SRR2933624.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933624.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	104021
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7002	6.731333096201729	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCC	697	0.6700570077195951	No Hit
CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	513	0.4931696484363734	No Hit
CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT	470	0.4518318416473596	No Hit
TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	415	0.39895790273117926	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGC	387	0.3720402611011238	No Hit
GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	332	0.3191663221849434	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCG	149	0.14324030724565232	No Hit
TCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	147	0.1413176185577912	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	134	0.12882014208669404	No Hit
GCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	129	0.12401342036704127	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	126	0.12112938733524962	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	118	0.11343863258380518	No Hit
GGCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCT	118	0.11343863258380518	No Hit
TTCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCT	107	0.10286384480056912	No Hit
CGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	106	0.10190250045663857	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGAGACA	30	2.1464439E-6	45.000004	8
GGCCGAT	35	1.1977318E-7	45.000004	8
GGGAGAC	35	1.1977318E-7	45.000004	7
GCATGGG	30	2.1464439E-6	45.000004	3
GTGCTTG	35	1.1977318E-7	45.000004	1
GGGCCGA	35	1.1977318E-7	45.000004	7
CTCTGCG	20	7.003698E-4	45.0	1
TTGCATG	20	7.003698E-4	45.0	1
AGCTTGG	20	7.003698E-4	45.0	2
CTGGGTG	25	3.8663013E-5	45.0	5
GGACCGA	20	7.003698E-4	45.0	8
TATGTGG	20	7.003698E-4	45.0	2
AGGGCGA	20	7.003698E-4	45.0	6
AACCCGG	25	3.8663013E-5	45.0	39
AGGGATG	40	6.712071E-9	45.0	6
AGGGAAT	20	7.003698E-4	45.0	6
CGGCGTT	25	3.8663013E-5	45.0	43
TAACCCG	25	3.8663013E-5	45.0	38
GACCGAT	20	7.003698E-4	45.0	9
TCTTGGA	25	3.8663013E-5	45.0	3