##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933625.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 237857 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.700677297704082 33.0 31.0 34.0 30.0 34.0 2 31.89539092816272 33.0 31.0 34.0 30.0 34.0 3 32.054305738321766 33.0 31.0 34.0 30.0 34.0 4 35.651656247240986 37.0 35.0 37.0 33.0 37.0 5 35.728126563439375 37.0 35.0 37.0 35.0 37.0 6 35.70407850094805 37.0 35.0 37.0 35.0 37.0 7 35.668216617547515 37.0 35.0 37.0 35.0 37.0 8 35.45432339599003 37.0 35.0 37.0 33.0 37.0 9 37.274442206872195 39.0 37.0 39.0 34.0 39.0 10 36.85120051123154 39.0 37.0 39.0 32.0 39.0 11 36.883047377205635 39.0 37.0 39.0 33.0 39.0 12 36.939665429228484 39.0 37.0 39.0 33.0 39.0 13 36.92072127370647 39.0 37.0 39.0 33.0 39.0 14 37.903517659770365 39.0 37.0 41.0 33.0 41.0 15 37.89004317720311 39.0 37.0 41.0 33.0 41.0 16 38.076255901655195 40.0 37.0 41.0 33.0 41.0 17 38.11361027844461 40.0 37.0 41.0 33.0 41.0 18 38.041234859600515 39.0 37.0 40.0 34.0 41.0 19 37.866625745721166 39.0 37.0 40.0 34.0 41.0 20 37.46715043072098 39.0 35.0 40.0 33.0 41.0 21 37.379778606473636 39.0 35.0 40.0 33.0 41.0 22 37.387884317047636 39.0 35.0 40.0 33.0 41.0 23 37.2972079863111 39.0 35.0 40.0 33.0 41.0 24 37.23022656470064 39.0 35.0 40.0 33.0 41.0 25 37.14523011725532 39.0 35.0 40.0 33.0 41.0 26 37.1511622529503 39.0 35.0 40.0 33.0 41.0 27 37.0592835190892 39.0 35.0 40.0 33.0 41.0 28 37.068448689758974 39.0 35.0 40.0 33.0 41.0 29 36.96875433558819 39.0 35.0 40.0 32.0 41.0 30 36.74010014420429 39.0 35.0 40.0 31.0 41.0 31 36.43451317388178 38.0 35.0 40.0 31.0 41.0 32 36.20059111146613 38.0 35.0 40.0 30.0 41.0 33 35.80043891918253 38.0 35.0 40.0 29.0 41.0 34 35.58955590964319 38.0 35.0 40.0 27.0 41.0 35 35.43036782604674 38.0 35.0 40.0 25.0 41.0 36 35.168891392727566 38.0 35.0 40.0 24.0 41.0 37 34.939211374901724 38.0 35.0 40.0 23.0 41.0 38 34.8062827665362 38.0 34.0 40.0 23.0 41.0 39 34.86997229427765 38.0 34.0 40.0 23.0 41.0 40 34.76353018830642 38.0 34.0 40.0 22.0 41.0 41 34.65573012356164 38.0 34.0 40.0 22.0 41.0 42 34.370117339409816 38.0 34.0 40.0 21.0 41.0 43 34.207557482016504 38.0 33.0 40.0 20.0 41.0 44 34.14240909454 38.0 33.0 40.0 20.0 41.0 45 34.1122144818105 38.0 33.0 40.0 20.0 41.0 46 33.74562867605326 37.0 33.0 40.0 20.0 41.0 47 33.56390184018129 37.0 32.0 40.0 20.0 41.0 48 33.50411381628457 37.0 32.0 40.0 19.0 41.0 49 33.58841656961956 37.0 33.0 40.0 20.0 41.0 50 33.399899939879845 36.0 32.0 40.0 18.0 41.0 51 32.393509545651376 35.0 31.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 7.0 11 1.0 12 7.0 13 18.0 14 11.0 15 13.0 16 23.0 17 29.0 18 80.0 19 140.0 20 268.0 21 414.0 22 590.0 23 993.0 24 1697.0 25 2855.0 26 4440.0 27 5198.0 28 5277.0 29 5215.0 30 5635.0 31 6216.0 32 8017.0 33 9986.0 34 14330.0 35 18600.0 36 24670.0 37 33420.0 38 53280.0 39 36416.