##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933608.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 73196 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06277665446199 33.0 31.0 34.0 30.0 34.0 2 32.25107929395049 34.0 31.0 34.0 30.0 34.0 3 32.334840701677685 34.0 31.0 34.0 30.0 34.0 4 35.94399967211323 37.0 35.0 37.0 35.0 37.0 5 35.966910760150824 37.0 35.0 37.0 35.0 37.0 6 35.93923165200284 37.0 35.0 37.0 35.0 37.0 7 35.98162467894421 37.0 35.0 37.0 35.0 37.0 8 35.815017214055416 37.0 35.0 37.0 35.0 37.0 9 37.64871031203891 39.0 38.0 39.0 35.0 39.0 10 37.086671402808896 39.0 37.0 39.0 33.0 39.0 11 37.078078037051206 39.0 37.0 39.0 33.0 39.0 12 37.220203289797254 39.0 37.0 39.0 34.0 39.0 13 37.17554237936499 39.0 37.0 39.0 33.0 39.0 14 38.32164325919449 40.0 38.0 41.0 34.0 41.0 15 38.34531941636155 40.0 38.0 41.0 34.0 41.0 16 38.408915787747965 40.0 38.0 41.0 34.0 41.0 17 38.394475107929395 40.0 38.0 41.0 34.0 41.0 18 38.07363790371058 39.0 38.0 40.0 34.0 41.0 19 37.67720913711132 38.0 37.0 40.0 34.0 41.0 20 37.143300180337725 38.0 35.0 40.0 34.0 41.0 21 36.99598338707033 38.0 35.0 40.0 33.0 41.0 22 37.014618285152196 38.0 35.0 40.0 33.0 41.0 23 37.010997868736 38.0 35.0 40.0 33.0 41.0 24 36.932332367888954 38.0 35.0 40.0 33.0 41.0 25 36.81560467785125 38.0 35.0 40.0 33.0 41.0 26 36.69841248155637 38.0 35.0 40.0 33.0 41.0 27 36.60245095360402 38.0 35.0 40.0 33.0 41.0 28 36.5119815290453 38.0 35.0 40.0 32.0 41.0 29 36.475312858626154 38.0 35.0 40.0 32.0 41.0 30 36.2583611126291 38.0 35.0 40.0 31.0 41.0 31 35.78194163615498 38.0 35.0 40.0 30.0 41.0 32 35.20626810208208 38.0 35.0 40.0 25.0 41.0 33 34.61267009126182 38.0 34.0 40.0 21.0 41.0 34 34.06306355538554 38.0 34.0 40.0 18.0 41.0 35 33.579293950489095 38.0 33.0 40.0 15.0 41.0 36 33.20686922782666 38.0 33.0 40.0 12.0 41.0 37 32.96891906661566 37.0 32.0 40.0 10.0 41.0 38 32.96435597573638 38.0 32.0 40.0 10.0 41.0 39 33.048650199464454 38.0 33.0 40.0 10.0 41.0 40 32.883422591398435 38.0 32.0 40.0 10.0 41.0 41 32.76487786217826 38.0 31.0 40.0 10.0 41.0 42 32.58723154270725 37.0 31.0 40.0 10.0 41.0 43 32.25445379528936 37.0 31.0 40.0 10.0 41.0 44 31.998442537843598 37.0 30.0 40.0 9.0 41.0 45 32.10394010601672 37.0 31.0 40.0 10.0 41.0 46 31.914039018525603 37.0 30.0 40.0 8.0 41.0 47 31.72110497841412 37.0 29.0 40.0 8.0 41.0 48 31.73303185966446 37.0 29.0 40.0 8.0 41.0 49 31.769550248647466 37.0 29.0 40.0 8.0 41.0 50 31.703112191923054 36.0 29.0 40.0 8.0 41.0 51 30.758456746270287 35.0 26.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 1.0 15 1.0 16 8.0 17 20.0 18 27.0 19 61.0 20 113.0 21 148.0 22 259.0 23 465.0 24 835.0 25 1600.0 26 2435.0 27 2684.0 28 2260.0 29 2082.0 30 2021.0 31 2163.0 32 2357.0 33 2759.0 34 3896.0 35 5567.0 36 7069.0 37 8919.0 38 14144.0 39 11298.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.763484343406745 5.280343188152358 35.58664407891142 37.369528389529485 2 40.31094595333079 4.960653587627739 36.37357232635663 18.354828132684847 3 15.7863817694956 4.867752336193234 61.12629105415597 18.2195748401552 4 13.269850811519754 5.011202797967102 62.06759932236734 19.6513470681458 5 11.900923547734848 5.911525219957374 62.42690857423903 19.760642658068747 6 15.785015574621564 6.471665118312477 65.46942455871906 12.273894748346905 7 61.68369856276299 2.2774468550194 31.636974698070937 4.401879884146675 8 60.62899612000656 2.7378545275698123 30.918356194327558 5.714793158096071 9 55.94841248155637 5.13279414175638 33.02776107984043 5.891032296846823 10 24.825127056123286 21.480682004481118 39.73031313186513 13.963877807530467 11 16.52959178097164 17.662167331548172 45.06940269960107 20.738838187879118 12 15.798677523361931 14.565003552106672 50.461773867424455 19.174545057106947 13 18.752390841029566 16.973605115033607 50.285534728673696 13.98846931526313 14 16.35198644734685 18.307011312093557 