##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933611.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 24563 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.26861539714204 33.0 31.0 34.0 30.0 34.0 2 32.43211334120425 34.0 31.0 34.0 31.0 34.0 3 32.54744941578797 34.0 31.0 34.0 31.0 34.0 4 35.99014778325123 37.0 35.0 37.0 35.0 37.0 5 36.028253877783655 37.0 35.0 37.0 35.0 37.0 6 36.007938769694256 37.0 35.0 37.0 35.0 37.0 7 35.95077962789561 37.0 35.0 37.0 35.0 37.0 8 35.81150510931075 37.0 35.0 37.0 35.0 37.0 9 37.65468387411961 39.0 38.0 39.0 35.0 39.0 10 37.29959695476937 39.0 37.0 39.0 34.0 39.0 11 37.2246468265277 39.0 37.0 39.0 34.0 39.0 12 37.207995765989494 39.0 37.0 39.0 34.0 39.0 13 37.19386882709767 39.0 37.0 39.0 34.0 39.0 14 38.405447217359445 40.0 38.0 41.0 34.0 41.0 15 38.46280991735537 40.0 38.0 41.0 34.0 41.0 16 38.55583601351626 40.0 38.0 41.0 34.0 41.0 17 38.5188291332492 40.0 38.0 41.0 34.0 41.0 18 38.31999348613769 40.0 38.0 41.0 34.0 41.0 19 38.14794609778936 40.0 37.0 41.0 34.0 41.0 20 37.8423645320197 40.0 35.0 41.0 34.0 41.0 21 37.76863575296177 39.0 35.0 41.0 34.0 41.0 22 37.73936408419167 39.0 35.0 41.0 34.0 41.0 23 37.6477628954118 39.0 35.0 41.0 33.0 41.0 24 37.53865570166511 39.0 35.0 41.0 33.0 41.0 25 37.47184790131499 39.0 35.0 41.0 33.0 41.0 26 37.388674021902865 39.0 35.0 41.0 33.0 41.0 27 37.30602939380369 39.0 35.0 41.0 33.0 41.0 28 37.22973578145992 39.0 35.0 41.0 33.0 41.0 29 37.06603427920042 39.0 35.0 41.0 33.0 41.0 30 36.87285754997354 39.0 35.0 41.0 32.0 41.0 31 36.65688230265033 39.0 35.0 41.0 31.0 41.0 32 36.489353906281806 39.0 35.0 41.0 31.0 41.0 33 36.16545210275618 39.0 35.0 41.0 30.0 41.0 34 35.8410210479176 39.0 35.0 41.0 27.0 41.0 35 35.64096405162236 39.0 35.0 41.0 26.0 41.0 36 35.51577576028987 39.0 35.0 41.0 25.0 41.0 37 35.421121198550665 39.0 35.0 41.0 25.0 41.0 38 35.271017383870046 38.0 35.0 41.0 24.0 41.0 39 35.232870577698165 38.0 35.0 41.0 24.0 41.0 40 35.022147131865 38.0 35.0 41.0 23.0 41.0 41 34.904856898587305 38.0 35.0 40.0 23.0 41.0 42 34.75809143834222 38.0 35.0 40.0 22.0 41.0 43 34.652241175752145 38.0 34.0 40.0 22.0 41.0 44 34.51695639783414 38.0 34.0 40.0 21.0 41.0 45 34.48019378740382 38.0 34.0 40.0 22.0 41.0 46 34.303057444123276 37.0 34.0 40.0 20.0 41.0 47 34.22228555143916 37.0 34.0 40.0 20.0 41.0 48 34.10300044782804 37.0 34.0 40.0 20.0 41.0 49 34.0785734641534 37.0 34.0 40.0 20.0 41.0 50 33.90766600170989 36.0 33.0 40.0 20.0 41.0 51 33.12221634165208 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 0.0 14 1.0 15 2.0 16 5.0 17 5.0 18 9.0 19 13.0 20 24.0 21 40.0 22 80.0 23 99.0 24 163.0 25 275.0 26 456.0 27 485.0 28 490.0 29 477.0 30 477.0 31 545.0 32 610.0 33 842.0 34 1440.0 35 1769.0 36 2465.0 37 3008.0 38 4891.0 39 5887.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.0432357611041 5.158164719293246 40.05211089850588 28.746488621096773 2 34.18556365264829 5.67113137646053 43.598094695273375 16.5452102756178 3 21.279973944550747 5.610063917273949 54.724585759068525 18.385376379106784 4 17.26173513007369 6.074176607091967 53.90628180596833 22.757806456866017 5 15.568130928632495 6.87619590440907 53.74750641208321 23.808166754875216 6 19.45609249684485 7.820705939828197 57.313846028579576 15.409355534747386 7 69.29935268493263 3.896103896103896 22.130847209217112 4.673696209746367 8 69.09172332369825 4.734763668932948 20.933925009160117 5.2395879982086875 9 63.10304115946749 6.4609371819403165 23.494687131050767 6.941334527541423 10 31.742865285185033 22.25298212759028 29.601433049708913 16.402719537515775 11 23.38476570451492 21.662663355453322 34.87359035948378 20.078980580547977 12 20.559377926149086 20.335463909131622 39.795627569922246 19.309530594797053 13 21.455033994218947 20.160403859463422 40.25974025974026 18.124821886577372 14 18.686642511093922 22.8921548670765 39.77527175019338 