##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933601.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1268952 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32803053228176 33.0 31.0 34.0 31.0 34.0 2 32.532686027525074 34.0 31.0 34.0 31.0 34.0 3 32.59619039963687 34.0 31.0 34.0 31.0 34.0 4 36.07870983299605 37.0 35.0 37.0 35.0 37.0 5 36.12587237342311 37.0 35.0 37.0 35.0 37.0 6 36.114127248311995 37.0 36.0 37.0 35.0 37.0 7 36.11892175590566 37.0 36.0 37.0 35.0 37.0 8 36.03176321878211 37.0 37.0 37.0 35.0 37.0 9 37.88275758263512 39.0 38.0 39.0 35.0 39.0 10 37.40338405235186 39.0 37.0 39.0 34.0 39.0 11 37.32140143992838 39.0 37.0 39.0 34.0 39.0 12 37.20357507612581 39.0 37.0 39.0 34.0 39.0 13 37.17564178944515 39.0 37.0 39.0 34.0 39.0 14 38.40361179934308 40.0 38.0 41.0 34.0 41.0 15 38.47356795213688 40.0 38.0 41.0 34.0 41.0 16 38.57238098840618 40.0 38.0 41.0 34.0 41.0 17 38.51954053423613 40.0 38.0 41.0 34.0 41.0 18 38.180493824825525 39.0 38.0 41.0 34.0 41.0 19 37.77115446447147 39.0 37.0 41.0 34.0 41.0 20 37.23479375106387 38.0 35.0 41.0 34.0 41.0 21 37.165858913497125 38.0 35.0 40.0 33.0 41.0 22 37.14597478864449 38.0 35.0 40.0 33.0 41.0 23 37.00654555885487 38.0 35.0 40.0 33.0 41.0 24 36.90373473543522 38.0 35.0 40.0 33.0 41.0 25 36.84206967639438 38.0 35.0 40.0 33.0 41.0 26 36.818069556610496 38.0 35.0 40.0 33.0 41.0 27 36.75267937636727 38.0 35.0 40.0 33.0 41.0 28 36.65599408015433 38.0 35.0 40.0 33.0 41.0 29 36.464673210649416 38.0 35.0 40.0 33.0 41.0 30 36.17394747791879 38.0 35.0 40.0 31.0 41.0 31 35.799550337601424 38.0 35.0 40.0 30.0 41.0 32 35.30365924006582 38.0 35.0 40.0 27.0 41.0 33 34.53637962665255 38.0 34.0 40.0 21.0 41.0 34 33.889329935253656 38.0 34.0 40.0 16.0 41.0 35 33.45193750433428 37.0 33.0 40.0 15.0 41.0 36 33.172692899337406 37.0 33.0 40.0 10.0 41.0 37 33.02520032278605 37.0 33.0 40.0 10.0 41.0 38 32.867234536846155 37.0 33.0 40.0 10.0 41.0 39 32.80856643907729 37.0 33.0 40.0 10.0 41.0 40 32.62804503243621 37.0 32.0 40.0 10.0 41.0 41 32.45699522125344 36.0 32.0 40.0 10.0 41.0 42 32.24994089610954 36.0 31.0 40.0 10.0 41.0 43 32.130764599448995 36.0 31.0 40.0 9.0 41.0 44 31.959541416854222 36.0 31.0 40.0 8.0 41.0 45 31.85120083344366 35.0 31.0 40.0 8.0 41.0 46 31.695379336649456 35.0 30.0 40.0 8.0 41.0 47 31.65490105220686 35.0 30.0 40.0 8.0 41.0 48 31.545046621148792 35.0 30.0 40.0 8.0 41.0 49 31.52186528726067 35.0 30.0 40.0 8.0 41.0 50 31.35083123711535 35.0 29.0 40.0 8.0 41.0 51 30.57559151173567 35.0 27.0 39.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 10.0 10 11.0 11 10.0 12 16.0 13 25.0 14 29.0 15 67.0 16 123.0 17 251.0 18 503.0 19 910.0 20 1766.0 21 2758.0 22 4199.0 23 7144.0 24 13359.0 25 26603.0 26 43857.0 27 50000.0 28 45107.0 29 38171.0 30 34252.0 31 34836.0 32 38803.0 33 48962.0 34 78184.0 35 90227.0 36 110571.0 37 134368.0 38 221128.0 39 242605.0 40 93.