49.24586042953167 16.095141811027926 15 12.086726050603858 17.126618940925734 51.73916607464889 19.047488933821523 16 11.536149516367015 16.899830591835617 49.468550193999675 22.095469697797693 17 11.029291218099349 17.290562325810154 47.83594731952566 23.84419913656484 18 12.454232471719767 16.003606754467455 51.42494125362042 20.11721952019236 19 12.99114705721624 18.160828460571615 51.98508115197552 16.862943330236625 20 13.753483796928794 21.109076998743102 48.98491720859063 16.152521995737473 21 12.458331056341878 22.633750478168206 49.173452101207715 15.734466364282202 22 10.531996283949944 21.326301983714956 47.3072299032734 20.834471829061698 23 10.89130553582163 21.50117492759167 45.104923766326024 22.50259577026067 24 12.23700748674791 20.827640854691513 45.214219356248975 21.721132302311602 25 11.066178479698344 23.315481720312587 42.5187168697743 23.099622930214768 26 10.480080878736544 25.525985026504184 44.1431225750041 19.850811519755176 27 11.637247937045741 24.505437455598667 46.16782337832668 17.68949122902891 28 9.508716323296355 21.755287174162522 47.232089185201374 21.503907317339745 29 12.347669271544893 20.54073993114378 45.46969779769386 21.641892999617465 30 17.562435105743482 22.72801792447675 42.54330837750697 17.1662385922728 31 15.909339308158915 29.02617629378654 37.31488059456801 17.74960380348653 32 15.290453030220231 27.364883326957756 36.66047324990437 20.684190392917646 33 19.460079785780643 23.255369145854964 35.58664407891142 21.697906989452974 34 18.242800153013825 22.529919667741407 35.02923657030439 24.198043608940377 35 17.36570304388218 27.192742772829114 32.877479643696375 22.564074539592326 36 18.72096835892672 33.641182578282965 30.70249740422974 16.935351658560577 37 16.910760150827915 33.54145035247827 32.60560686376305 16.94218263293076 38 19.152685939122357 27.422263511667307 35.96098147439751 17.464069074812834 39 24.713099076452266 20.421880977102575 35.74375648942566 19.12126345701951 40 24.724028635444558 20.476528772064047 32.691677140827366 22.107765451664026 41 23.42614350510957 23.908410295644572 29.35679545330346 23.3086507459424 42 27.151756926608012 24.501338870976554 30.698398819607633 17.6485053828078 43 22.979397781299525 23.087327176348435 36.2834034646702 17.649871577681843 44 19.62812175528717 21.991638887370897 35.6973058637084 22.68293349363353 45 23.256735340729 19.600797857806437 32.97447947975299 24.167987321711568 46 24.439860101644896 20.57352860812066 35.68774249959014 19.298868790644296 47 19.25924913929723 24.505437455598667 37.85725995956063 18.378053445543472 48 19.72512159134379 21.865948958959507 39.444778403191435 18.964151046505272 49 23.531340510410406 17.294660910432263 39.601890813705666 19.572107765451662 50 21.860484179463356 15.634734138477512 36.55117765998142 25.95360402207771 51 19.62812175528717 15.213946117274169 33.803759768293354 31.35417235914531 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 137.0 1 324.5 2 512.0 3 3311.5 4 6111.0 5 3818.0 6 1525.0 7 1433.5 8 1342.0 9 1303.5 10 1265.0 11 1226.5 12 1188.0 13 1153.5 14 1119.0 15 1016.0 16 913.0 17 851.5 18 790.0 19 729.0 20 668.0 21 626.0 22 584.0 23 566.5 24 549.0 25 508.0 26 493.5 27 520.0 28 538.5 29 557.0 30 631.5 31 706.0 32 809.0 33 912.0 34 1066.0 35 1220.0 36 1278.0 37 1336.0 38 1560.0 39 1784.0 40 2013.0 41 2242.0 42 2742.0 43 3242.0 44 3801.5 45 4361.0 46 5290.5 47 6220.0 48 7713.0 49 9206.0 50 9226.0 51 9246.0 52 7564.0 53 5882.0 54 4415.5 55 2949.0 56 2361.5 57 1774.0 58 1451.0 59 1128.0 60 1020.5 61 913.0 62 788.5 63 664.0 64 557.0 65 450.0 66 344.5 67 239.0 68 189.5 69 140.0 70 132.0 71 124.0 72 96.0 73 68.0 74 70.5 75 52.0 76 31.0 77 24.5 78 18.0 79 13.5 80 9.0 81 9.5 82 10.0 83 6.0 84 2.0 85 1.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 73196.