##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933637.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 129506 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.842509227371703 33.0 31.0 34.0 30.0 34.0 2 32.06016709650518 33.0 31.0 34.0 30.0 34.0 3 32.15332108164873 33.0 31.0 34.0 30.0 34.0 4 35.76181798526709 37.0 35.0 37.0 35.0 37.0 5 35.87385912621809 37.0 35.0 37.0 35.0 37.0 6 35.871882383827774 37.0 35.0 37.0 35.0 37.0 7 35.83286488656896 37.0 35.0 37.0 35.0 37.0 8 35.67393016539774 37.0 35.0 37.0 33.0 37.0 9 37.4875913085108 39.0 37.0 39.0 34.0 39.0 10 37.07058360230414 39.0 37.0 39.0 33.0 39.0 11 37.126194925331646 39.0 37.0 39.0 33.0 39.0 12 37.180972310163234 39.0 37.0 39.0 34.0 39.0 13 37.15003938041481 39.0 37.0 39.0 33.0 39.0 14 38.22726360168641 40.0 38.0 41.0 33.0 41.0 15 38.203921053850785 40.0 37.0 41.0 33.0 41.0 16 38.37381279631832 40.0 38.0 41.0 34.0 41.0 17 38.45492100752089 40.0 38.0 41.0 34.0 41.0 18 38.14386206044507 39.0 38.0 40.0 34.0 41.0 19 37.74361033465631 38.0 37.0 40.0 34.0 41.0 20 37.09500718113446 38.0 35.0 40.0 34.0 41.0 21 36.98681914351459 38.0 35.0 40.0 33.0 41.0 22 36.99164517474094 38.0 35.0 40.0 33.0 41.0 23 36.87687829135329 38.0 35.0 40.0 33.0 41.0 24 36.76133152131948 38.0 35.0 40.0 33.0 41.0 25 36.66525875249023 38.0 35.0 40.0 33.0 41.0 26 36.67644742328541 38.0 35.0 40.0 33.0 41.0 27 36.63220236900221 38.0 35.0 40.0 33.0 41.0 28 36.599107377264374 38.0 35.0 40.0 33.0 41.0 29 36.40936327274412 38.0 35.0 40.0 32.0 41.0 30 36.16190755640665 38.0 35.0 40.0 31.0 41.0 31 35.780458048275754 38.0 35.0 40.0 30.0 41.0 32 35.313390885364385 38.0 35.0 40.0 27.0 41.0 33 34.68674810433493 38.0 35.0 40.0 22.0 41.0 34 34.28072830602443 38.0 35.0 40.0 18.0 41.0 35 33.98935184470218 38.0 34.0 40.0 16.0 41.0 36 33.77854307908514 38.0 34.0 40.0 15.0 41.0 37 33.56808950936636 38.0 33.0 40.0 13.0 41.0 38 33.260296820224546 37.0 33.0 40.0 12.0 41.0 39 33.200129723719364 38.0 33.0 40.0 10.0 41.0 40 33.17158278380924 38.0 33.0 40.0 10.0 41.0 41 33.08713109817306 38.0 33.0 40.0 10.0 41.0 42 32.85258598057233 37.0 33.0 40.0 10.0 41.0 43 32.680841042113876 37.0 32.0 40.0 10.0 41.0 44 32.53464704338023 37.0 31.0 40.0 10.0 41.0 45 32.46761540005868 37.0 31.0 40.0 10.0 41.0 46 32.11648108967924 37.0 31.0 40.0 9.0 41.0 47 32.00123546399394 36.0 31.0 40.0 10.0 41.0 48 31.937354253856963 36.0 30.0 40.0 8.0 41.0 49 32.01509582567603 36.0 31.0 40.0 8.0 41.0 50 31.815282689605116 36.0 30.0 40.0 8.0 41.0 51 30.849219341188824 35.0 27.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 2.0 11 2.0 12 3.0 13 2.0 14 6.0 15 6.0 16 10.0 17 33.0 18 53.0 19 80.0 20 185.0 21 287.0 22 477.0 23 772.0 24 1416.0 25 2803.0 26 4045.0 27 4228.0 28 3904.0 29 3526.0 30 3451.0 31 3758.0 32 4174.0 33 4867.0 34 7023.0 35 10533.0 36 13950.0 37 14787.0 38 24943.0 39 20172.