196 45 20.802367136763632 13.95842139645698 40.178303808169694 25.060907658609693 46 23.320139876263305 14.312723360104524 44.630519156131115 17.736617607501056 47 16.490796603005034 18.397571379164585 45.7641317296238 19.347500288206586 48 16.238711908696153 17.637474541751526 44.68816047342735 21.435653076124968 49 20.887676286362066 12.46128424854936 45.528955155055144 21.122084310033433 50 20.202128885985474 10.735887484148638 41.61165123160281 27.45033239826308 51 17.270875763747455 10.509164969450103 38.11551319986166 34.10444606694079 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 305.0 1 435.5 2 566.0 3 7493.0 4 14420.0 5 8637.5 6 2855.0 7 2611.0 8 2367.0 9 2289.5 10 2212.0 11 2177.5 12 2143.0 13 1991.5 14 1840.0 15 1703.5 16 1567.0 17 1448.5 18 1330.0 19 1184.0 20 1038.0 21 933.0 22 828.0 23 803.5 24 779.0 25 732.0 26 620.5 27 556.0 28 567.0 29 578.0 30 615.0 31 652.0 32 689.5 33 727.0 34 804.5 35 882.0 36 1044.5 37 1207.0 38 1507.0 39 1807.0 40 2385.0 41 2963.0 42 4031.5 43 5100.0 44 6221.5 45 7343.0 46 10009.5 47 12676.0 48 15718.5 49 18761.0 50 18758.0 51 18755.0 52 14971.0 53 11187.0 54 8213.0 55 5239.0 56 3838.5 57 2438.0 58 2000.0 59 1562.0 60 1377.0 61 1192.0 62 1093.5 63 995.0 64 910.0 65 825.0 66 681.0 67 537.0 68 474.0 69 411.0 70 362.5 71 314.0 72 252.0 73 190.0 74 154.0 75 104.0 76 90.0 77 61.5 78 33.0 79 29.0 80 25.0 81 18.0 82 11.0 83 8.0 84 5.0 85 3.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 130115.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.21788417937978 #Duplication Level Percentage of deduplicated Percentage of total 1 76.81241486968366 38.57356953464243 2 11.228784377343475 11.277715866733274 3 4.715263004851471 7.103715943588364 4 2.4150227269249016 4.851093263651386 5 1.3421894369538268 3.370095684586712 6 0.8708161797340108 2.623832763324751 7 0.5631992164184815 1.9797871114014525 8 0.34128648168837333 1.3710948007531798 9 0.2754778775959964 1.2450524535987395 >10 1.3177025145008494 11.911770356991893 >50 0.07652163266555455 2.627675517811167 >100 0.033669518372844 3.0088767628636206 >500 0.006121730613244365 2.2203435422510855 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0015304326533110912 7.835376397801945 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10195 7.835376397801945 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCC 941 0.7232063943434653 No Hit CCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 716 0.5502824424547516 TruSeq Adapter, Index 27 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGCT 698 0.5364485263036545 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 534 0.4104061791492142 TruSeq Adapter, Index 27 (95% over 22bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGC 498 0.38273834684701996 No Hit GCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 456 0.3504592091611267 TruSeq Adapter, Index 27 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 243 0.18675786803981093 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 195 0.14986742497021865 No Hit GGCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCT 193 0.1483303231756523 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCG 173 0.13295930522998886 No Hit CGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 172 0.13219075433270566 No Hit TTCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCT 171 0.13142220343542252 No Hit GTGTGTGTGTGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGC 166 0.12757944894900666 No Hit GCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 159 0.12219959266802445 TruSeq Adapter, Index 27 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 155 0.11912538907889174 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 153 0.11758828728432541 No Hit GTGCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTC 151 0.11605118548975905 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 139 0.10682857472236099 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0015371017945663451 0.0 0.0 0.5871728855243439 0.0 2 0.0015371017945663451 0.0 0.0 2.0635591592053184 0.0 3 0.0015371017945663451 0.0 0.0 2.9912000922261077 0.0 4 0.0015371017945663451 0.0 0.0 4.36767474926027 0.0 5 0.0015371017945663451 0.0 0.0 7.106021596280214 0.0 6 0.0015371017945663451 0.0 0.0 8.93901548630058 0.0 7 0.0015371017945663451 0.0 0.0 10.642124274680091 0.0 8 0.0015371017945663451 0.0 0.0 13.336663720554894 0.0 9 0.0015371017945663451 0.0 0.0 14.635514736963456 0.0 10 0.0015371017945663451 0.0 0.0 17.81270414633209 0.0 11 0.0015371017945663451 0.0 0.0 25.6403950351612 0.0 12 0.0015371017945663451 0.0 0.0 32.79252968527841 0.0 13 0.0015371017945663451 0.0 0.0 35.09049686815509 0.0 14 0.0015371017945663451 0.0 0.0 35.989701417976406 0.0 15 0.0015371017945663451 0.0 0.0 37.161741536333246 0.0 16 0.0015371017945663451 0.0 0.0 39.91469085040157 0.0 17 0.0015371017945663451 0.0 0.0 43.37701264266226 0.0 18 0.0015371017945663451 0.0 0.0 46.49348653114553 0.0 19 0.0015371017945663451 0.0 0.0 48.23655996618376 0.0 20 0.0015371017945663451 0.0 0.0 49.696038120124506 0.0 21 0.0015371017945663451 0.0 0.0 51.23313991469085 0.0 22 0.0015371017945663451 0.0 0.0 52.649579218383735 0.0 23 0.0015371017945663451 0.0 0.0 53.70403104945625 0.0 24 0.0015371017945663451 0.0 0.0 54.22357145601968 0.0 25 0.0015371017945663451 0.0 0.0 54.56557660531069 0.0 26 0.0015371017945663451 0.0 0.0 54.79921607808477 0.0 27 0.0015371017945663451 0.0 0.0 55.022864389194176 0.0 28 0.0015371017945663451 0.0 0.0 55.22960458056335 0.0 29 0.0015371017945663451 0.0 0.0 55.39791722706836 0.0 30 0.0015371017945663451 0.0 0.0 55.574683933443495 0.0 31 0.0015371017945663451 0.0 0.0 55.72685701110556 0.0 32 0.0015371017945663451 0.0 0.0 55.83983399300619 0.0 33 0.0015371017945663451 0.0 0.0 55.975867501825306 0.0 34 0.0015371017945663451 0.0 0.0 56.10037274718518 0.0 35 0.0015371017945663451 0.0 0.0 56.24024901049072 0.0 36 0.0015371017945663451 0.0 0.0 56.34554048341852 0.0 37 0.0015371017945663451 0.0 0.0 56.47926833954579 0.0 38 0.0015371017945663451 0.0 0.0 56.596088075932826 0.0 39 0.0015371017945663451 0.0 0.0 56.709065057833456 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATGCT 20 7.010218E-4 45.0 9 CTGGGTA 20 7.010218E-4 45.0 5 CGGGGTG 20 7.010218E-4 45.0 6 CTCCTGG 55 1.8189894E-12 45.0 2 ATGATCT 25 3.8716968E-5 45.0 11 GGACCGA 25 3.8716968E-5 45.0 8 CGCTTGG 40 6.7357178E-9 45.0 2 TGCTGCG 20 7.010218E-4 45.0 1 GCGCGGG 20 7.010218E-4 45.0 3 TAGTCTG 20 7.010218E-4 45.0 1 CGGGCTC 25 3.8716968E-5 45.0 6 GTTTATG 20 7.010218E-4 45.0 1 CGGGATC 20 7.010218E-4 45.0 6 GTCTTTG 35 1.2008604E-7 45.0 1 GACCGAT 25 3.8716968E-5 45.0 9 ATGCTAC 20 7.010218E-4 45.0 11 TAGGGTC 20 7.010218E-4 45.0 5 TAGGGAC 45 3.783498E-10 45.0 5 TGTATGG 20 7.010218E-4 45.0 2 GGTATGC 25 3.8716968E-5 45.0 8 >>END_MODULE