##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933629.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 136312 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.816487176477494 33.0 31.0 34.0 30.0 34.0 2 31.993074710957217 33.0 31.0 34.0 30.0 34.0 3 32.13000322788896 33.0 31.0 34.0 30.0 34.0 4 35.75460707788016 37.0 35.0 37.0 35.0 37.0 5 35.82127032102823 37.0 35.0 37.0 35.0 37.0 6 35.735782616350726 37.0 35.0 37.0 35.0 37.0 7 35.72697928282176 37.0 35.0 37.0 35.0 37.0 8 35.45087739890839 37.0 35.0 37.0 33.0 37.0 9 37.31716209871471 39.0 37.0 39.0 34.0 39.0 10 37.03984242032983 39.0 37.0 39.0 33.0 39.0 11 37.0566714595927 39.0 37.0 39.0 33.0 39.0 12 36.98495363577675 39.0 37.0 39.0 33.0 39.0 13 36.86062855801397 39.0 37.0 39.0 33.0 39.0 14 37.713282763072954 40.0 37.0 41.0 33.0 41.0 15 37.78153060625623 40.0 37.0 41.0 32.0 41.0 16 38.02702623393392 40.0 37.0 41.0 33.0 41.0 17 38.0136158225248 40.0 37.0 41.0 33.0 41.0 18 37.86359968307999 39.0 37.0 40.0 33.0 41.0 19 37.623158636070194 39.0 37.0 40.0 33.0 41.0 20 37.04695844826574 39.0 35.0 40.0 33.0 41.0 21 37.02099595046658 38.0 35.0 40.0 33.0 41.0 22 37.04568196490404 38.0 35.0 40.0 33.0 41.0 23 36.84386554375257 38.0 35.0 40.0 32.0 41.0 24 36.755377369563945 38.0 35.0 40.0 32.0 41.0 25 36.72035477434122 38.0 35.0 40.0 32.0 41.0 26 36.70274810728329 38.0 35.0 40.0 32.0 41.0 27 36.612763366394745 38.0 35.0 40.0 32.0 41.0 28 36.57121896824931 38.0 35.0 40.0 32.0 41.0 29 36.38243881683197 38.0 35.0 40.0 31.0 41.0 30 36.19114971535888 38.0 35.0 40.0 31.0 41.0 31 35.9251203122249 38.0 35.0 40.0 30.0 41.0 32 35.55008363166853 38.0 35.0 40.0 29.0 41.0 33 35.17375579552791 38.0 35.0 40.0 25.0 41.0 34 34.80463935676976 38.0 35.0 40.0 22.0 41.0 35 34.502545630612126 38.0 34.0 40.0 21.0 41.0 36 34.311491284699805 38.0 34.0 40.0 18.0 41.0 37 34.16459299254651 38.0 34.0 40.0 18.0 41.0 38 34.056422031809376 38.0 34.0 40.0 18.0 41.0 39 34.061307881917955 38.0 34.0 40.0 18.0 41.0 40 33.91457098421269 38.0 33.0 40.0 18.0 41.0 41 33.650522331122716 37.0 33.0 40.0 15.0 41.0 42 33.43197224015494 37.0 33.0 40.0 15.0 41.0 43 33.43159809847996 37.0 33.0 40.0 15.0 41.0 44 33.39552643934503 37.0 33.0 40.0 15.0 41.0 45 33.403962967310285 37.0 33.0 40.0 15.0 41.0 46 33.14052321145607 37.0 33.0 40.0 15.0 41.0 47 33.00281706672927 37.0 32.0 40.0 13.0 41.0 48 32.944428957098424 36.0 32.0 40.0 13.0 41.0 49 33.019660778214686 37.0 32.0 40.0 13.0 41.0 50 32.83030107400669 36.0 32.0 40.0 12.0 41.0 51 31.877032102822934 35.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 6.0 12 8.0 13 8.0 14 14.0 15 10.0 16 15.0 17 30.0 18 63.0 19 120.0 20 249.0 21 386.0 22 655.0 23 987.0 24 1458.0 25 2211.0 26 3149.0 27 3462.0 28 3505.0 29 3248.0 30 3347.0 31 3792.0 32 4512.0 33 5985.0 34 8952.0 35 10883.0 36 13777.0 37 16394.0 38 26477.0 39 22601.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.236780327484006 4.753066494512589 37.194817770995954 30.815335407007456 2 35.14584189212982 10.296965784377017 36.408386642408594 18.14880568108457 3 17.194377604319502 10.470831621574037 54.29309231762427 18.041698456482187 4 14.823346440518808 5.10373261341628 59.60370326897119 20.469217677093727 5 17.016843711485414 5.94371735430483 54.98928927753977 22.050149656669994 6 16.29423675098304 11.227918305064852 58.727771582839374 13.750073361112742 