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.551897209395705 4.622951832347536 36.81219402962025 37.01295692863651 2 43.02735008416598 4.71406730190107 35.88791252914923 16.37067008478372 3 17.536639229070467 4.778156996587031 59.770203697126 17.9150000772165 4 13.851095702129632 4.61368585239294 61.177088320232265 20.358130125245165 5 11.494448133677205 5.331027133877967 61.880530631785405 21.29399410065943 6 15.158371040723981 6.9070158911556225 66.14442574089232 11.790187327228082 7 56.54023751795284 2.6160950071811344 35.31342177196423 5.530245702901796 8 54.0700816950566 2.9627970904822942 35.554337250783746 7.412783963677358 9 49.117415409324664 4.985869380569239 37.92025079919077 7.976464410915324 10 24.72626750884129 16.91504640711627 43.089123283863294 15.269562800179143 11 15.297360740042931 14.411687489382732 47.05959569440798 23.231356076166353 12 13.566938983521998 12.36390591941686 54.36890954859235 19.700245548468796 13 17.971368121940294 14.180037990517814 54.80827143143947 13.040322456102421 14 15.403919509520794 16.226275230491254 52.773616666409275 15.596188593578674 15 10.11536145043473 14.834833907309314 55.546461167822336 19.503343474433617 16 8.666779917532779 14.891201952033112 52.25086096397078 24.19115716646333 17 8.763300542059827 14.81012462743039 50.38685466310441 26.039720167405374 18 10.119994440412029 13.899742096891263 54.744953901749724 21.235309560946984 19 10.94543882136735 16.137476255926366 55.63371581239479 17.28336911031149 20 10.798727472086235 20.05003629175482 53.02148163019474 16.1297546059642 21 9.748583077231942 21.605176594134633 52.548916652510314 16.097323676123114 22 8.098466480317516 19.9689589671521 49.732058746312916 22.20051580621747 23 8.763300542059827 20.73340231340633 46.57467607678409 23.928621067749756 24 10.719194477475948 19.58596512902877 46.355381217858636 23.33945917563665 25 9.050545920652326 22.234491066050992 44.69445431099717 24.020508702299505 26 8.27065927447377 22.356493135453185 47.632542121600544 21.740305468472503 27 11.331521319475545 20.763516748258766 48.83557518570568 19.069386746560006 28 9.503034608435131 17.79531450280296 49.22397417880253 23.477676709959383 29 10.789461492131638 16.63938350346702 48.634812286689424 23.93634271771192 30 16.772968047812455 17.989127916853274 45.719889425972546 19.518014609361728 31 17.136657761030378 23.794264358408103 39.87768906459932 19.191388815962195 32 14.178493660525382 24.08845922196655 39.06768798356833 22.66535913393974 33 16.82779176254382 17.70033820826834 39.10706839837537 26.364801630812472 34 17.6748567633932 15.479591679150001 41.3370809074483 25.50847065000849 35 15.43943909934675 16.383796889719395 42.2412861180177 25.935477892916158 36 17.523512424134786 16.110450481058795 41.780303615276516 24.585733479529907 37 20.917949747502046 19.001436226892963 37.22839096258088 22.85222306302411 38 21.584328139236792 23.581918984448595 34.730437199820855 20.103315676493754 39 18.087192871372753 20.134202276342407 42.10615724367983 19.672447608605008 40 18.255524840547928 14.990039071548807 48.65566074158726 18.098775346316 41 20.31643321544948 15.227093725387242 41.46371596682779 22.992757092335488 42 22.726360168640834 14.587741108520069 36.94500640896947 25.74089231386963 43 19.303352740413573 15.31512053495591 39.46921378160086 25.912312943029665 44 17.76056707797322 16.101184501104196 40.00432412397881 26.13392429694377 45 20.82297345296743 