##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933612.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 24786 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32264181392722 33.0 31.0 34.0 31.0 34.0 2 32.47038650851287 34.0 31.0 34.0 31.0 34.0 3 32.595295731461306 34.0 31.0 34.0 31.0 34.0 4 36.072419914467844 37.0 35.0 37.0 35.0 37.0 5 36.054587267005566 37.0 35.0 37.0 35.0 37.0 6 36.00576938594368 37.0 35.0 37.0 35.0 37.0 7 36.020051642055996 37.0 35.0 37.0 35.0 37.0 8 35.85310255789559 37.0 35.0 37.0 35.0 37.0 9 37.69821673525377 39.0 38.0 39.0 35.0 39.0 10 37.232631324134594 39.0 37.0 39.0 34.0 39.0 11 37.206931332203666 39.0 37.0 39.0 34.0 39.0 12 37.19708706527879 39.0 37.0 39.0 34.0 39.0 13 37.19934640522876 39.0 37.0 39.0 34.0 39.0 14 38.35879125312677 40.0 38.0 41.0 34.0 41.0 15 38.444323408375695 40.0 38.0 41.0 34.0 41.0 16 38.477850399419026 40.0 38.0 41.0 34.0 41.0 17 38.42507867344469 40.0 38.0 41.0 34.0 41.0 18 38.21419349632857 39.0 38.0 41.0 34.0 41.0 19 38.004922133462436 39.0 37.0 41.0 34.0 41.0 20 37.73715000403453 39.0 35.0 41.0 34.0 41.0 21 37.636205922698295 39.0 35.0 41.0 33.0 41.0 22 37.6080045186799 39.0 35.0 41.0 33.0 41.0 23 37.53925603163076 39.0 35.0 41.0 33.0 41.0 24 37.45800048414427 39.0 35.0 41.0 33.0 41.0 25 37.361413701282984 39.0 35.0 41.0 33.0 41.0 26 37.214032114903574 39.0 35.0 41.0 33.0 41.0 27 37.160372791091746 39.0 35.0 41.0 33.0 41.0 28 37.03808601629952 39.0 35.0 41.0 33.0 41.0 29 36.89707899620754 39.0 35.0 41.0 32.0 41.0 30 36.81848624223352 39.0 35.0 41.0 32.0 41.0 31 36.60263858629872 39.0 35.0 41.0 31.0 41.0 32 36.32502218994594 39.0 35.0 41.0 30.0 41.0 33 36.07782619220528 39.0 35.0 41.0 30.0 41.0 34 35.77301702574034 39.0 35.0 41.0 27.0 41.0 35 35.51424191075607 39.0 35.0 41.0 25.0 41.0 36 35.39481965625757 39.0 35.0 41.0 24.0 41.0 37 35.29399661099008 38.0 35.0 41.0 24.0 41.0 38 35.13677075768579 38.0 35.0 40.0 23.0 41.0 39 35.07209715161785 38.0 35.0 40.0 23.0 41.0 40 34.91749374646978 38.0 35.0 40.0 23.0 41.0 41 34.784676833696444 38.0 35.0 40.0 22.0 41.0 42 34.69047042685387 38.0 34.0 40.0 22.0 41.0 43 34.498749293956266 38.0 34.0 40.0 21.0 41.0 44 34.34636488340192 38.0 34.0 40.0 21.0 41.0 45 34.33139675623336 37.0 34.0 40.0 21.0 41.0 46 34.134188654885826 37.0 33.0 40.0 20.0 41.0 47 33.97292826595659 37.0 33.0 40.0 20.0 41.0 48 33.90099249576374 37.0 33.0 40.0 20.0 41.0 49 33.8558863874768 37.0 33.0 40.0 20.0 41.0 50 33.799604615508756 36.0 33.0 40.0 20.0 41.0 51 32.800209795852496 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 1.0 14 0.0 15 5.0 16 3.0 17 5.0 18 12.0 19 20.0 20 26.0 21 35.0 22 61.0 23 117.0 24 191.0 25 289.0 26 427.0 27 540.0 28 477.0 29 482.0 30 485.0 31 543.0 32 680.0 33 925.0 34 1442.0 35 1894.0 36 2421.0 37 3152.0 38 5163.0 39 5387.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.11498426531106 5.357863309933027 40.998951020737515 28.5282014040184 2 33.700476075203746 5.474864843056564 44.420237230694745 16.404421851044944 3 20.789962075365125 5.345759703058178 55.34172516743323 18.52255305414347 4 17.453401113531832 5.809731299927378 54.93423706931332 21.802630517227467 5 15.185992092310174 6.7175018155410315 53.7198418462035 24.376664245945292 6 19.172113289760347 7.451787299281852 58.43621399176955 14.93988541918825 7 69.49487613975631 3.586702170580166 21.907528443476156 5.010893246187364 8 68.6798999435165 4.502541757443718 21.370935205357863 5.446623093681917 9 62.90244492858872 6.588396675542644 23.412410231582346 7.09674816428629 10 30.86823206648915 21.927701121600904 30.3598805777455 16.84418623416445 11 23.125958202210924 21.60090373597999 34.935043976438315 20.338094085370773 12 20.01936577099976 20.36633583474542 39.87331558137658 19.740982812878237 13 21.286209957233922 19.54329056725571 41.07560719761155 18.094892277898815 14 18.445896877269426 23.218752521584765 39.6554506576293 18.6798999435165 15 16.64245945291697 