##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933630.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 135449 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.871996101853835 33.0 31.0 34.0 30.0 34.0 2 32.02703600617207 33.0 31.0 34.0 30.0 34.0 3 32.15063972417663 33.0 31.0 34.0 30.0 34.0 4 35.82885809419043 37.0 35.0 37.0 35.0 37.0 5 35.81991745970808 37.0 35.0 37.0 35.0 37.0 6 35.706420866894554 37.0 35.0 37.0 35.0 37.0 7 35.80527726302889 37.0 35.0 37.0 35.0 37.0 8 35.47179381169296 37.0 35.0 37.0 33.0 37.0 9 37.350190846739366 39.0 37.0 39.0 34.0 39.0 10 36.973569387740035 39.0 37.0 39.0 33.0 39.0 11 37.01907729108373 39.0 37.0 39.0 33.0 39.0 12 36.98698403088986 39.0 37.0 39.0 33.0 39.0 13 36.841623046312634 39.0 37.0 39.0 33.0 39.0 14 37.67131540284535 40.0 37.0 41.0 32.0 41.0 15 37.76614814432 40.0 37.0 41.0 32.0 41.0 16 37.91551801785174 40.0 37.0 41.0 33.0 41.0 17 37.88493824243811 40.0 37.0 41.0 33.0 41.0 18 37.673987995481696 39.0 37.0 40.0 33.0 41.0 19 37.40325879113172 38.0 37.0 40.0 33.0 41.0 20 36.849854926946676 38.0 35.0 40.0 32.0 41.0 21 36.77855133666546 38.0 35.0 40.0 32.0 41.0 22 36.8348751190485 38.0 35.0 40.0 32.0 41.0 23 36.71547962701829 38.0 35.0 40.0 32.0 41.0 24 36.626073282194774 38.0 35.0 40.0 32.0 41.0 25 36.55383945248765 38.0 35.0 40.0 32.0 41.0 26 36.4972498874115 38.0 35.0 40.0 32.0 41.0 27 36.41165309452266 38.0 35.0 40.0 31.0 41.0 28 36.30016463761268 38.0 35.0 40.0 31.0 41.0 29 36.18347126962916 38.0 35.0 40.0 31.0 41.0 30 36.06886724892764 38.0 35.0 40.0 31.0 41.0 31 35.78642884037534 38.0 35.0 40.0 30.0 41.0 32 35.31168188764775 38.0 35.0 40.0 27.0 41.0 33 35.03801430796831 38.0 35.0 40.0 24.0 41.0 34 34.66986836373838 38.0 34.0 40.0 22.0 41.0 35 34.28871383325089 38.0 34.0 40.0 19.0 41.0 36 34.16810755339648 38.0 34.0 40.0 18.0 41.0 37 33.976633271563465 38.0 33.0 40.0 18.0 41.0 38 33.87427740330309 38.0 33.0 40.0 18.0 41.0 39 33.85571691190042 38.0 33.0 40.0 17.0 41.0 40 33.70205021816329 38.0 33.0 40.0 15.0 41.0 41 33.387887692046455 37.0 33.0 40.0 15.0 41.0 42 33.27292929442078 37.0 33.0 40.0 15.0 41.0 43 33.26728879504463 37.0 33.0 40.0 15.0 41.0 44 33.2262032204003 37.0 33.0 40.0 15.0 41.0 45 33.24863232655834 37.0 33.0 40.0 15.0 41.0 46 32.996589122105 37.0 32.0 40.0 13.0 41.0 47 32.76637701275018 36.0 32.0 40.0 12.0 41.0 48 32.723305450760066 36.0 31.0 40.0 12.0 41.0 49 32.820596682146046 36.0 32.0 40.0 12.0 41.0 50 32.72605187192227 36.0 32.0 40.0 12.0 41.0 51 31.654327459043625 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 1.0 12 4.0 13 1.0 14 6.0 15 13.0 16 20.0 17 26.0 18 50.0 19 139.0 20 229.0 21 397.0 22 629.0 23 1025.0 24 1443.0 25 2352.0 26 3291.0 27 3482.0 28 3426.0 29 3392.0 30 3342.0 31 4083.0 32 4716.0 33 6296.0 34 8982.0 35 11195.0 36 14076.0 37 17274.0 38 26818.0 39 18730.