SRR2933611.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933611.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24563
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	675	2.748035663396165	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCC	223	0.9078695599071774	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGC	93	0.3786182469568049	No Hit
CTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGCT	69	0.2809103122582746	No Hit
CCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC	69	0.2809103122582746	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCG	54	0.21984285307169318	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	49	0.19948703334283271	No Hit
TCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC	42	0.17098888572242804	No Hit
TTTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCG	39	0.15877539388511178	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	32	0.13027724626470708	No Hit
GCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC	27	0.10992142653584659	No Hit
TTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGG	25	0.1017790986443024	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGTTGG	20	6.8991014E-4	45.0	2
CTCCTGG	20	6.8991014E-4	45.0	2
TGTTTGG	35	1.1483098E-7	45.0	2
TTCCTGG	25	3.7800295E-5	45.0	2
TTGGGCG	25	3.7800295E-5	45.0	5
TTGGGCA	25	3.7800295E-5	45.0	5
GCTCGGG	25	3.7800295E-5	45.0	3
CGGGACT	25	3.7800295E-5	45.0	6
TTTAGGG	20	6.8991014E-4	45.0	3
CTCGGGA	25	3.7800295E-5	45.0	4
GGGAACA	25	3.7800295E-5	45.0	7
TGGGATT	25	3.7800295E-5	45.0	6
TGGGAGC	25	3.7800295E-5	45.0	6
TGGGAAC	25	3.7800295E-5	45.0	6
GGAACAT	20	6.8991014E-4	45.0	8
CGTTTTT	260	0.0	44.134617	1
TGGGCTT	40	3.2777098E-7	39.375	6
TCTTTTG	40	3.2777098E-7	39.375	1
GGGGATC	40	3.2777098E-7	39.375	7
TTTGGGA	75	0.0	39.000004	4