##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933600.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 392098 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.239355977332195 33.0 31.0 34.0 30.0 34.0 2 32.40404184668119 34.0 31.0 34.0 30.0 34.0 3 32.52845972180424 34.0 31.0 34.0 31.0 34.0 4 36.02915597631205 37.0 35.0 37.0 35.0 37.0 5 36.02118858040592 37.0 35.0 37.0 35.0 37.0 6 35.97999224683625 37.0 35.0 37.0 35.0 37.0 7 36.02586598248397 37.0 35.0 37.0 35.0 37.0 8 35.887275630072075 37.0 35.0 37.0 35.0 37.0 9 37.72470912884024 39.0 38.0 39.0 35.0 39.0 10 37.22735387581676 39.0 37.0 39.0 34.0 39.0 11 37.14919994491173 39.0 37.0 39.0 34.0 39.0 12 36.97526638748476 39.0 37.0 39.0 33.0 39.0 13 36.883416900876824 39.0 37.0 39.0 33.0 39.0 14 37.859338736744384 40.0 37.0 41.0 33.0 41.0 15 37.999581737218755 40.0 37.0 41.0 33.0 41.0 16 38.118840187912205 40.0 37.0 41.0 33.0 41.0 17 38.058171681569405 40.0 37.0 41.0 33.0 41.0 18 37.85692862498661 39.0 37.0 41.0 33.0 41.0 19 37.62679483190427 39.0 37.0 41.0 33.0 41.0 20 37.32142219547154 39.0 35.0 41.0 33.0 41.0 21 37.188396778356434 39.0 35.0 41.0 33.0 41.0 22 37.22265096991058 39.0 35.0 41.0 33.0 41.0 23 37.14436951986493 39.0 35.0 40.0 33.0 41.0 24 37.03549877836663 39.0 35.0 40.0 33.0 41.0 25 36.93766609368066 38.0 35.0 40.0 33.0 41.0 26 36.869563221439535 38.0 35.0 40.0 32.0 41.0 27 36.788438094557996 38.0 35.0 40.0 32.0 41.0 28 36.63209197700575 38.0 35.0 40.0 32.0 41.0 29 36.47904350443002 38.0 35.0 40.0 31.0 41.0 30 36.335640579651006 38.0 35.0 40.0 31.0 41.0 31 36.09879162862346 38.0 35.0 40.0 30.0 41.0 32 35.788835954276735 38.0 35.0 40.0 30.0 41.0 33 35.45674040673505 38.0 35.0 40.0 27.0 41.0 34 35.119130931552824 38.0 35.0 40.0 24.0 41.0 35 34.85973659646313 38.0 34.0 40.0 23.0 41.0 36 34.69487730108289 38.0 34.0 40.0 23.0 41.0 37 34.577353110701914 38.0 34.0 40.0 22.0 41.0 38 34.455539176430385 38.0 34.0 40.0 21.0 41.0 39 34.33606139281506 37.0 34.0 40.0 21.0 41.0 40 34.16775653025519 37.0 33.0 40.0 21.0 41.0 41 34.03163749878857 37.0 33.0 40.0 20.0 41.0 42 33.92522787670429 37.0 33.0 40.0 19.0 41.0 43 33.798111696565655 37.0 33.0 40.0 18.0 41.0 44 33.6911741452392 36.0 33.0 40.0 18.0 41.0 45 33.652117582849186 36.0 33.0 40.0 20.0 41.0 46 33.491244535804825 36.0 33.0 40.0 20.0 41.0 47 33.339361588174384 35.0 33.0 40.0 18.0 41.0 48 33.24084540089468 35.0 33.0 40.0 18.0 41.0 49 33.227812944723006 35.0 33.0 40.0 18.0 41.0 50 33.118778978724706 35.0 33.0 40.0 18.0 41.0 51 32.07955409106907 35.0 31.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 2.0 10 6.0 11 6.0 12 10.0 13 15.0 14 24.0 15 20.0 16 40.0 17 82.0 18 181.0 19 298.0 20 476.0 21 782.0 22 1202.0 23 1993.0 24 3257.0 25 5424.0 26 7969.0 27 9072.0 28 9185.0 29 8955.0 30 9283.0 31 10544.0 32 12837.0 33 17776.0 34 28692.0 35 31195.0 36 37899.0 37 50195.0 38 74925.0 39 69730.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.860631780830303 5.333360537416667 37.58575662206897 30.22025105968406 2 32.915750654173195 5.1165779983575534 46.18488235084086 15.782788996628394 3 21.68820039887987 5.226244459293341 55.70163581553591 17.383919326290876 4 16.847063744268016 5.580747670225301 56.637626307708786 20.934562277797898 5 15.627980759912063 6.34815785849456 56.63507592489633 21.38878545669705 6 19.728231207504248 7.173461736606665 58.235696177996324 14.86261087789277 7 72.83000678401828 3.070405867920775 20.12099016062311 3.9785971874378343 8 73.74763451994144 3.235925712449439 