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.157084954484713 4.753080495241751 37.45764088328448 30.63219366698905 2 35.02351438548826 10.291696505695871 36.70901963100503 17.97576947781084 3 17.279566478896115 10.235586826037844 54.50833893199655 17.976507763069492 4 14.637243538158273 5.005574053702869 59.82989907640515 20.527283331733713 5 16.77014965042193 5.840574681245339 55.45925034514836 21.93002532318437 6 16.29543222910468 11.124482277462366 58.83247569195787 13.747609801475095 7 57.1329430265266 2.890386787647011 33.48640447696181 6.490265708864591 8 54.160606575168515 7.658232988061927 29.794978183670608 8.386182253098951 9 49.38833066320164 5.939504905905544 32.22024525836293 12.451919172529882 10 29.230189960797055 17.796366159956882 37.38381235741866 15.589631521827405 11 21.77129399257285 16.868341589823476 40.0032484551381 21.357115962465578 12 17.98241404513876 14.186889530376748 46.55110041417803 21.279596010306463 13 21.77424713360748 16.11159919969878 47.94055327097284 14.173600395720898 14 16.333823062554913 20.293246904739053 45.48427821541687 17.888651817289166 15 11.837665837326226 17.42057896329984 49.56699569579694 21.174759503576993 16 12.76790526323561 18.676402188277507 43.19707048409364 25.358622064393238 17 12.804081240909863 19.774970653160967 43.01914373675701 24.40180436917216 18 14.214944370205759 17.02928777621097 46.17383664700367 22.581931206579597 19 13.612503599140634 19.79047464359279 45.33071488161596 21.266306875650614 20 14.909670798603164 23.887219543887365 44.445510856484724 16.757598801024738 21 13.984599369504389 25.552791087420356 43.95824258577029 16.504366957304963 22 10.993805786679857 22.038553256207134 43.006592887359815 23.96104806975319 23 12.404668915975755 23.619221994994426 40.69649831301818 23.279610776011637 24 14.754630894284935 23.057386913155504 38.38271231238326 23.8052698801763 25 13.040332523680501 26.296982628147862 36.247591344343626 24.415093503828007 26 12.86388234686118 22.745830534001726 41.52854579952602 22.86174131961107 27 17.154796270182874 21.64061750179034 40.51118871309497 20.693397514931817 28 11.323081012041433 21.760957998951636 40.601259514651275 26.31470147435566 29 15.065448988180052 20.28660233741113 40.69871316879416 23.94923550561466 30 21.75062200533042 21.394768510657148 36.723785336178196 20.13082414783424 31 19.7779237941956 24.543555138834545 31.56538623393307 24.11313483303679 32 18.37370523222763 27.072920434997677 31.744051266528363 22.809323066246336 33 21.26409201987464 19.847322608509476 31.130536216583366 27.75804915503252 34 19.823697480232415 19.726982111348182 34.103610953200096 26.345709455219307 35 19.596305620565673 22.77388537383074 33.790578003529006 23.83923100207458 36 22.88758130366411 21.412487356864947 34.212877171481516 21.487054167989427 37 21.942576172581564 24.361198679945957 31.31289267547195 22.383332472000532 38 17.741733050816176 27.340179698631957 28.0784649572902 26.839622293261673 39 21.239728606338918 22.80710821047036 30.593064548280164 25.360098634910557 40 24.265959881579043 20.677893524499996 31.404440047545574 23.65170654637539 41 21.908615050683284 24.387038663998997 30.70823704863085 22.99610923668687 42 19.796380925662056 23.040406352206368 37.423679761386204 19.739532960745372 43 19.50549653375071 19.277366388825314 39.17120096863026 22.045936108793715 44 20.06068704826171 18.822582669491837 34.1619354886341 26.954794793612358 45 22.47635641459147 17.023381494141706 31.772844391616033 28.727417699650793 46 24.15817023381494 20.00826879489697 34.73853627564619 21.0950246956419 47 16.214959135910934 23.394044991103662 40.07117069893466 20.31982517405075 48 17.436821238990323 22.449778145279772 37.876248624943706 22.2371519907862 