14.00707303136534 40.28462001760536 24.885333498061865 46 23.205102466294996 14.412459654378948 44.48751409201118 17.894923787314873 47 16.671042268311894 18.514972279276638 45.633406946396306 19.180578506015163 48 16.17067935076367 17.728136148132133 44.5214893518447 21.579695149259493 49 20.701743548561456 12.661189442960172 45.45658116226276 21.180485846215618 50 20.182848671104043 10.669003752721881 41.594984016184576 27.553163559989496 51 17.477182524361805 10.480595493645083 38.08394977838865 33.958272203604466 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 274.0 1 424.0 2 574.0 3 7366.0 4 14158.0 5 8491.5 6 2825.0 7 2627.0 8 2429.0 9 2379.0 10 2329.0 11 2247.0 12 2165.0 13 2009.0 14 1853.0 15 1692.0 16 1531.0 17 1407.0 18 1283.0 19 1176.5 20 1070.0 21 986.0 22 902.0 23 838.5 24 775.0 25 722.5 26 615.5 27 561.0 28 557.0 29 553.0 30 591.0 31 629.0 32 717.0 33 805.0 34 892.5 35 980.0 36 1110.5 37 1241.0 38 1443.5 39 1646.0 40 2324.0 41 3002.0 42 3990.5 43 4979.0 44 6076.0 45 7173.0 46 9881.5 47 12590.0 48 15530.5 49 18471.0 50 18614.5 51 18758.0 52 15007.0 53 11256.0 54 8225.0 55 5194.0 56 3807.0 57 2420.0 58 1979.5 59 1539.0 60 1370.5 61 1202.0 62 1112.5 63 1023.0 64 932.0 65 841.0 66 711.0 67 581.0 68 493.0 69 405.0 70 344.0 71 283.0 72 253.0 73 223.0 74 179.5 75 116.0 76 96.0 77 69.5 78 43.0 79 33.5 80 24.0 81 16.5 82 9.0 83 6.0 84 3.0 85 1.5 86 0.0 87 1.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 129506.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.69880932157583 #Duplication Level Percentage of deduplicated Percentage of total 1 77.16957568003899 39.124056028292124 2 11.08166560053611 11.236545024940929 3 4.665082701270219 7.095424150232422 4 2.433823753388772 4.935678655815175 5 1.2565110116055926 3.185180609392615 6 0.8041670474275793 2.4462187080135283 7 0.5635261506594779 1.999907340200454 8 0.354869170550428 1.4393155529473538 9 0.25587133327241157 1.167513474279184 >10 1.3022023211185234 11.918366716600003 >50 0.07310609522068902 2.626905317128164 >100 0.031983916659051446 2.895618735811468 >500 0.006092174601724086 2.2253795190956405 >1k 0.0 0.0 >5k 0.0015230436504310215 7.703890167250939 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9977 7.703890167250939 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCC 901 0.6957206615909688 No Hit CCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 734 0.5667691072228314 TruSeq Adapter, Index 27 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGCT 727 0.5613639522493166 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 520 0.40152579803252364 TruSeq Adapter, Index 27 (95% over 22bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGC 494 0.3814495081308974 No Hit GCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 483 0.3729556931725171 TruSeq Adapter, Index 27 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 240 0.18531959909193396 No Hit GGCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCT 181 0.13976186431516685 No Hit CGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 181 0.13976186431516685 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCG 175 