18.645930871636203 15 17.22916581850751 22.497251964336602 39.811912225705335 20.461669991450556 16 18.56450759272076 21.817367585392663 39.85262386516305 19.76550095672353 17 18.08411024711965 22.277409111264912 37.10458820176689 22.53389243984855 18 19.020477954647234 21.605667060212514 39.05060456784595 20.323250417294307 19 19.785856776452388 24.349631559662907 36.55905223303343 19.30545943085128 20 21.084558075153687 25.64833285836421 35.374343524813746 17.89276554166836 21 20.901355697593942 25.72568497333388 36.001302772462644 17.371656556609537 22 19.525302283922976 23.681960672556286 35.305133737735616 21.487603305785125 23 18.588934576395392 25.32671090664821 33.63188535602329 22.452469160933113 24 19.781785612506617 25.15572202092578 34.7392419492733 20.323250417294307 25 19.65965069413345 26.07987623661605 32.341326385213534 21.919146684036967 26 17.778772951186745 27.113951878842162 33.876155192769616 21.23111997720148 27 18.755852298172044 24.748605626348574 36.23743028131743 20.25811179416195 28 17.34315840898913 25.929243170622478 35.337703049301794 21.389895371086592 29 18.654073199527748 24.540976265114196 35.203354639091316 21.601595896266744 30 22.118633717379797 24.43512600252412 34.69445914586981 18.751781134226274 31 20.19704433497537 27.109880714896388 32.12555469608761 20.56752025404063 32 19.912062858771325 26.393355860440497 31.661442006269592 22.033139274518586 33 22.090135569759394 24.418841346741033 31.278752595367017 22.212270488132557 34 20.33139274518585 25.530269103936813 31.78357692464275 22.354761226234583 35 19.338028742417457 26.275292106013108 32.17440866343688 22.212270488132557 36 20.579733745877945 28.33530106257379 32.04413141717217 19.040833774376097 37 19.96498799006636 27.87525953670154 32.691446484549935 19.468305988682165 38 20.237755974433092 28.396368521760373 29.296095753776 22.069779750030534 39 23.34812522900297 26.975532304685913 27.252371452998414 22.42397101331271 40 22.167487684729064 27.077311403330214 28.998900785734644 21.75630012620608 41 19.061189594104956 29.809062410943287 29.27166877010137 21.858079224850385 42 21.426535846598544 29.340878557179494 29.28795342588446 19.9446321703375 43 21.060131091479054 26.23050930260962 32.47160363147824 20.237755974433092 44 21.271831616659203 26.09616089239914 29.670642836787035 22.96136465415462 45 22.187843504457923 25.22493180800391 29.186174327240156 23.401050360298008 46 21.121198550665635 27.28901192851036 30.171396002117007 21.418393518707 47 18.902414200219845 30.037047591906525 31.486381956601395 19.57415625127224 48 18.686642511093922 28.35158571835688 32.39425151650857 20.56752025404063 49 20.750722631600375 26.495134959084805 31.767292268859666 20.986850140455157 50 19.47237715262794 25.705329153605017 30.407523510971785 24.414770182795262 51 19.59858323494687 26.075805072670278 29.10475104832472 25.220860644058135 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 65.0 1 96.0 2 127.0 3 620.5 4 1114.0 5 712.0 6 310.0 7 326.0 8 342.0 9 343.0 10 344.0 11 343.0 12 342.0 13 345.0 14 348.0 15 310.0 16 272.0 17 250.5 18 229.0 19 236.0 20 243.0 21 241.5 22 240.0 23 238.5 24 237.0 25 254.0 26 304.5 27 338.0 28 343.0 29 348.0 30 350.5 31 353.0 32 383.5 33 414.0 34 451.5 35 489.0 36 505.0 37 521.0 38 593.5 39 666.0 40 755.0 41 844.0 42 928.0 43 1012.0 44 1096.0 45 1180.0 46 1357.5 47 1535.0 48 1766.5 49 1998.0 50 2031.5 51 2065.0 52 1828.0 53 1591.0 54 1379.5 55 1168.0 56 1094.0 57 1020.0 58 988.0 59 956.0 60 924.0 61 892.0 62 826.5 63 761.0 64 678.0 65 595.0 66 510.5 67 426.0 68 369.5 69 313.0 70 270.0 71 227.0 72 193.0 73 159.0 74 123.0 75 70.0 76 53.0 77 46.0 78 39.0 79 28.5 80 18.0 81 12.0 82 6.0 83 4.5 84 3.0 85 2.0 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 24563.