SRR2933623.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933623.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	104917
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6881	6.558517685408466	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCC	741	0.7062725773706835	No Hit
CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	549	0.5232707759467007	No Hit
CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT	535	0.5099268945928687	No Hit
TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	413	0.3936444999380463	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGC	404	0.3850662904962971	No Hit
GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	314	0.29928419607880513	No Hit
TCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	151	0.14392329174490312	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	137	0.13057941039107104	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCG	130	0.12390746971415499	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	122	0.11628239465482237	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	117	0.11151672274273951	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	116	0.11056358836032291	No Hit
TTCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCT	113	0.1077041852130732	No Hit
CGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	108	0.10293851330099031	No Hit
GGGCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTC	105	0.10007911015374056	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGGAC	20	7.0039765E-4	45.000004	5
AGCTCGC	30	2.1466221E-6	45.000004	19
AATTCTA	30	2.1466221E-6	45.000004	34
CTGGGTA	30	2.1466221E-6	45.000004	5
GTGTAGG	20	7.0039765E-4	45.000004	2
TGTTCGG	20	7.0039765E-4	45.000004	2
CTGATGC	20	7.0039765E-4	45.000004	11
CGGGCTT	20	7.0039765E-4	45.000004	6
ATGGAAG	30	2.1466221E-6	45.000004	40
AGCAGGG	20	7.0039765E-4	45.000004	3
CTTGTTG	30	2.1466221E-6	45.000004	1
TGAGGGC	20	7.0039765E-4	45.000004	4
TGGGCTA	20	7.0039765E-4	45.000004	6
TGGGCGC	20	7.0039765E-4	45.000004	6
TGGGTGA	20	7.0039765E-4	45.000004	6
GGGGTAT	20	7.0039765E-4	45.000004	7
GGGCGCG	20	7.0039765E-4	45.000004	7
ATTCTAT	30	2.1466221E-6	45.000004	35
TGGGAGT	35	1.1978591E-7	45.000004	6
TGGGAGG	70	0.0	45.000004	6