SRR2933612.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933612.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24786
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	693	2.795933188090051	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCC	236	0.9521504074880982	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGC	133	0.5365932381182926	No Hit
CCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC	89	0.3590736706205116	No Hit
CTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGCT	78	0.31469377874606635	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	57	0.22996853062212538	No Hit
TCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC	46	0.18558863874768014	No Hit
TTTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCG	44	0.177519567497781	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCG	42	0.1694504962478819	No Hit
CGCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTG	33	0.13313967562333576	No Hit
GCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC	31	0.12507060437343662	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30	0.12103606874848705	No Hit
TCCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTG	26	0.10489792624868877	No Hit
TTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGG	25	0.10086339062373921	No Hit
TTTCCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTC	25	0.10086339062373921	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGACC	20	6.900203E-4	45.0	10
CGCTGAA	20	6.900203E-4	45.0	37
TTGTTGG	50	2.0008883E-11	45.0	2
GCGACCT	20	6.900203E-4	45.0	11
GCGACCC	20	6.900203E-4	45.0	31
CCGCTGA	20	6.900203E-4	45.0	36
GCGCGAC	20	6.900203E-4	45.0	9
GGCGACC	20	6.900203E-4	45.0	30
ACCCGCT	20	6.900203E-4	45.0	34
CTGAATT	20	6.900203E-4	45.0	39
CGGCGTT	20	6.900203E-4	45.0	43
TTGGGGT	20	6.900203E-4	45.0	5
TTGGGAC	20	6.900203E-4	45.0	5
CTGCGGG	20	6.900203E-4	45.0	3
TAACCCG	20	6.900203E-4	45.0	38
TCAGATC	20	6.900203E-4	45.0	17
GGCTTTG	25	3.7809343E-5	45.0	1
CTCAGAT	20	6.900203E-4	45.0	16
CCTCAGA	20	6.900203E-4	45.0	15
CAGATCA	20	6.900203E-4	45.0	18