22.657952069716774 39.90559186637618 20.793996610990074 16 17.804405712902444 21.911562979101106 40.45428871136932 19.829742596627128 17 18.171548454772857 22.214153150972322 36.85144839828936 22.762849995965464 18 19.04300814976196 21.709836197853626 38.50157346889373 20.74558218349068 19 19.385943677882675 24.195110142822564 37.07334785766158 19.34559832163318 20 21.532316630355847 25.14322601468571 35.17308157831034 18.151375776648106 21 20.82223836036472 25.635439360929556 35.97998870330025 17.56233357540547 22 18.85741951101428 24.50173485031873 35.05204550956185 21.58880012910514 23 18.740417977890743 25.151295085935608 33.99096264020011 22.117324295973535 24 19.498910675381264 25.163398692810457 34.539659485193255 20.798031146615024 25 20.01936577099976 25.929960461550877 31.860727830226743 22.189945937222625 26 17.10239651416122 27.1120793996611 34.15637860082305 21.629145485354638 27 18.26030823852175 25.256193012184298 36.36326958767046 20.1202291616235 28 17.800371177277498 25.211813120309852 35.35463568143307 21.633180020979587 29 18.562898410392965 24.65101266844186 35.08835633018639 21.697732590978777 30 22.456225288469298 24.154764786573065 34.60421205519245 18.784797869765193 31 20.192850802872588 27.382393286532718 32.08262728959897 20.342128620995723 32 19.837811667877027 26.30920681029614 31.719519083353504 22.13346243847333 33 22.44412168159445 24.723634309690954 30.339707899620755 22.492536109093844 34 19.886226095376422 25.461954329056724 31.816347938352298 22.835471637214557 35 19.511014282256113 26.13168724279835 31.52586137335593 22.831437101589607 36 20.798031146615024 27.709190672153632 32.43766642459453 19.055111756636812 37 20.241265230371987 27.39853142903252 32.849189058339384 19.511014282256113 38 19.878157024126523 28.407165335269912 29.803114661502462 21.911562979101106 39 23.420479302832245 26.402001129669976 27.535705640280806 22.641813927216976 40 22.359396433470508 26.55934801904301 29.117243605261034 21.96401194222545 41 18.59517469539256 29.73049302025337 28.80658436213992 22.867747922214154 42 21.435487775357057 29.16162349713548 29.661905914629227 19.740982812878237 43 21.21358831598483 26.184136205922698 31.977729363350278 20.62454611474219 44 21.4879367384814 25.88154603405148 30.392156862745097 22.23836036472202 45 22.04470265472444 25.014120874687322 28.68151375776648 24.259662712821754 46 21.330589849108367 26.607762446542406 30.896473815863796 21.165173888485437 47 19.43435810538207 29.197934317760026 31.654966513354317 19.712741063503593 48 18.546760267893163 27.882675704026465 32.57484063584282 20.995723392237554 49 20.959412571613008 26.09537642217381 31.562172193980476 21.383038812232712 50 19.506979746631163 25.15936415718551 30.86016299523925 24.473493100944083 51 19.25683853788429 25.687888324053905 29.22214153150972 25.833131606552083 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 71.0 1 98.0 2 125.0 3 601.0 4 1077.0 5 704.0 6 331.0 7 337.5 8 344.0 9 351.5 10 359.0 11 353.0 12 347.0 13 335.0 14 323.0 15 295.5 16 268.0 17 248.5 18 229.0 19 239.0 20 249.0 21 242.5 22 236.0 23 248.5 24 261.0 25 264.0 26 279.5 27 292.0 28 303.5 29 315.0 30 332.0 31 349.0 32 370.5 33 392.0 34 460.5 35 529.0 36 522.5 37 516.0 38 585.5 39 655.0 40 765.0 41 875.0 42 978.0 43 1081.0 44 1169.0 45 1257.0 46 1460.5 47 1664.0 48 1850.5 49 2037.0 50 2036.0 51 2035.0 52 1790.0 53 1545.0 54 1367.5 55 1190.0 56 1125.5 57 1061.0 58 1029.5 59 998.0 60 969.5 61 941.0 62 844.5 63 748.0 64 671.0 65 594.0 66 508.0 67 422.0 68 334.0 69 246.0 70 223.5 71 201.0 72 174.0 73 147.0 74 117.0 75 76.5 76 66.0 77 49.0 78 32.0 79 23.0 80 14.0 81 9.5 82 5.0 83 4.0 84 3.0 85 2.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 24786.