SRR2933608.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933608.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	73196
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3509	4.793977812995245	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCC	435	0.5942947702060222	No Hit
CCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC	400	0.5464779496147331	No Hit
CTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGCT	330	0.4508443084321548	Illumina Single End Adapter 2 (95% over 21bp)
TCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC	206	0.2814361440515875	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGC	201	0.27460516968140336	No Hit
GCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC	188	0.25684463631892457	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	133	0.18170391824689874	No Hit
TCCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG	88	0.12022514891524128	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	79	0.10792939504890979	No Hit
GCCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG	76	0.10383081042679929	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCG	76	0.10383081042679929	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	75	0.10246461555276246	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGACCGA	25	3.854977E-5	45.000004	8
TCCGGGA	35	1.1912016E-7	45.000004	4
GACCGAT	25	3.854977E-5	45.000004	9
ATTTGGG	25	3.854977E-5	45.000004	3
TGGGCAT	25	3.854977E-5	45.000004	6
CTATGGG	35	1.1912016E-7	45.000004	3
TTTGCGG	25	3.854977E-5	45.000004	2
ATGGGCT	20	6.9900084E-4	45.0	5
GCCTTGG	20	6.9900084E-4	45.0	2
GATACTG	20	6.9900084E-4	45.0	1
GCGATTT	20	6.9900084E-4	45.0	9
TCAGGGC	20	6.9900084E-4	45.0	4
GAAGCTA	20	6.9900084E-4	45.0	7
AGCTACG	20	6.9900084E-4	45.0	9
TCAACAT	20	6.9900084E-4	45.0	28
ACATCAA	20	6.9900084E-4	45.0	25
GCTACGA	20	6.9900084E-4	45.0	10
TTGGGTC	55	1.8189894E-12	45.0	5
GTGGGAC	20	6.9900084E-4	45.0	5
CGAATAT	20	6.9900084E-4	45.0	14