##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933621.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 490641 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05626720962985 33.0 31.0 34.0 30.0 34.0 2 32.23518621558329 34.0 31.0 34.0 30.0 34.0 3 32.40520258192854 34.0 31.0 34.0 30.0 34.0 4 35.885455964748154 37.0 35.0 37.0 35.0 37.0 5 35.95328559985815 37.0 35.0 37.0 35.0 37.0 6 35.92749484857564 37.0 35.0 37.0 35.0 37.0 7 35.92002910478333 37.0 35.0 37.0 35.0 37.0 8 35.79759131421956 37.0 35.0 37.0 35.0 37.0 9 37.628060027596554 39.0 38.0 39.0 35.0 39.0 10 37.16673902099498 39.0 37.0 39.0 34.0 39.0 11 37.13517826679792 39.0 37.0 39.0 34.0 39.0 12 37.02038965353486 39.0 37.0 39.0 33.0 39.0 13 36.95589850827795 39.0 37.0 39.0 33.0 39.0 14 37.965314761709685 40.0 37.0 41.0 33.0 41.0 15 38.063072592791876 40.0 37.0 41.0 33.0 41.0 16 38.22297362022334 40.0 37.0 41.0 33.0 41.0 17 38.21963920667046 40.0 37.0 41.0 33.0 41.0 18 38.1284034558873 39.0 37.0 41.0 34.0 41.0 19 37.986607315735945 39.0 37.0 41.0 34.0 41.0 20 37.666240693297134 39.0 35.0 41.0 33.0 41.0 21 37.58626979808047 39.0 35.0 41.0 33.0 41.0 22 37.6010402718077 39.0 35.0 41.0 33.0 41.0 23 37.49013637262275 39.0 35.0 41.0 33.0 41.0 24 37.41352434876009 39.0 35.0 41.0 33.0 41.0 25 37.323523716933565 39.0 35.0 41.0 33.0 41.0 26 37.285773100902695 39.0 35.0 41.0 33.0 41.0 27 37.21017607578657 39.0 35.0 41.0 33.0 41.0 28 37.12665064680693 39.0 35.0 41.0 33.0 41.0 29 36.97640433636814 39.0 35.0 41.0 32.0 41.0 30 36.79186411245697 39.0 35.0 41.0 32.0 41.0 31 36.552312179373516 39.0 35.0 40.0 31.0 41.0 32 36.359570439486305 39.0 35.0 40.0 31.0 41.0 33 36.06005001620329 39.0 35.0 41.0 30.0 41.0 34 35.81054375806343 39.0 35.0 41.0 28.0 41.0 35 35.62972723437299 39.0 35.0 41.0 27.0 41.0 36 35.44052372304801 38.0 35.0 40.0 25.0 41.0 37 35.28313573468177 38.0 35.0 40.0 25.0 41.0 38 35.17807928811494 38.0 35.0 40.0 25.0 41.0 39 35.20935470129891 38.0 35.0 40.0 25.0 41.0 40 35.12170405653013 38.0 35.0 40.0 24.0 41.0 41 34.96731826325154 38.0 35.0 40.0 23.0 41.0 42 34.657635623602594 38.0 34.0 40.0 23.0 41.0 43 34.54448364486458 38.0 34.0 40.0 23.0 41.0 44 34.47401256723347 38.0 34.0 40.0 22.0 41.0 45 34.52000546224225 38.0 34.0 40.0 23.0 41.0 46 34.35994342095341 37.0 34.0 40.0 22.0 41.0 47 34.28929706241427 37.0 34.0 40.0 22.0 41.0 48 34.161411296650705 37.0 33.0 40.0 22.0 41.0 49 34.16472532870266 37.0 34.0 40.0 22.0 41.0 50 34.01696352322778 37.0 33.0 40.0 21.0 41.0 51 33.094743407093986 35.0 32.0 39.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 8.0 10 10.0 11 8.0 12 17.0 13 16.0 14 22.0 15 32.0 16 56.0 17 63.0 18 168.0 19 269.0 20 481.0 21 791.0 22 1311.0 23 1990.0 24 3277.0 25 5615.0 26 8231.0 27 9395.0 28 9479.0 29 9445.0 30 10187.0 31 11633.0 32 14567.0 33 20124.0 34 32976.0 35 36647.0 36 45543.0 37 62074.0 38 102847.0 39 103321.0 40 37.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.284140542677843 5.626720962985156 39.03791162988825 26.05122686444875 2 32.33932753275817 5.193206438108515 44.97932296730196 17.48814306183136 3 22.98625675391987 5.247625045603608 52.50295022226027 19.263167978216252 4 17.974038044109644 5.7728563246854625 53.281727372967204 22.971378258237692 5 16.495767781330954 6.784186401054947 53.111745655173536 23.608300162440564 6 20.28040868985674 7.728461339349953 56.49140614013098 15.499723830662337 7 73.67015801777674 3.133451953668772 18.468697071789762 4.727692956764722 8 73.46328578329165 3.5325217419661223 17.68380547080248 5.320387003939745 9 67.51249895544808 5.740042108180931 20.403920585519757 6.343538350851233 10 34.182630477273605 22.506883851940625 26.838156615529478 16.47232905525629 11 26.341051807737227 20.72024148002307 32.312627766533986 20.62607894570572 12 22.48466801592203 19.44537859657061 37.57778090294126 20.492172484566108 13 23.78174673539309 