49 21.396983366433123 17.46266122304336 40.19446433713058 20.94589107339294 50 20.547217033717487 15.673796041314441 35.93529667993119 27.84369024503688 51 18.286587571705955 16.04736838219551 33.002089347282 32.663954698816525 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 534.0 1 768.0 2 1002.0 3 5035.0 4 9068.0 5 5585.0 6 2102.0 7 2004.5 8 1907.0 9 1866.5 10 1826.0 11 1768.0 12 1710.0 13 1600.0 14 1490.0 15 1405.0 16 1320.0 17 1192.5 18 1065.0 19 1021.5 20 978.0 21 900.0 22 822.0 23 796.0 24 770.0 25 750.0 26 742.5 27 755.0 28 777.0 29 799.0 30 837.0 31 875.0 32 936.0 33 997.0 34 1174.5 35 1352.0 36 1446.5 37 1541.0 38 1769.5 39 1998.0 40 2802.5 41 3607.0 42 4674.5 43 5742.0 44 6429.5 45 7117.0 46 11530.0 47 15943.0 48 16965.5 49 17988.0 50 17732.5 51 17477.0 52 14226.5 53 10976.0 54 8674.5 55 6373.0 56 5321.0 57 4269.0 58 3669.0 59 3069.0 60 2712.5 61 2356.0 62 2105.5 63 1855.0 64 1700.0 65 1545.0 66 1337.5 67 1130.0 68 972.5 69 815.0 70 672.5 71 530.0 72 462.5 73 395.0 74 334.0 75 223.5 76 174.0 77 135.5 78 97.0 79 68.0 80 39.0 81 31.0 82 23.0 83 16.0 84 9.0 85 6.5 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 135449.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.51609831006504 #Duplication Level Percentage of deduplicated Percentage of total 1 79.7808394063514 44.29120923742516 2 11.20671312303846 12.443059749425982 3 4.226288632374063 7.038811656047664 4 1.9070163306558858 4.234804243663667 5 0.8737166870578221 2.4252670746923197 6 0.45215171019735095 1.5061019276628105 7 0.29522846959944676 1.1472952919549055 8 0.21410713335815734 0.9509114131518136 9 0.14362466088621736 0.7176132714158097 >10 0.7925953508165329 7.782264911516512 >50 0.05984360870259056 2.3012351512377354 >100 0.034576307250385664 3.647129177771707 >500 0.007979147827012076 3.860493617523939 >1k 0.003989573913506038 2.9686450250647844 >5k 0.0013298579711686792 4.685158251445194 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6346 4.685158251445194 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCC 1742 1.2860929205826548 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG 1200 0.8859423103898885 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC 1079 0.7966097940922413 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTC 979 0.7227812682264173 No Hit CTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGCT 963 0.7109687040878855 No Hit CCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 962 0.7102304188292272 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC 872 0.6437847455499855 No Hit GCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 792 0.5847219248573263 No Hit TCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 661 0.48800655597309683 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCACGATT 405 0.29900552975658734 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 383 0.2827632540661061 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCT 328 0.24215756483990286 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTC 324 0.2392044238052699 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG 317 0.2340364269946622 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTA 278 0.2052433019069908 No Hit TCCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 