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 79.01722102349062 #Duplication Level Percentage of deduplicated Percentage of total 1 87.98495543304654 69.52326670195009 2 8.903086197125045 14.069942596588364 3 1.7363078983976505 4.115946749175589 4 0.5152248956669586 1.6284655783088384 5 0.25246019887680976 0.9974351667141637 6 0.1597197176567572 0.7572364939136098 7 0.09274048122005256 0.5129666571672842 8 0.08243598330671338 0.5211089850588283 9 0.05152248956669587 0.36640475511948867 >10 0.1906332113967747 2.691039368155356 >50 0.020608995826678345 1.1602817245450474 >100 0.005152248956669586 0.9078695599071774 >500 0.005152248956669586 2.748035663396165 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 675 2.748035663396165 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCC 223 0.9078695599071774 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGC 93 0.3786182469568049 No Hit CTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGCT 69 0.2809103122582746 No Hit CCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 69 0.2809103122582746 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCG 54 0.21984285307169318 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 49 0.19948703334283271 No Hit TCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 42 0.17098888572242804 No Hit TTTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCG 39 0.15877539388511178 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 32 0.13027724626470708 No Hit GCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 27 0.10992142653584659 No Hit TTTCTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCGTTCGG 25 0.1017790986443024 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.28905264014981885 0.0 2 0.0 0.0 0.0 0.8997272320156333 0.0 3 0.0 0.0 0.0 1.3434841021047919 0.0 4 0.0 0.0 0.0 1.8849489068924805 0.0 5 0.0 0.0 0.0 3.179579041648007 0.0 6 0.0 0.0 0.0 4.262508651223385 0.0 7 0.0 0.0 0.0 5.027887473028539 0.0 8 0.0 0.0 0.0 6.155599886007409 0.0 9 0.0 0.0 0.0 6.754060986035908 0.0 10 0.0 0.0 0.0 7.991694825550625 0.0 11 0.0 0.0 0.0 10.83743842364532 0.0 12 0.0 0.0 0.0 12.693889182917395 0.0 13 0.0 0.0 0.0 13.385987053698653 0.0 14 0.0 0.0 0.0 13.609901070716118 0.0 15 0.0 0.0 0.0 14.017017465293327 0.0 16 0.0 0.0 0.0 14.725399991857673 0.0 17 0.0 0.0 0.0 15.84904124089077 0.0 18 0.0 0.0 0.0 16.630704718479013 0.0 19 0.0 0.0 0.0 17.16402719537516 0.0 20 0.0 0.0 0.0 17.567072426006597 0.0 21 0.0 0.0 0.0 17.9456906729634 0.0 22 0.0 0.0 0.0 18.287668444408258 0.0 23 0.0 0.0 0.0 18.62964621585311 0.0 24 0.0 0.0 0.0 18.85763139681635 0.0 25 0.0 0.0 0.0 18.987908643081056 0.0 26 0.0 0.0 0.0 19.114114725399993 0.0 27 0.0 0.0 0.0 19.24846313561047 0.0 28 0.0 0.0 0.0 19.370598053983635 0.0 29 0.0 0.0 0.0 19.48051948051948 0.0 30 0.0 0.0 0.0 19.610796726784187 0.0 31 0.004071163945772096 0.0 0.0 19.74921630094044 0.0 32 0.004071163945772096 0.0 0.0 19.903920530879777 0.0 33 0.004071163945772096 0.0 0.0 20.03826894109026 0.0 34 0.004071163945772096 0.0 0.0 20.127834547897244 0.0 35 0.004071163945772096 0.0 0.0 20.245898302324633 0.0 36 0.004071163945772096 0.0 0.0 20.384317876480885 0.0 37 0.004071163945772096 0.0 0.0 20.49016813907096 0.0 38 0.004071163945772096 0.0 0.0 20.624516549281438 0.0 39 0.004071163945772096 0.0 0.0 20.783291943166553 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTTGG 20 6.8991014E-4 45.0 2 CTCCTGG 20 6.8991014E-4 45.0 2 TGTTTGG 35 1.1483098E-7 45.0 2 TTCCTGG 25 3.7800295E-5 45.0 2 TTGGGCG 25 3.7800295E-5 45.0 5 TTGGGCA 25 3.7800295E-5 45.0 5 GCTCGGG 25 3.7800295E-5 45.0 3 CGGGACT 25 3.7800295E-5 45.0 6 TTTAGGG 20 6.8991014E-4 45.0 3 CTCGGGA 25 3.7800295E-5 45.0 4 GGGAACA 25 3.7800295E-5 45.0 7 TGGGATT 25 3.7800295E-5 45.0 6 TGGGAGC 25 3.7800295E-5 45.0 6 TGGGAAC 25 3.7800295E-5 45.0 6 GGAACAT 20 6.8991014E-4 45.0 8 CGTTTTT 260 0.0 44.134617 1 TGGGCTT 40 3.2777098E-7 39.375 6 TCTTTTG 40 3.2777098E-7 39.375 1 GGGGATC 40 3.2777098E-7 39.375 7 TTTGGGA 75 0.0 39.000004 4 >>END_MODULE