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.655309263076933 3.912756353274198 38.69184965231152 34.740084731337355 2 40.66465871049496 4.283534759392002 39.81009525971038 15.241711270402664 3 18.037482899274362 4.609788234700761 61.461899268057415 15.890829597967457 4 14.80071744242493 4.516010061846311 61.95648062338055 18.726791872348205 5 14.0816989137493 5.321635491334582 61.241875185192185 19.35479040972393 6 17.203645212742483 6.2535856360209054 63.04572592186308 13.497043229373531 7 65.03650256274469 1.9785618368543492 29.407495318971876 3.5774402814290847 8 66.11810375806178 2.4076560815539123 28.082543705356862 3.3916964550274558 9 61.39318114475567 4.141606617113966 29.811844734867826 4.653367503262535 10 31.60143173264237 18.2387513475687 36.062593384146915 14.097223535642009 11 24.268057420611655 19.024596675051537 40.91904185501106 15.788304049325744 12 19.87986937252158 18.27232235734685 44.937397159230606 16.910411110900963 13 19.085513084813293 17.564021334140296 47.21234530541739 16.138120275629024 14 17.056437122917178 18.023849601876194 48.282834969329016 16.636878305877605 15 16.559964443099503 17.416498023565904 48.758109053770355 17.26542847956424 16 18.61772549316286 17.440139579747697 46.68450816106519 17.25762676602425 17 18.270431032852308 18.490927946841175 45.781243104546114 17.457397915760406 18 19.504441460354684 17.210422458847933 45.73246269362434 17.552673387173037 19 18.7855805420536 20.482729055157325 43.507004205044794 17.22468619774428 20 20.024713306728703 21.40065187650912 42.339741771162345 16.234893045599833 21 19.585295582496425 22.37027090071177 42.37914436479867 15.665289151993141 22 18.858948171404435 19.47882977449108 43.33804588353224 18.32417617057225 23 17.63526122343477 21.412787875349107 42.62320402978206 18.328746871434063 24 17.388758597645932 20.983930046211363 43.4012476437249 18.226063712417805 25 18.16664460121423 21.956622472717644 41.35499215100335 18.521740775064778 26 17.564572970451206 20.745071523587967 42.65945441592747 19.03090109003335 27 17.677973634936546 19.831877013472536 43.223935972361446 19.266213379229473 28 16.659889420561218 21.379453281132776 42.49443635377855 19.46622094452745 29 18.067586480812516 20.53403123207182 42.131538466388015 19.266843820727654 30 19.376855862160273 20.196272199421255 42.72935461703831 17.69751732138016 31 19.217590578682252 21.91848076207768 40.253138022557195 18.610790636682868 32 19.045874075615153 22.011943714183044 39.216613394360074 19.725568815841736 33 19.185674477836827 23.042163927398356 36.677195039686296 21.09496655507852 34 17.744327602620114 23.889871326890223 37.02157370806776 21.344227362421904 35 17.492702639658553 26.341027871818635 35.38754814996942 20.77872133855339 36 18.233392594834164 27.995148752671493 32.41210069411609 21.359357958378254 37 17.970262074530794 27.67291434191364 31.742571823047683 22.614251760507884 38 18.234889893392342 27.835804664006204 31.974101463254716 21.955203979346734 