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.99719158990486 5.584027377794221 42.65251810962049 27.766262922680436 2 31.91161075772418 6.079282930500258 40.934679240047586 21.07442707172797 3 20.375267492653148 6.506850754865318 51.88579692840657 21.23208482407497 4 16.709619645417202 6.398802641923508 52.46303451233304 24.428543200326246 5 14.424633288068042 6.71916319469261 53.06633817798089 25.789865339258462 6 17.70559621957731 8.336521523436351 58.708804029311736 15.249078227674612 7 65.61757694749366 3.2860079795843724 24.503378080106955 6.59303699281501 8 62.88021794607685 4.272314878267195 24.180074582627377 8.667392593028584 9 56.77739145789277 6.05573937281644 27.86380051879911 9.303068650491682 10 29.36133895575913 20.062054091323777 33.024464278957524 17.552142673959565 11 18.59310426012268 17.736707349373784 38.08759044299727 25.582597947506276 12 16.153823515809922 14.710939766330188 45.40585309660847 23.729383621251422 13 20.73430674733138 16.378328155152044 46.97360178594702 15.913763311569557 14 18.506918022172986 18.16974064248687 44.932459418894545 18.390881916445593 15 12.698806425709567 17.281391760595653 46.976544730657494 23.04325708303729 16 11.937845007714719 17.523133647527718 43.690116330400194 26.848905014357367 17 11.590997952551323 18.239530474192478 41.97353872284608 28.19593285041012 18 13.255863817335625 16.088658311506492 45.75816562051989 24.897312250637988 19 13.040188012124931 19.761873730855093 46.59522318031422 20.602715076705753 20 13.637605788351825 23.817251541892816 43.14609197963482 19.399050690120532 21 12.66685445456724 25.646501889790922 43.204530453171444 18.482113202470394 22 10.446612880848576 23.000374174398903 40.43942368734155 26.113589257410965 23 11.174781486355247 23.819774065930368 37.96356634448429 27.041878103230093 24 13.024632447226695 22.708602227388724 37.705007630635215 26.561757694749367 25 12.799707387211646 25.38836359661477 34.321041634259245 27.49088738191434 26 12.629857435349813 26.181276985751943 36.94698915735085 24.2418764215474 27 14.493161857754869 26.341877682809418 38.20152444536003 20.963436014075683 28 11.83694404621264 24.076651097087744 38.00897177716023 26.077433079539386 29 15.331480679567978 22.08890215549679 35.54152284776147 27.038094317173766 30 21.160613309677665 24.46680148156245 32.31647586575127 22.056109343008615 31 18.881092421076527 31.98728647885074 25.684760171027133 23.446860929045606 32 16.40733718158389 32.024283498068165 24.47058526761878 27.097794052729164 33 17.643794380657283 27.391668103103967 24.497492190686003 30.46704532555275 34 18.85965096675734 23.398512551659188 26.078694341558162 31.663142140025307 35 21.655448441710774 24.368423044097927 23.20133525605721 30.774793258134086 36 21.237550292823 32.56452406277722 22.52277628995573 23.675149354444056 37 15.83052001833034 37.81011279886655 23.527581698247264 22.831785484555848 38 14.403612254421775 37.11515742652098 22.733827467764243 25.747402851293007 39 17.876707433457916 27.67503163665564 23.133647527716235 31.31461340217021 40 19.858990906300843 19.513405113156225 24.604279041609033 36.0233249389339 41 17.082112361629047 23.435929991549546 21.978751939190357 37.503205707631054 42 18.777668935536898 30.144582669419023 24.21833286386358 26.859415531180495 43 17.605956520094008 30.15635444826093 30.371609832798697 21.866079198846368 44 17.738389032065484 25.01503003905708 28.467945025792808 28.778635903084627 45 21.93292608584149 19.14007155559853 26.255691444859725 32.671310913700246 46 23.48511921028181 19.30613772140404 29.947405373817045 27.26133769449711 47 14.962771749412463 25.720495928225784 33.70638661044241 25.610345711919347 48 14.528056773607673 25.047822851545256 