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.36958303732444 #Duplication Level Percentage of deduplicated Percentage of total 1 80.76060710589859 51.17765998141975 2 11.258192480165574 14.26853926444068 3 3.81812694032425 7.258593365757691 4 1.6320282856157295 4.136838078583529 5 0.7394791307347361 2.343024208973168 6 0.4225595032769921 1.6066451718673151 7 0.3104518799586064 1.3771244330291272 8 0.1832528458088996 0.9290125143450462 9 0.1358226974818903 0.7746324935788841 >10 0.6942048982407727 7.540029509809279 >50 0.028026905829596414 1.20771626864856 >100 0.015091410831321143 2.586206896551724 >500 0.0 0.0 >1k 0.002155915833045878 4.793977812995245 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3509 4.793977812995245 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCC 435 0.5942947702060222 No Hit CCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 400 0.5464779496147331 No Hit CTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGCT 330 0.4508443084321548 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 206 0.2814361440515875 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGC 201 0.27460516968140336 No Hit GCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 188 0.25684463631892457 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 133 0.18170391824689874 No Hit TCCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG 88 0.12022514891524128 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 79 0.10792939504890979 No Hit GCCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG 76 0.10383081042679929 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCG 76 0.10383081042679929 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 75 0.10246461555276246 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5013935187715176 0.0 2 0.0 0.0 0.0 1.7337012951527406 0.0 3 0.0 0.0 0.0 2.4331930706595988 0.0 4 0.0 0.0 0.0 3.369036559374829 0.0 5 0.0 0.0 0.0 5.375976829334936 0.0 6 0.0 0.0 0.0 6.927974206240778 0.0 7 0.0 0.0 0.0 8.258648013552653 0.0 8 0.0 0.0 0.0 10.27378545275698 0.0 9 0.0 0.0 0.0 11.105798131045413 0.0 10 0.0 0.0 0.0 13.458385704136838 0.0 11 0.0 0.0 0.0 19.710093447729385 0.0 12 0.0 0.0 0.0 25.187168697743047 0.0 13 0.0 0.0 0.0 26.93179955188808 0.0 14 0.0 0.0 0.0 27.524728127220065 0.0 15 0.0 0.0 0.0 28.46330400568337 0.0 16 0.0 0.0 0.0 30.513962511612657 0.0 17 0.0 0.0 0.0 33.13295808514126 0.0 18 0.0 0.0 0.0 35.54429203781628 0.0 19 0.0 0.0 0.0 36.821684245040714 0.0 20 0.0 0.0 0.0 38.052625826547896 0.0 21 0.0 0.0 0.0 39.424285480080876 0.0 22 0.0 0.0 0.0 40.57462156401989 0.0 23 0.0 0.0 0.0 41.551450898956226 0.0 24 0.0 0.0 0.0 42.02278813049893 0.0 25 0.0 0.0 0.0 42.35613967976392 0.0 26 0.0 0.0 0.0 42.626646264823215 0.0 27 0.0 0.0 0.0 42.78102628558938 0.0 28 0.0 0.0 0.0 42.9859555166949 0.0 29 0.0 0.0 0.0 43.17858899393409 0.0 30 0.0 0.0 0.0 43.360292912180995 0.0 31 0.0 0.0 0.0 43.509208153451006 0.0 32 0.0 0.0 0.0 43.69227826657195 0.0 33 0.0 0.0 0.0 43.834362533471776 0.0 34 0.0 0.0 0.0 43.954587682387015 0.0 35 0.0 0.0 0.0 44.09940433903492 0.0 36 0.0 0.0 0.0 44.24012241106071 0.0 37 0.0 0.0 0.0 44.37127711896825 0.0 38 0.0 0.0 0.0 44.52565713973441 0.0 39 0.0 0.0 0.0 44.68960052461883 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGACCGA 25 3.854977E-5 45.000004 8 TCCGGGA 35 1.1912016E-7 45.000004 4 GACCGAT 25 3.854977E-5 45.000004 9 ATTTGGG 25 3.854977E-5 45.000004 3 TGGGCAT 25 3.854977E-5 45.000004 6 CTATGGG 35 1.1912016E-7 45.000004 3 TTTGCGG 25 3.854977E-5 45.000004 2 ATGGGCT 20 6.9900084E-4 45.0 5 GCCTTGG 20 6.9900084E-4 45.0 2 GATACTG 20 6.9900084E-4 45.0 1 GCGATTT 20 6.9900084E-4 45.0 9 TCAGGGC 20 6.9900084E-4 45.0 4 GAAGCTA 20 6.9900084E-4 45.0 7 AGCTACG 20 6.9900084E-4 45.0 9 TCAACAT 20 6.9900084E-4 45.0 28 ACATCAA 20 6.9900084E-4 45.0 25 GCTACGA 20 6.9900084E-4 45.0 10 TTGGGTC 55 1.8189894E-12 45.0 5 GTGGGAC 20 6.9900084E-4 45.0 5 CGAATAT 20 6.9900084E-4 45.0 14 >>END_MODULE