SRR2933631.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933631.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	163085
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6579	4.034092651071527	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCC	853	0.5230401324462703	No Hit
CTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGCT	551	0.3378606248275439	No Hit
GCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC	488	0.29923046264218045	No Hit
TCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC	473	0.2900328049789987	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGC	471	0.28880645062390775	No Hit
CCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC	434	0.2661188950547261	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGC	352	0.21583836649599902	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTC	300	0.18395315326363554	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCG	288	0.1765950271330901	No Hit
TTCCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCT	183	0.11221142349081767	No Hit
TCCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTG	168	0.1030137658276359	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTGCGG	45	3.8016879E-10	45.0	2
ATGGGTA	20	7.015471E-4	45.0	5
ATCCTAG	20	7.015471E-4	45.0	14
TTAGGGA	40	6.7539077E-9	45.0	4
CCGGGCT	20	7.015471E-4	45.0	5
CTCGTGG	20	7.015471E-4	45.0	2
GGTGTGA	20	7.015471E-4	45.0	9
AGGGTAG	20	7.015471E-4	45.0	6
TCCTAGC	20	7.015471E-4	45.0	15
CTGCGGG	45	3.8016879E-10	45.0	3
GATGGGA	20	7.015471E-4	45.0	4
GCTTAGG	20	7.015471E-4	45.0	2
GGAACAA	40	6.7539077E-9	45.0	8
TAGGGCG	20	7.015471E-4	45.0	5
TAGGGAA	20	7.015471E-4	45.0	5
CTTCTCG	20	7.015471E-4	45.0	1
TTGCATG	20	7.015471E-4	45.0	1
ATATTGG	20	7.015471E-4	45.0	2
CTGTGCG	20	7.015471E-4	45.0	1
TCCGGGC	45	3.8016879E-10	45.0	4