34.52410481928217 25.9000155555649 49 20.952505076579627 18.715026255271024 35.74248392941978 24.589984738729573 50 20.885237768911573 14.26277132899179 32.80206174298003 32.049929159116616 51 17.72913977726113 13.493401497538438 29.636714496525222 39.14074422867521 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 525.0 1 892.0 2 1259.0 3 6349.5 4 11440.0 5 7183.5 6 2927.0 7 2629.0 8 2331.0 9 2313.5 10 2296.0 11 2169.0 12 2042.0 13 1900.5 14 1759.0 15 1677.5 16 1596.0 17 1449.5 18 1303.0 19 1223.5 20 1144.0 21 1044.0 22 944.0 23 894.5 24 845.0 25 863.0 26 923.5 27 966.0 28 1010.0 29 1054.0 30 1116.0 31 1178.0 32 1356.5 33 1535.0 34 1701.5 35 1868.0 36 2246.5 37 2625.0 38 2962.5 39 3300.0 40 4480.5 41 5661.0 42 7407.5 43 9154.0 44 11595.5 45 14037.0 46 19916.5 47 25796.0 48 32641.0 49 39486.0 50 39414.5 51 39343.0 52 32226.5 53 25110.0 54 18632.0 55 12154.0 56 9150.5 57 6147.0 58 5040.0 59 3933.0 60 3608.0 61 3283.0 62 2968.0 63 2653.0 64 2445.5 65 2238.0 66 1932.5 67 1627.0 68 1388.0 69 1149.0 70 942.0 71 735.0 72 663.5 73 592.0 74 500.5 75 350.0 76 291.0 77 215.0 78 139.0 79 100.0 80 61.0 81 40.5 82 20.0 83 15.0 84 10.0 85 6.5 86 3.0 87 2.5 88 2.0 89 3.0 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 237857.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.616480505199306 #Duplication Level Percentage of deduplicated Percentage of total 1 70.54406121236406 32.17971793051391 2 14.113333088781566 12.876011674155771 3 6.218952997028236 8.51060244455068 4 3.082830436661653 5.625114980592454 5 1.6979599793116786 3.8727479147439903 6 0.9865508084531202 2.7001785432714223 7 0.6344715272191026 2.0259650636745956 8 0.4753530237513948 1.7347145552834435 9 0.3361278348378586 1.3799671942622425 >10 1.7194226303260525 14.012423885289685 >50 0.12231867049805854 3.7733607813413976 >100 0.061656565616907556 4.7967680814984295 >500 9.944607357565735E-4 0.29168922606426045 >1k 0.0049723036787828676 2.9459250918527333 >5k 9.944607357565735E-4 3.2748126329049714 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7219 3.0350168378479503 No Hit CTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGCT 1602 0.6735139180263772 No Hit CCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 1499 0.6302105887150683 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCC 1236 0.5196399517357068 No Hit TCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 1085 0.456156430123982 No Hit GCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 1072 0.45069096137595277 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGC 643 0.2703304926909866 No Hit TCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG 455 0.19129140618102475 No Hit CGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG 352 0.14798807686971585 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGC 334 0.14042050475705992 No Hit GCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG 325 0.13663671870073196 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 306 0.1286487259151507 No Hit TTCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCT 304 0.12780788456930003 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 302 0.12696704322344937 No Hit TGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG 300 0.12612620187759874 No Hit GAATCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTC 286 0.12024031245664413 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCG 279 0.11729736774616681 No Hit GTGCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTC 262 0.11015021630643622 No Hit GGCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCT 250 0.10510516823133227 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.204206729253291E-4 0.0 0.0 0.7327932329088486 0.0 2 4.204206729253291E-4 0.0 0.0 2.423725179414522 0.0 3 4.204206729253291E-4 0.0 0.0 3.413815864153672 0.0 4 4.204206729253291E-4 0.0 0.0 4.773876741067112 0.0 5 4.204206729253291E-4 0.0 0.0 7.843788494767865 0.0 6 4.204206729253291E-4 0.0 0.0 10.386492724620256 0.0 7 4.204206729253291E-4 0.0 0.0 12.67231992331527 0.0 8 8.408413458506582E-4 0.0 0.0 16.099589249002552 0.0 9 8.408413458506582E-4 0.0 0.0 17.71904968111092 0.0 10 8.408413458506582E-4 0.0 0.0 21.123616290460234 0.0 11 8.408413458506582E-4 0.0 0.0 29.157014508717424 0.0 12 8.408413458506582E-4 0.0 0.0 36.58458653728921 0.0 13 8.408413458506582E-4 0.0 0.0 39.132335815216706 0.0 14 8.408413458506582E-4 0.0 0.0 40.06987391584019 0.0 15 8.408413458506582E-4 0.0 0.0 41.350054864897814 0.0 16 8.408413458506582E-4 0.0 0.0 44.30687345758166 0.0 17 8.408413458506582E-4 0.0 0.0 47.86279150918409 0.0 18 0.0012612620187759872 0.0 0.0 51.16057126761037 0.0 19 0.0012612620187759872 0.0 0.0 53.05120303375558 0.0 20 0.0012612620187759872 0.0 0.0 54.65258537692815 0.0 21 0.0016816826917013163 0.0 0.0 56.38303686668881 0.0 22 0.0016816826917013163 0.0 0.0 57.81541009934541 0.0 23 0.0016816826917013163 0.0 0.0 58.91985520712024 0.0 24 0.0016816826917013163 0.0 0.0 59.52357929344102 0.0 25 0.0016816826917013163 0.0 0.0 59.90153747840089 0.0 26 0.0016816826917013163 0.0 0.0 60.16387997830629 0.0 27 0.0016816826917013163 0.0 0.0 60.41739364408026 0.0 28 0.0016816826917013163 0.0 0.0 60.62676313919708 0.0 29 0.0016816826917013163 0.0 0.0 60.828565062201235 0.0 30 0.0016816826917013163 0.0 0.0 61.01691352367179 0.0 31 0.0016816826917013163 0.0 0.0 61.192228944281645 0.0 32 0.0016816826917013163 0.0 0.0 61.33433113173041 0.0 33 0.0016816826917013163 0.0 0.0 61.488205098021076 0.0 34 0.0016816826917013163 0.0 0.0 61.63240938883447 0.0 35 0.0016816826917013163 0.0 0.0 61.77198905224568 0.0 36 0.0016816826917013163 0.0 0.0 61.918715867096616 0.0 37 0.0016816826917013163 0.0 0.0 62.055773006470275 0.0 38 0.0016816826917013163 0.0 0.0 62.19997729728366 0.0 39 0.0016816826917013163 0.0 0.0 62.36015757366821 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTCT 20 7.0219947E-4 45.000004 33 GATCCTA 20 7.0219947E-4 45.000004 1 GGGTACC 35 1.2064993E-7 45.000004 7 GGCCGAT 20 7.0219947E-4 45.000004 8 TTCGTTG 35 1.2064993E-7 45.000004 1 TAACGTC 20 7.0219947E-4 45.000004 32 TTCCGAT 20 7.0219947E-4 45.000004 13 GCGTTTG 30 2.15822E-6 45.000004 1 TACGGGA 20 7.0219947E-4 45.000004 4 TGTTCGG 30 2.15822E-6 45.000004 2 CTTTGCG 40 6.7757355E-9 45.000004 1 ATTGGGT 20 7.0219947E-4 45.000004 4 ATTGGGC 40 6.7757355E-9 45.000004 4 CGTCGGG 20 7.0219947E-4 45.000004 3 TTACGGG 30 2.15822E-6 45.000004 3 ATAACGT 20 7.0219947E-4 45.000004 31 TGGGCGC 35 1.2064993E-7 45.000004 6 GTTTGCG 25 3.88145E-5 45.0 1 TTGCTCG 25 3.88145E-5 45.0 1 TACGAAT 25 3.88145E-5 45.0 12 >>END_MODULE