SRR2933633.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933633.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	335367
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9383	2.797830436506872	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCC	460	0.13716316751499105	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCGTG	40	6.7902874E-9	45.000004	1
TTCGTAC	20	7.0261327E-4	45.000004	33
AATTCGT	20	7.0261327E-4	45.000004	31
TCGTACA	20	7.0261327E-4	45.000004	34
TACGGGA	30	2.1608885E-6	44.999996	4
TGTTCCG	25	3.884879E-5	44.999996	1
CGGTAAC	25	3.884879E-5	44.999996	31
ACGGTAA	25	3.884879E-5	44.999996	30
CGTTTTT	6750	0.0	44.366665	1
GCGATTG	65	0.0	41.53846	9
TGTTGCG	55	6.002665E-11	40.909092	1
TGCGGGC	220	0.0	39.886364	4
TCCGGGT	85	0.0	39.705883	4
TTGCTCG	40	3.4484583E-7	39.375004	1
TGCTGCG	40	3.4484583E-7	39.375004	1
CGGGCAC	80	0.0	39.375004	6
GTTTTTT	8060	0.0	38.858562	2
CTGTTCG	35	6.2350628E-6	38.57143	1
CGCTTTC	35	6.2350628E-6	38.57143	45
GGCGATT	305	0.0	38.360657	8