0.13512887433786852 No Hit GCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 160 0.12354639939462263 TruSeq Adapter, Index 27 (95% over 21bp) GTGCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTC 158 0.12200206940218986 No Hit GTGTGTGTGTGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGC 153 0.1181412444211079 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 152 0.11736907942489151 No Hit TGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 150 0.11582474943245871 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 144 0.11119175945516037 No Hit TTCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCT 134 0.10347010949299645 No Hit GTTCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTC 133 0.10269794449678007 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 132 0.10192577950056368 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 130 0.10038144950813091 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5937948820904051 0.0 2 0.0 0.0 0.0 2.0778960048183097 0.0 3 0.0 0.0 0.0 3.0284311151606875 0.0 4 0.0 0.0 0.0 4.360415733633963 0.0 5 0.0 0.0 0.0 7.128627245069726 0.0 6 0.0 0.0 0.0 8.9787345760042 0.0 7 0.0 0.0 0.0 10.730004787422976 0.0 8 0.0 0.0 0.0 13.427177119206831 0.0 9 0.0 0.0 0.0 14.723642147854154 0.0 10 0.0 0.0 0.0 17.976001111917594 0.0 11 0.0 0.0 0.0 25.629700554414466 0.0 12 0.0 0.0 0.0 32.60235047024848 0.0 13 0.0 0.0 0.0 34.87251555912467 0.0 14 0.0 0.0 0.0 35.69795994008 0.0 15 0.0 0.0 0.0 36.8569795994008 0.0 16 0.0 0.0 0.0 39.5325313112906 0.0 17 0.0 0.0 0.0 43.04047688910166 0.0 18 0.0 0.0 0.0 46.040337899402346 0.0 19 0.0 0.0 0.0 47.73678439608975 0.0 20 0.0 0.0 0.0 49.161428814109 0.0 21 0.0 0.0 0.0 50.70807530153043 0.0 22 0.0 0.0 0.0 52.07326301484101 0.0 23 0.0 0.0 0.0 53.08788781986935 0.0 24 0.0 0.0 0.0 53.57049094250459 0.0 25 0.0 0.0 0.0 53.914876530817104 0.0 26 0.0 0.0 0.0 54.17509613454203 0.0 27 0.0 0.0 0.0 54.40056831343721 0.0 28 0.0 0.0 0.0 54.61368585239294 0.0 29 0.0 0.0 0.0 54.78742297654163 0.0 30 0.0 0.0 0.0 54.968109585656265 0.0 31 0.0 0.0 0.0 55.114048769941164 0.0 32 0.0 0.0 0.0 55.248405479282816 0.0 33 0.0 0.0 0.0 55.38585084860933 0.0 34 0.0 0.0 0.0 55.52870137290936 0.0 35 0.0 0.0 0.0 55.654564267292635 0.0 36 0.0 0.0 0.0 55.76730035674023 0.0 37 0.0 0.0 0.0 55.88466943616512 0.0 38 0.0 0.0 0.0 56.00976016555217 0.0 39 0.0 0.0 0.0 56.150294194863555 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCTA 20 7.0100965E-4 45.000004 13 TTGTTAG 20 7.0100965E-4 45.000004 1 GGCCGAT 20 7.0100965E-4 45.000004 8 TGTTTAG 20 7.0100965E-4 45.000004 1 GGCCTAA 20 7.0100965E-4 45.000004 8 TCTGAGG 20 7.0100965E-4 45.000004 2 GCGTTGG 20 7.0100965E-4 45.000004 2 CGTGTTT 20 7.0100965E-4 45.000004 1 TGAGGGC 20 7.0100965E-4 45.000004 4 GTAGGGC 20 7.0100965E-4 45.000004 4 GAGAGGA 20 7.0100965E-4 45.000004 32 CTTGAGG 20 7.0100965E-4 45.000004 2 CTACTGG 20 7.0100965E-4 45.000004 2 GTGCTTG 40 6.7338988E-9 45.000004 1 GGGCCGA 20 7.0100965E-4 45.000004 7 TAGCGGG 25 3.8715967E-5 45.0 3 GCGGGAA 25 3.8715967E-5 45.0 5 CTGGGTA 35 1.2007877E-7 45.0 5 GCTAGAG 25 3.8715967E-5 45.0 6 AGGGACC 25 3.8715967E-5 45.0 6 >>END_MODULE