18.844523562986804 4.171916204622314 9 68.62748598564644 5.2958699100735025 20.918239827798153 5.1584042764819 10 36.67501491973945 21.77338318481604 26.705313467551477 14.846288427893025 11 28.298027533932846 19.982249335625276 32.76400287683181 18.955720253610068 12 23.704533050410866 18.675433182520695 38.1312835056542 19.48875026141424 13 22.83587266448694 18.43340185361823 40.42229238608715 18.30843309580768 14 19.727976169223 19.414024045009157 42.34298568215089 18.515014103616952 15 17.89501604190789 18.061811077842783 42.9089156282358 21.134257252013526 16 21.092430973889183 18.229116190340168 39.54547077516335 21.132982060607297 17 21.046014006702407 19.128126131732373 38.01371085799979 21.812149003565434 18 22.738193002769716 17.627990961443313 39.09813362985784 20.53568240592913 19 21.633622206693225 21.19036567388765 36.884911425204926 20.2911006942142 20 23.104427974638995 23.89504664650164 34.85965243383032 18.14087294502905 21 21.794806400440706 24.15671592306005 36.024667302562115 18.023810373937128 22 21.1102836535764 20.68487980045805 36.734693877551024 21.47014266841453 23 19.53414707547603 22.916209723079433 35.98947201975016 21.560171181694372 24 19.563731516100567 22.998077011359406 36.26210794240215 21.176083530137873 25 20.973073058266046 23.71728496447317 33.281730587761224 22.027911389499565 26 20.12940642390423 22.4000122418375 34.14248478696653 23.32809654729175 27 19.772352830159807 21.199036975450014 36.125407423654295 22.903202770735888 28 18.523685405179318 22.929216675422982 34.87316946273636 23.673928456661343 29 20.30461772312024 22.65556059964601 33.8014986049406 23.238323072293152 30 23.250054833230468 21.05417523170228 34.79257736586261 20.903192569204638 31 23.49846211916409 23.407158414478012 31.17613453779412 21.918244928563777 32 23.785125147284607 22.62648623558396 30.257996725308466 23.330391891822963 33 24.47933934883626 22.564001856678686 28.562247193303712 24.394411601181336 34 22.672138087927 23.451024998852326 30.96572795576616 22.911108957454516 35 21.72798637075425 25.29826726991721 29.579594897194067 23.394151462134467 36 23.04984978245235 27.859616728470943 26.579324556615948 22.511208932460764 37 23.50585822932022 27.231457441762007 27.428346994883935 21.834337334033837 38 24.7134644910201 27.77800447847222 27.584430423006495 19.924100607501185 39 23.546154277757093 26.745354477707107 27.46175700972716 22.246734234808645 40 23.76523216134742 25.8014577988156 30.280440094058118 20.15286994577886 41 19.86697203250208 27.369943228478594 29.241924212824344 23.521160526194983 42 21.258460894980335 27.647169840193015 29.198567705012522 21.895801559814128 43 21.57394324888166 24.813694535549786 31.123851690138686 22.488510525429867 44 22.911619034017004 23.524731062132425 30.44468474718055 23.118965156670015 45 23.322230666823092 23.21409443557478 29.07589429173319 24.38778060586894 46 22.44999974496172 24.089640855092348 30.559451973741258 22.90090742620467 47 20.119204892654388 27.08685073629552 31.73007768466047 21.063866686389627 48 20.332671934057302 26.914699896454458 31.561497380756855 21.19113078873139 49 23.160026319950624 24.15748103790379 31.29498237685477 21.38751026529082 50 21.267642273105192 24.188340669934558 30.834893317486955 23.709123739473295 51 19.916449459063806 23.595121627756328 29.98638095578146 26.502047957398407 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 872.0 1 1377.5 2 1883.0 3 10651.5 4 19420.0 5 11916.5 6 