19.291090634496506 39.73312462676377 17.19403800334664 14 20.281427764903462 20.44162636224857 40.777268919637784 18.49967695321019 15 18.274257552874708 19.257868787973283 41.59599381217632 20.87187984697569 16 20.175647775053452 19.532407605560888 38.465191453629025 21.82675316575663 17 19.952470339820767 19.766794866307542 37.340744047073116 22.939990746798575 18 21.35084511893625 18.168885193043387 38.81188078452473 21.668388903495632 19 20.758354886770572 21.734424966523385 37.5099105048294 19.997309641876647 20 21.39221956583327 24.88581264101451 35.16563026734415 18.556337525808075 21 20.55107502226679 25.207228910751446 36.02736012685446 18.214335940127302 22 18.84820061919 22.362175195305735 36.00208706569569 22.787537119808576 23 18.009705670745007 24.001255500457564 35.062296057606275 22.926742771191154 24 18.47949926728504 24.238699986344393 34.9970752546159 22.284725491754664 25 19.675485742121023 25.715339729048324 31.872591161358304 22.736583367472345 26 18.487244237640148 25.17176509912543 33.366555179856555 22.974435483377867 27 19.105415160983284 23.554900629992193 35.26020043168019 22.07948377734433 28 17.15388644650569 24.50447475853017 34.34364433465609 23.997994460308046 29 19.185106829637146 24.360785176942002 32.99275845271797 23.461349540702876 30 24.35732032178314 23.35251232571269 32.524391561243355 19.765775791260822 31 23.579358431113583 27.208488487509197 28.92664901628686 20.28550406509036 32 22.310406182932123 26.765394657193347 28.788666254960347 22.135532904914186 33 25.11286256142475 23.67127900032814 28.52594870791475 22.68990973033236 34 23.703074141785947 24.846680159220284 29.675669175629434 21.774576523364335 35 23.66027298982352 27.000800992986722 28.810474460960258 20.528451556229506 36 27.26698339519119 28.196176022794674 26.938433600127183 17.59840698188696 37 25.521307840151962 28.002551763917 28.190265387523667 18.285875008407366 38 24.633693474454844 26.075480850560794 30.52353961450429 18.767286060480064 39 26.47679260396094 22.438198193791386 30.039478967310114 21.045530234937562 40 30.346424371383556 22.484871830931375 28.52146477770916 18.64723901997591 41 27.428404882592368 23.784803960533264 27.860696517412936 20.92609463946144 42 25.355402422545204 24.33755026587668 31.40361282485565 18.90343448672247 43 22.35626456003473 22.63977123803351 34.75127435334593 20.25268984858583 44 23.46481439586174 23.17478563756392 31.26848347365997 22.091916492914372 45 25.613228409366524 21.642504397308826 28.965373868062393 23.77889332526226 46 26.371827874148305 22.433510448576456 30.335825990897618 20.858835686377617 47 22.49017102117434 25.319938610919184 32.970542616699376 19.219347751207096 48 21.996734883550296 24.626152319109085 33.74626254226614 19.630850255074485 49 24.61514630860446 21.624568676486476 32.974211286867586 20.78607372804148 50 23.04964322182614 21.055924800414154 31.533850615827053 24.360581361932656 51 22.02893765502679 20.328305217052794 30.19988137966456 27.44287574825585 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 659.0 1 1301.0 2 1943.0 3 9901.0 4 17859.0 5 11287.0 6 4715.0 7 4555.0 8 4395.0 9 4380.5 10 4366.0 11 4236.5 12 4107.0 13 4046.5 14 3986.0 15 3679.0 16 3372.0 17 3224.0 18 3076.0 19 2963.5 20 2851.0 21 2775.0 22 2699.0 23 2751.5 24 2804.0 25 3022.5 26 3390.0 27 3539.0 28 3840.5 29 4142.0 30 4668.5 31 5195.0 32 5905.5 33 6616.0 34 7791.0 35 8966.0 36 9337.0 37 9708.0 38 10407.5 39 11107.0 40 12958.5 41 14810.0 42 16894.0 43 18978.0 44 21939.0 45 24900.0 46 31432.0 47 37964.0 48 45232.0 49 52500.0 50 53932.0 51 55364.0 52 49500.0 53 43636.0 54 37151.5 55 30667.0 56 26863.5 57 23060.0 58 21144.0 59 19228.0 60 17393.5 61 15559.0 62 14093.0 63 12627.0 64 11219.5 65 9812.0 66 8425.5 67 7039.0 68 5987.5 69 4936.0 70 4054.0 71 3172.0 72 2828.0 73 2484.0 74 2241.5 75 1648.5 76 1298.0 77 1003.0 78 708.0 79 524.5 80 341.0 81 242.0 82 143.0 83 88.5 84 34.0 85 26.5 86 19.0 87 13.0 88 7.0 89 5.5 90 4.0 91 3.0 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 490641.