7 56.975908210575746 3.076765068372557 33.478343799518754 6.4689829215329535 8 54.1162920359176 7.735195727448795 29.70758260461295 8.440929632020659 9 49.181289981806444 6.009742355772053 32.151974881155 12.656992781266506 10 29.22633370502964 17.647015669933683 37.35914666353659 15.767503961500088 11 22.192470215388227 16.967691765948707 39.906978109043955 20.932859909619108 12 18.22803568284524 14.27387170608604 46.001819355595984 21.49627325547274 13 21.858677152415048 16.182727859616175 47.71406772697928 14.244527260989495 14 16.427753976172312 20.40906156464581 45.29168378425964 17.871500674922235 15 11.833881096308469 17.357972885732732 49.67721110393802 21.130934914020777 16 13.08395445742121 18.553759023416866 42.94412817653618 25.41815834262574 17 13.111831680262926 19.877193497270966 42.86563178590293 24.14534303656318 18 14.262867539174835 17.113680380304007 45.88664240859205 22.7368096719291 19 13.758876694641705 20.022448500498854 45.16110100358002 21.057573801279418 20 14.76612477258055 23.894448030987732 44.461969599154884 16.877457597276834 21 14.017841422618698 25.738746405305474 43.715153471447856 16.52825870062797 22 11.205176360115031 21.93277187628382 43.22730207171782 23.63474969188333 23 12.849932507776277 23.757262750161395 40.37575561946124 23.01704912260109 24 14.69423088209402 23.141029403133988 38.39500557544457 23.769734139327426 25 13.338517518633722 26.566259757027993 36.00269968894888 24.0925230353894 26 12.882211397382475 22.645108281002408 41.36906508597922 23.103615235635893 27 17.290480662010683 21.70095076002113 40.347144785492105 20.661423792476082 28 11.704765537883679 21.653266036739247 40.762368683608194 25.87959974176888 29 15.231967838488176 20.475820177240447 40.49093256646517 23.80127941780621 30 21.64226186982804 21.640794647573212 36.63433886965197 20.08260461294677 31 19.93734960971888 24.36762720816949 31.679529315100652 24.015493867010974 32 18.616849580374435 27.10619754680439 31.504929866776223 22.772023006044957 33 21.262984916955222 20.00704266682317 31.087505135277894 27.642467280943716 34 20.28801572862257 19.858119607958212 34.065966312577025 25.787898350842188 35 19.52726098949469 22.894536064323024 33.69989435999765 23.878308586184634 36 22.69719467104877 21.61511825811374 34.22369270497095 21.463994365866544 37 22.110305769117904 23.96707553260168 31.46017958800399 22.462439110276424 38 17.79153706203416 27.084922824109398 28.17140090380891 26.952139210047537 39 21.101590468924233 23.325165796114796 30.52335817829685 25.049885556664126 40 24.283995539644344 20.720846293796587 31.538675978637244 23.456482187921825 41 21.900492986677623 24.421180820470685 30.926844298374316 22.751481894477376 42 19.579347379541055 23.244468572099304 37.28578555079524 19.89039849756441 43 19.88819766418217 19.194201537648922 38.922471976054936 21.995128822113973 44 20.139092669757616 18.889019308644876 34.393156875403484 26.578731146194023 45 22.28710605082458 17.292681495392923 31.736017371911494 28.684195081871 46 24.192294148717647 20.358442396854276 34.43497270966606 21.014290744762015 47 16.30230647338459 23.274546628323257 40.20188978226422 20.221257116027935 48 17.432067609601503 22.768354950407886 37.34300721873349 22.456570221257117 49 21.106725746816128 17.647015669933683 40.04196255648806 21.204296026762133 