39 18.76477597261362 26.1855452373297 31.31946677258084 23.73021201747584 40 20.19548414754853 25.71492065893745 32.09703755540005 21.992557638113972 41 18.23544152970325 26.58926421172747 31.844466930191214 23.330827328378064 42 19.149818117627778 26.781942894609095 32.52250676148507 21.545732226278062 43 19.15241868880777 25.198116240803436 33.931307094358175 21.718157976030614 44 19.96860401339058 25.46778759165043 33.152239012980786 21.411369381978197 45 19.755751202567158 24.970132834023666 32.78681935959752 22.48729660381165 46 19.668671470630883 25.693249232437477 32.927880644815566 21.710198652116077 47 18.339385571715873 27.088416267912418 33.84958611515644 20.722612045215264 48 18.507083010232066 26.515502556440275 33.879453281132776 21.097961152194884 49 19.60428763262913 25.272350727214267 33.53799040468039 21.585371235476202 50 18.36428801089403 25.105520145758074 33.75817209792017 22.772019745427723 51 18.14552481102516 24.699437015742124 33.25610424980614 23.898933923426576 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 873.0 1 2266.0 2 3659.0 3 49400.5 4 95142.0 5 61211.0 6 27280.0 7 25960.0 8 24640.0 9 24240.0 10 23840.0 11 23221.5 12 22603.0 13 21787.5 14 20972.0 15 19747.5 16 18523.0 17 17816.0 18 17109.0 19 16234.0 20 15359.0 21 14761.5 22 14164.0 23 13688.5 24 13213.0 25 13523.5 26 14136.0 27 14438.0 28 14898.5 29 15359.0 30 16553.5 31 17748.0 32 19869.5 33 21991.0 34 24187.5 35 26384.0 36 27846.0 37 29308.0 38 30954.5 39 32601.0 40 34932.0 41 37263.0 42 41332.5 43 45402.0 44 50460.5 45 55519.0 46 66004.0 47 76489.0 48 83798.0 49 91107.0 50 92691.0 51 94275.0 52 86774.0 53 79273.0 54 70744.5 55 62216.0 56 56638.0 57 51060.0 58 47923.5 59 44787.0 60 41755.5 61 38724.0 62 35645.5 63 32567.0 64 29368.0 65 26169.0 66 23182.0 67 20195.0 68 17204.5 69 14214.0 70 11853.5 71 9493.0 72 8333.5 73 7174.0 74 6663.5 75 5020.5 76 3888.0 77 2876.0 78 1864.0 79 1543.5 80 1223.0 81 828.5 82 434.0 83 369.5 84 305.0 85 186.5 86 68.0 87 45.0 88 22.0 89 21.5 90 21.0 91 13.0 92 5.0 93 2.5 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1268952.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.63789771812457 #Duplication Level Percentage of deduplicated Percentage of total 1 76.40067959811266 30.28362323505196 2 8.597389162364511 6.815648645214342 3 3.5692911223784747 4.244375893051441 4 2.1259030515313455 3.3706531086099347 5 1.3854450482676488 2.745806455865761 6 1.0684684234718422 2.5411105250773613 7 0.8660471368311675 2.402980148015192 8 0.7101427731245143 2.2518853285099873 9 0.6306881263232619 2.249923629891337 >10 4.487912700421619 30.199330509131705 >50 0.09459252124538231 2.573094817068302 >100 0.059224364976953145 4.202793362924684 >500 0.003412928864788712 0.9988536439324909 >1k 6.022815643744785E-4 0.3467976561709525 >5k 0.0 0.0 >10k+ 2.0076052145815955E-4 4.773123041484602 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 59981 