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 78.39909626402 #Duplication Level Percentage of deduplicated Percentage of total 1 87.92713050638122 68.93407568788832 2 8.95944833264718 14.048253046074397 3 1.729106628242075 4.066811909949164 4 0.514615067929189 1.6138142499798274 5 0.23157678056813505 0.907770515613653 6 0.13894606834088102 0.6535947712418301 7 0.11321531494442158 0.6213184862422335 8 0.06689995883079457 0.41959170499475507 9 0.08748456154796212 0.6172839506172839 >10 0.2006998764923837 2.9290728637133867 >50 0.01543845203787567 0.9037359799887034 >100 0.01029230135858378 1.4887436456063907 >500 0.00514615067929189 2.795933188090051 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 693 2.795933188090051 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCC 236 0.9521504074880982 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGC 133 0.5365932381182926 No Hit CCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 89 0.3590736706205116 No Hit CTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGCT 78 0.31469377874606635 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 57 0.22996853062212538 No Hit TCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 46 0.18558863874768014 No Hit TTTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCG 44 0.177519567497781 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCG 42 0.1694504962478819 No Hit CGCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTG 33 0.13313967562333576 No Hit GCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 31 0.12507060437343662 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30 0.12103606874848705 No Hit TCCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTG 26 0.10489792624868877 No Hit TTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGG 25 0.10086339062373921 No Hit TTTCCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTC 25 0.10086339062373921 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.34697006374566286 0.0 2 0.0 0.0 0.0 1.1175663681110304 0.0 3 0.0 0.0 0.0 1.6339869281045751 0.0 4 0.0 0.0 0.0 2.1947873799725652 0.0 5 0.0 0.0 0.0 3.6068748487049143 0.0 6 0.0 0.0 0.0 4.905995319938675 0.0 7 0.0 0.0 0.0 5.79359315742758 0.0 8 0.0 0.0 0.0 7.076575486161543 0.0 9 0.0 0.0 0.0 7.742273864278221 0.0 10 0.0 0.0 0.0 8.928427338013394 0.0 11 0.0 0.0 0.0 11.942225449850723 0.0 12 0.0 0.0 0.0 13.959493262325505 0.0 13 0.0 0.0 0.0 14.67764060356653 0.0 14 0.0 0.0 0.0 14.964092632937948 0.0 15 0.0 0.0 0.0 15.33526991043331 0.0 16 0.0 0.0 0.0 16.150246106673123 0.0 17 0.0 0.0 0.0 17.20325990478496 0.0 18 0.0 0.0 0.0 18.13120309852336 0.0 19 0.0 0.0 0.0 18.59920923101751 0.0 20 0.0 0.0 0.0 19.06318082788671 0.0 21 0.0 0.0 0.0 19.567497781005407 0.0 22 0.0 0.0 0.0 19.91850238037602 0.0 23 0.0 0.0 0.0 20.204954409747437 0.0 24 0.0 0.0 0.0 20.442992011619463 0.0 25 0.0 0.0 0.0 20.63664972161704 0.0 26 0.0 0.0 0.0 20.798031146615024 0.0 27 0.0 0.0 0.0 20.93520535786331 0.0 28 0.0 0.0 0.0 21.084483175986446 0.0 29 0.0 0.0 0.0 21.233760994109577 0.0 30 0.0 0.0 0.0 21.379004276607763 0.0 31 0.0 0.0 0.0 21.467764060356654 0.0 32 0.0 0.0 0.0 21.572661986605343 0.0 33 0.0 0.0 0.0 21.65335269910433 0.0 34 0.0 0.0 0.0 21.76631969660292 0.0 35 0.0 0.0 0.0 21.87525215847656 0.0 36 0.0 0.0 0.0 21.9841846203502 0.0 37 0.0 0.0 0.0 22.097151617848784 0.0 38 0.0 0.0 0.0 22.210118615347373 0.0 39 0.0 0.0 0.0 22.33518921972081 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGACC 20 6.900203E-4 45.0 10 CGCTGAA 20 6.900203E-4 45.0 37 TTGTTGG 50 2.0008883E-11 45.0 2 GCGACCT 20 6.900203E-4 45.0 11 GCGACCC 20 6.900203E-4 45.0 31 CCGCTGA 20 6.900203E-4 45.0 36 GCGCGAC 20 6.900203E-4 45.0 9 GGCGACC 20 6.900203E-4 45.0 30 ACCCGCT 20 6.900203E-4 45.0 34 CTGAATT 20 6.900203E-4 45.0 39 CGGCGTT 20 6.900203E-4 45.0 43 TTGGGGT 20 6.900203E-4 45.0 5 TTGGGAC 20 6.900203E-4 45.0 5 CTGCGGG 20 6.900203E-4 45.0 3 TAACCCG 20 6.900203E-4 45.0 38 TCAGATC 20 6.900203E-4 45.0 17 GGCTTTG 25 3.7809343E-5 45.0 1 CTCAGAT 20 6.900203E-4 45.0 16 CCTCAGA 20 6.900203E-4 45.0 15 CAGATCA 20 6.900203E-4 45.0 18 >>END_MODULE