SRR2933632.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933632.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	162764
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6800	4.177828020938291	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCC	782	0.4804502224079034	No Hit
CTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGCT	524	0.3219385122017154	No Hit
GCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC	461	0.28323216436066945	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGC	452	0.27770268609766285	No Hit
TCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC	419	0.2574279324666388	No Hit
CCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC	402	0.24698336241429308	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGC	395	0.2426826570986213	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCG	344	0.21134894694158413	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTC	305	0.1873878744685557	No Hit
TCCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTG	173	0.10628885994445945	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGGGCG	25	3.876014E-5	45.0	5
GCGGGAA	55	1.8189894E-12	45.0	5
CCTATTA	20	7.015433E-4	45.0	15
GTTTGCG	20	7.015433E-4	45.0	1
CATTGAC	20	7.015433E-4	45.0	13
GTGCAGG	25	3.876014E-5	45.0	2
TTCGTTG	20	7.015433E-4	45.0	1
TGCGCGG	35	1.2033524E-7	45.0	2
GGCGCGA	20	7.015433E-4	45.0	8
ACCATAT	20	7.015433E-4	45.0	13
GCCTAGG	20	7.015433E-4	45.0	2
GGACCAT	20	7.015433E-4	45.0	7
GCGGCGA	25	3.876014E-5	45.0	9
TGTTTCG	20	7.015433E-4	45.0	1
TGCTGCG	20	7.015433E-4	45.0	1
AGGGTAG	20	7.015433E-4	45.0	6
GCGCGAC	20	7.015433E-4	45.0	9
CGTAGAG	25	3.876014E-5	45.0	38
AGGGACC	35	1.2033524E-7	45.0	6
CTGAATG	25	3.876014E-5	45.0	5