255 0.1882627409578513 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 231 0.17054389475005352 No Hit GAACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCT 203 0.1498719075076228 No Hit CGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 187 0.13805934336909095 No Hit GCCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 176 0.1299382055238503 No Hit TTCCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCT 172 0.12698506448921734 No Hit TGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 156 0.11517250035068549 No Hit CGTTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATG 136 0.10040679517752069 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTC 136 0.10040679517752069 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8187583518519885 0.0 2 0.0 0.0 0.0 2.8918633581643274 0.0 3 0.0 0.0 0.0 3.888548457352952 0.0 4 0.0 0.0 0.0 5.302364727683482 0.0 5 0.0 0.0 0.0 8.621695250610932 0.0 6 0.0 0.0 0.0 10.4644552562219 0.0 7 0.0 0.0 0.0 12.493263147014744 0.0 8 0.0 0.0 0.0 15.196125478962562 0.0 9 0.0 0.0 0.0 16.37516703703977 0.0 10 0.0 0.0 0.0 19.94108483635907 0.0 11 0.0 0.0 0.0 25.935222851405324 0.0 12 0.0 0.0 0.0 31.436924598926534 0.0 13 0.0 0.0 0.0 33.16598867470413 0.0 14 0.0 0.0 0.0 33.958907042503085 0.0 15 0.0 0.0 0.0 35.08110063566361 0.0 16 0.0 0.0 0.0 37.128365657922906 0.0 17 0.0 0.0 0.0 39.48054249200806 0.0 18 0.0 0.0 0.0 41.59277661702929 0.0 19 0.0 0.0 0.0 43.20371505142157 0.0 20 0.0 0.0 0.0 44.347318917083186 0.0 21 0.0 0.0 0.0 45.53595818352295 0.0 22 0.0 0.0 0.0 46.591706103404235 0.0 23 7.382852586582403E-4 0.0 0.0 47.32260850947589 0.0 24 7.382852586582403E-4 0.0 0.0 47.729403686996584 0.0 25 7.382852586582403E-4 0.0 0.0 48.02840921675317 0.0 26 7.382852586582403E-4 0.0 0.0 48.26318392900649 0.0 27 7.382852586582403E-4 0.0 0.0 48.540779186261986 0.0 28 7.382852586582403E-4 0.0 0.0 48.70984651049473 0.0 29 7.382852586582403E-4 0.0 0.0 48.909921815591105 0.0 30 7.382852586582403E-4 0.0 0.0 49.10261426810091 0.0 31 7.382852586582403E-4 0.0 0.0 49.247318178797926 0.0 32 7.382852586582403E-4 0.0 0.0 49.414170647254686 0.0 33 7.382852586582403E-4 0.0 0.0 49.560351128469016 0.0 34 7.382852586582403E-4 0.0 0.0 49.74861386942687 0.0 35 7.382852586582403E-4 0.0 0.0 49.912513196849 0.0 36 7.382852586582403E-4 0.0 0.0 50.0520491107354 0.0 37 7.382852586582403E-4 0.0 0.0 50.1812490310006 0.0 38 7.382852586582403E-4 0.0 0.0 50.38132433609698 0.0 39 7.382852586582403E-4 0.0 0.0 50.727580122407694 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 20 7.011233E-4 45.000004 1 TCGCATT 20 7.011233E-4 45.000004 22 ACACGTG 55 1.8189894E-12 45.000004 42 TTTGTCG 25 3.8725375E-5 45.000004 1 ATGGAAG 20 7.011233E-4 45.000004 40 TATGGAA 20 7.011233E-4 45.000004 39 GGGTAAC 20 7.011233E-4 45.000004 7 TCGGGTA 20 7.011233E-4 45.000004 5 CCTACAC 45 3.8016879E-10 45.000004 28 ATTCGAG 20 7.011233E-4 45.000004 14 GTAGGAT 20 7.011233E-4 45.000004 33 ATTTTGA 20 7.011233E-4 45.000004 26 GGGAATC 25 3.8725375E-5 45.000004 7 CTCGGGT 20 7.011233E-4 45.000004 4 TAATTAT 45 3.8016879E-10 45.000004 40 TTAAGCA 20 7.011233E-4 45.000004 45 CGAGGGC 20 7.011233E-4 45.000004 4 ACGTGAG 55 1.8189894E-12 45.000004 44 TCCCGGG 20 7.011233E-4 45.000004 3 ATTGGGA 45 3.8016879E-10 45.000004 4 >>END_MODULE