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.17542353142883 #Duplication Level Percentage of deduplicated Percentage of total 1 71.4300513790177 30.125926697817935 2 10.136944070725814 8.55059818994535 3 4.895584759064881 6.194200819427078 4 3.0476563802644274 5.141447944636542 5 2.2167371328732384 4.6745913718387015 6 1.6631891935079253 4.208742518945536 7 1.2071412825705914 3.563818639828082 8 0.989977539262635 3.340217760400267 9 0.7944845413537112 3.0156949818689176 >10 3.5003539141064106 23.10257400207945 >50 0.07452731615576035 2.162659396558718 >100 0.038968531323018425 2.4891024269567965 >500 0.003409746490764112 0.9055763864332749 >1k 4.871066415377303E-4 0.2863823690308497 >5k 0.0 0.0 >10k+ 4.871066415377303E-4 2.2384664942325236 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10896 2.2207683418222284 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCC 1394 0.28411812302681594 No Hit CTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGCT 854 0.17405801798056011 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 757 0.15428796207410306 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGC 698 0.14226287652275288 No Hit GCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 567 0.1155631102985686 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 517 0.1053723598313227 No Hit TCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 510 0.10394565476590828 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 505 0.10292657971918368 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18812125362535947 0.0 2 0.0 0.0 0.0 0.6014580925768536 0.0 3 0.0 0.0 0.0 0.8937288159774662 0.0 4 0.0 0.0 0.0 1.367802527713746 0.0 5 0.0 0.0 0.0 2.563585187540381 0.0 6 0.0 0.0 0.0 4.094643537739406 0.0 7 0.0 0.0 0.0 5.373582721378768 0.0 8 0.0 0.0 0.0 7.171434918810291 0.0 9 0.0 0.0 0.0 8.26673677902988 0.0 10 0.0 0.0 0.0 10.19951451264774 0.0 11 0.0 0.0 0.0 13.96234721517362 0.0 12 0.0 0.0 0.0 17.082958823253662 0.0 13 0.0 0.0 0.0 18.240831891342143 0.0 14 0.0 0.0 0.0 18.782979816199624 0.0 15 0.0 0.0 0.0 19.38076923860827 0.0 16 0.0 0.0 0.0 20.644626111556107 0.0 17 0.0 0.0 0.0 22.141443540185186 0.0 18 0.0 0.0 0.0 23.53105427389884 0.0 19 0.0 0.0 0.0 24.36119280696069 0.0 20 0.0 0.0 0.0 25.147918743032076 0.0 21 0.0 0.0 0.0 25.984171726374274 0.0 22 0.0 0.0 0.0 26.73033847558602 0.0 23 0.0 0.0 0.0 27.297351831583583 0.0 24 0.0 0.0 0.0 27.668295148591334 0.0 25 0.0 0.0 0.0 27.944872116272386 0.0 26 0.0 0.0 0.0 28.174367816794764 0.0 27 0.0 0.0 0.0 28.424652648270325 0.0 28 0.0 0.0 0.0 28.65740938894222 0.0 29 0.0 0.0 0.0 28.909936185520575 0.0 30 0.0 0.0 0.0 29.219123554696814 0.0 31 0.0 0.0 0.0 29.457383300621025 0.0 32 0.0 0.0 0.0 29.86949724951645 0.0 33 0.0 0.0 0.0 30.11448289074904 0.0 34 0.0 0.0 0.0 30.35396552672932 0.0 35 0.0 0.0 0.0 30.633803534559892 0.0 36 0.0 0.0 0.0 30.859019119886028 0.0 37 0.0 0.0 0.0 31.089126265436438 0.0 38 0.0 0.0 0.0 31.409319645117307 0.0 39 2.038150093449182E-4 0.0 0.0 32.08924651629195 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGG 20 7.02933E-4 45.0 2 TACTCGA 20 7.02933E-4 45.0 44 CGTTTCG 20 7.02933E-4 45.0 1 ACGAACG 20 7.02933E-4 45.0 21 CGTTTTT 4815 0.0 43.551403 1 GGCGATA 55 6.002665E-11 40.909092 8 GCGCGAC 45 1.9244908E-8 40.0 9 GCTTGCG 90 0.0 40.0 1 GTACGGG 45 1.9244908E-8 40.0 3 AACACGT 255 0.0 39.705883 41 GACCGAT 210 0.0 39.642857 9 GGACCGA 210 0.0 39.642857 8 ACGTGAG 250 0.0 39.600002 44 CGTGGCA 40 3.452824E-7 39.375 15 TCAGACG 40 3.452824E-7 39.375 22 GCGATTC 150 0.0 39.000004 9 CTTGTTG 225 0.0 39.0 1 TGTACGG 35 6.2409727E-6 38.571426 2 CACGACC 365 0.0 38.219177 27 ACACGTG 265 0.0 38.207546 42 >>END_MODULE