50 20.929925465109456 15.867275074828335 35.96308468806855 27.23971477199366 51 18.36962263043606 16.170256470450145 33.12107518046834 32.33904571864546 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 451.0 1 735.0 2 1019.0 3 5094.0 4 9169.0 5 5648.0 6 2127.0 7 2060.5 8 1994.0 9 1971.0 10 1948.0 11 1827.0 12 1706.0 13 1593.0 14 1480.0 15 1378.0 16 1276.0 17 1184.5 18 1093.0 19 1014.0 20 935.0 21 866.5 22 798.0 23 767.5 24 737.0 25 729.0 26 743.5 27 766.0 28 776.5 29 787.0 30 862.0 31 937.0 32 1003.5 33 1070.0 34 1226.5 35 1383.0 36 1469.0 37 1555.0 38 1786.0 39 2017.0 40 2788.5 41 3560.0 42 4686.0 43 5812.0 44 6480.5 45 7149.0 46 11620.5 47 16092.0 48 16993.5 49 17895.0 50 17614.5 51 17334.0 52 14023.5 53 10713.0 54 8666.0 55 6619.0 56 5515.5 57 4412.0 58 3800.5 59 3189.0 60 2852.5 61 2516.0 62 2191.5 63 1867.0 64 1734.0 65 1601.0 66 1385.0 67 1169.0 68 979.0 69 789.0 70 693.0 71 597.0 72 494.0 73 391.0 74 335.5 75 231.0 76 182.0 77 137.0 78 92.0 79 69.5 80 47.0 81 34.0 82 21.0 83 13.0 84 5.0 85 6.5 86 8.0 87 4.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 136312.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.791859850930216 #Duplication Level Percentage of deduplicated Percentage of total 1 79.91084929849707 44.583749046305535 2 11.354222824157473 12.669464170432537 3 4.099880343453735 6.862198485826633 4 1.7843289371605897 3.9820411996009155 5 0.9033411789457074 2.5199542226656493 6 0.4391789720056278 1.4701566993368156 7 0.28401993399166353 1.109220024649334 8 0.2038106007810548 0.9096777979928399 9 0.13280561728313894 0.6668525148189447 >10 0.7797399113752613 7.7645401725453365 >50 0.061800633785223075 2.367363108163625 >100 0.03287267754533142 3.6093667468748167 >500 0.007889442610879541 3.840454252010095 >1k 0.003944721305439771 2.976260343916896 >5k 0.001314907101813257 4.668701214860027 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6364 4.668701214860027 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCC 1706 1.2515405833675686 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC 1197 0.8781325195140559 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG 1154 0.8465872410352719 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTC 997 0.7314102940313398 No Hit CCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 982 0.7204061271201361 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC 938 0.6881272375139387 No Hit CTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGCT 871 0.6389752919772287 No Hit GCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 786 0.5766183461470744 No Hit TCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 661 0.48491695522037676 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCACGATT 405 0.29711250660250016 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG 341 0.250161394448031 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 325 0.23842361640941367 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCT 304 0.2230177827337285 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTC 299 0.2193497270966606 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTA 295 0.2164152825870063 No Hit TCCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 258 0.1892716708727038 No Hit GAACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCT 249 0.18266917072598157 