4.7268139378006415 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCC 2010 0.15839842641802054 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.728311236358822E-4 0.0 0.0 0.07013661667265586 0.0 2 4.728311236358822E-4 0.0 0.0 0.23200247133067287 0.0 3 4.728311236358822E-4 0.0 0.0 0.40758042857413046 0.0 4 4.728311236358822E-4 0.0 0.0 0.6545558854866063 0.0 5 5.516363109085293E-4 0.0 0.0 1.2827120332368758 0.0 6 5.516363109085293E-4 0.0 0.0 2.3084403507776496 0.0 7 5.516363109085293E-4 0.0 0.0 3.2290425484967122 0.0 8 5.516363109085293E-4 0.0 0.0 4.566366576513532 0.0 9 6.304414981811762E-4 0.0 0.0 5.608407567819744 0.0 10 6.304414981811762E-4 0.0 0.0 6.960862191792913 0.0 11 6.304414981811762E-4 0.0 0.0 8.57290110264218 0.0 12 6.304414981811762E-4 0.0 0.0 9.84473802003543 0.0 13 6.304414981811762E-4 0.0 0.0 10.432230691153014 0.0 14 6.304414981811762E-4 0.0 0.0 10.776136528410847 0.0 15 6.304414981811762E-4 0.0 0.0 11.0456502688833 0.0 16 6.304414981811762E-4 0.0 0.0 11.424466804102913 0.0 17 6.304414981811762E-4 0.0 0.0 11.887210863767896 0.0 18 6.304414981811762E-4 0.0 0.0 12.354604429481967 0.0 19 6.304414981811762E-4 0.0 0.0 12.680306268479816 0.0 20 6.304414981811762E-4 0.0 0.0 12.98827694034132 0.0 21 6.304414981811762E-4 0.0 0.0 13.320283194320982 0.0 22 6.304414981811762E-4 0.0 0.0 13.673645654051532 0.0 23 6.304414981811762E-4 0.0 0.0 14.002893726476652 0.0 24 6.304414981811762E-4 0.0 0.0 14.269570480207289 0.0 25 6.304414981811762E-4 0.0 0.0 14.495189731368878 0.0 26 6.304414981811762E-4 0.0 0.0 14.713322489739564 0.0 27 6.304414981811762E-4 0.0 0.0 14.950841324179322 0.0 28 7.092466854538233E-4 0.0 0.0 15.183789457757268 0.0 29 7.092466854538233E-4 0.0 0.0 15.430449693920652 0.0 30 7.092466854538233E-4 0.0 0.0 15.722659328327628 0.0 31 7.880518727264703E-4 0.0 0.0 15.940161645200133 0.0 32 7.880518727264703E-4 0.0 0.0 16.239069720525283 0.0 33 7.880518727264703E-4 0.0 0.0 16.487306060434122 0.0 34 8.668570599991174E-4 0.0 0.0 16.73767014039932 0.0 35 8.668570599991174E-4 0.0 0.0 17.016955724093584 0.0 36 8.668570599991174E-4 0.0 0.0 17.258257207522426 0.0 37 9.456622472717644E-4 0.0 0.0 17.50988217048399 0.0 38 9.456622472717644E-4 0.0 0.0 17.834559542047295 0.0 39 9.456622472717644E-4 0.0 0.0 18.316610872594076 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTATCG 20 7.0335635E-4 45.000004 1 ACGTATA 20 7.0335635E-4 45.000004 12 CGTTTTT 29060 0.0 44.070885 1 CGAATAG 85 0.0 42.35294 26 GTTTTTT 32665 0.0 40.006123 2 GCTCGTA 90 0.0 40.0 32 GCGATAT 35 6.248805E-6 38.571426 9 TACGGGA 135 0.0 38.333336 4 TCGTAAC 95 0.0 37.894737 34 TTGGGAC 1575 0.0 37.142853 5 TGGGCGA 1990 0.0 37.085426 6 TCTGGGA 2080 0.0 36.12981 4 TTTGGGC 3300 0.0 35.727272 4 GGTTAAC 70 2.1827873E-11 35.357143 8 GGGCGAT 2885 0.0 35.251297 7 TGGGACT 1290 0.0 35.23256 6 GTTTGCG 160 0.0 35.156254 1 TGGGAAC 1255 0.0 35.139442 6 TATTGCG 45 8.700881E-7 35.0 1 TTGGGTA 900 0.0 35.0 5 >>END_MODULE