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 245 0.17973472621632725 No Hit CGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 235 0.17239861494219144 No Hit GCCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 168 0.12324666940548154 No Hit TTCCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCT 168 0.12324666940548154 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTC 151 0.11077528023945069 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 149 0.10930805798462351 No Hit TGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 141 0.10343916896531485 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7108691824637596 0.0 2 0.0 0.0 0.0 2.723898116086625 0.0 3 0.0 0.0 0.0 3.7568225834849462 0.0 4 0.0 0.0 0.0 5.174892892775397 0.0 5 0.0 0.0 0.0 8.472474910499443 0.0 6 0.0 0.0 0.0 10.333646340747697 0.0 7 0.0 0.0 0.0 12.249104994424556 0.0 8 0.0 0.0 0.0 14.89524033100534 0.0 9 0.0 0.0 0.0 16.186395915253243 0.0 10 0.0 0.0 0.0 19.765684605904102 0.0 11 0.0 0.0 0.0 25.582487235166383 0.0 12 7.336111274135806E-4 0.0 0.0 31.130788191795293 0.0 13 7.336111274135806E-4 0.0 0.0 32.82542989612067 0.0 14 7.336111274135806E-4 0.0 0.0 33.65514408122542 0.0 15 7.336111274135806E-4 0.0 0.0 34.81278244028405 0.0 16 7.336111274135806E-4 0.0 0.0 36.79940137332003 0.0 17 7.336111274135806E-4 0.0 0.0 39.05745642349903 0.0 18 7.336111274135806E-4 0.0 0.0 41.077087857268616 0.0 19 7.336111274135806E-4 0.0 0.0 42.620605669346794 0.0 20 7.336111274135806E-4 0.0 0.0 43.72469041610423 0.0 21 7.336111274135806E-4 0.0 0.0 44.94175127648336 0.0 22 7.336111274135806E-4 0.0 0.0 45.904982686777394 0.0 23 7.336111274135806E-4 0.0 0.0 46.624655202770114 0.0 24 7.336111274135806E-4 0.0 0.0 47.020805211573446 0.0 25 7.336111274135806E-4 0.0 0.0 47.3259874405775 0.0 26 7.336111274135806E-4 0.0 0.0 47.56587827924174 0.0 27 7.336111274135806E-4 0.0 0.0 47.82044134045425 0.0 28 7.336111274135806E-4 0.0 0.0 48.01118023358178 0.0 29 7.336111274135806E-4 0.0 0.0 48.20705440460121 0.0 30 7.336111274135806E-4 0.0 0.0 48.405129409002875 0.0 31 7.336111274135806E-4 0.0 0.0 48.56725746816128 0.0 32 7.336111274135806E-4 0.0 0.0 48.74405774986795 0.0 33 7.336111274135806E-4 0.0 0.0 48.89224719760549 0.0 34 7.336111274135806E-4 0.0 0.0 49.07271553494923 0.0 35 7.336111274135806E-4 0.0 0.0 49.26345442807676 0.0 36 7.336111274135806E-4 0.0 0.0 49.394770819883796 0.0 37 7.336111274135806E-4 0.0 0.0 49.540025823111684 0.0 38 7.336111274135806E-4 0.0 0.0 49.72269499383766 0.0 39 7.336111274135806E-4 0.0 0.0 50.06309055695757 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGTA 20 7.011398E-4 45.000004 5 CATGGGA 20 7.011398E-4 45.000004 4 TGGGTCC 20 7.011398E-4 45.000004 6 GGTCCAG 20 7.011398E-4 45.000004 8 GCACGGG 20 7.011398E-4 45.000004 3 TGTATTG 20 7.011398E-4 45.000004 1 GGTCAAG 40 6.7393557E-9 45.000004 15 ACGGGCT 20 7.011398E-4 45.000004 5 CTGAATG 20 7.011398E-4 45.000004 5 TGCATGG 20 7.011398E-4 45.000004 2 TACTGAT 20 7.011398E-4 45.000004 20 GCCCTAC 20 7.011398E-4 45.000004 26 GCGGGAT 20 7.011398E-4 45.000004 5 GTCAAGC 35 1.2014243E-7 45.000004 16 ACATGGG 20 7.011398E-4 45.000004 3 CTGGGTC 35 1.2014243E-7 45.000004 5 CTGGGTA 45 3.8016879E-10 45.000004 5 GTTGGGT 20 7.011398E-4 45.000004 4 TGGTCAA 35 1.2014243E-7 45.000004 14 TTGGGTC 40 6.7393557E-9 45.000004 5 >>END_MODULE