4413.0 7 4301.0 8 4189.0 9 4301.0 10 4413.0 11 4315.0 12 4217.0 13 4116.5 14 4016.0 15 3752.5 16 3489.0 17 3266.0 18 3043.0 19 2877.5 20 2712.0 21 2665.0 22 2618.0 23 2599.5 24 2581.0 25 2628.5 26 2712.5 27 2749.0 28 3060.5 29 3372.0 30 3779.5 31 4187.0 32 4881.0 33 5575.0 34 6219.0 35 6863.0 36 7348.0 37 7833.0 38 8359.0 39 8885.0 40 9563.5 41 10242.0 42 11505.5 43 12769.0 44 14603.0 45 16437.0 46 19786.5 47 23136.0 48 27048.5 49 30961.0 50 32693.5 51 34426.0 52 32743.5 53 31061.0 54 27914.5 55 24768.0 56 23162.5 57 21557.0 58 20423.0 59 19289.0 60 18031.5 61 16774.0 62 15088.5 63 13403.0 64 12329.5 65 11256.0 66 9493.5 67 7731.0 68 7017.0 69 6303.0 70 5254.5 71 4206.0 72 3603.5 73 3001.0 74 2593.0 75 1748.0 76 1311.0 77 1012.5 78 714.0 79 507.5 80 301.0 81 219.0 82 137.0 83 108.0 84 79.0 85 52.5 86 26.0 87 19.5 88 13.0 89 8.0 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 392098.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.19630269034272 #Duplication Level Percentage of deduplicated Percentage of total 1 70.79002679133033 29.870773979444454 2 10.010980158597842 8.448526979984196 3 5.031999353387118 6.369953035593949 4 3.316273002200698 5.5973783761868905 5 2.294966458039054 4.841954966379982 6 1.7008380502206617 4.306144631661802 7 1.3163452235001036 3.8881431047058053 8 1.0540740744714567 3.5582422963552354 9 0.8387763498824995 3.185393467422848 >10 3.554881705486689 22.640703710810513 >50 0.0635871830184868 1.800006332388809 >100 0.02543487320739472 2.0233461300191067 >500 0.0012111844384473675 0.3605634490347259 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 6.055922192236838E-4 3.1088695400116766 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12166 3.102795729639019 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCC 787 0.20071512734061384 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 624 0.15914388749751338 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 458 0.11680753281067488 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGC 439 0.11196180546700059 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 436 0.11119669062326254 No Hit CTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGCT 422 0.10762615468581833 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11476722656070676 0.0 2 0.0 0.0 0.0 0.38893337890017293 0.0 3 0.0 0.0 0.0 0.5687353671786135 0.0 4 0.0 0.0 0.0 0.8625394671740229 0.0 5 0.0 0.0 0.0 1.5723110038816825 0.0 6 0.0 0.0 0.0 2.542986702304016 0.0 7 0.0 0.0 0.0 3.466480318695836 0.0 8 0.0 0.0 0.0 4.81665297961224 0.0 9 0.0 0.0 0.0 5.730455141316711 0.0 10 0.0 0.0 0.0 7.076292151451933 0.0 11 0.0 0.0 0.0 9.40096608500936 0.0 12 0.0 0.0 0.0 11.4048018607593 0.0 13 0.0 0.0 0.0 12.16507097715367 0.0 14 0.0 0.0 0.0 12.536151676366623 0.0 15 0.0 0.0 0.0 12.895245576361011 0.0 16 0.0 0.0 0.0 13.5647210646318 0.0 17 0.0 0.0 0.0 14.344883166963362 0.0 18 0.0 0.0 0.0 15.101326709139041 0.0 19 0.0 0.0 0.0 15.574932797412892 0.0 20 0.0 0.0 0.0 16.038847430999393 0.0 21 0.0 0.0 0.0 16.585649505990848 0.0 22 2.5503828124601505E-4 0.0 0.0 17.076853235670676 0.0 23 2.5503828124601505E-4 0.0 0.0 17.475478069258195 0.0 24 2.5503828124601505E-4 0.0 0.0 17.760355829409995 0.0 25 5.100765624920301E-4 0.0 0.0 17.949084157532045 0.0 26 5.100765624920301E-4 0.0 0.0 18.131946605185437 0.0 27 5.100765624920301E-4 0.0 0.0 18.330111349713594 0.0 28 5.100765624920301E-4 0.0 0.0 18.50557768721085 0.0 29 5.100765624920301E-4 0.0 0.0 18.708588159082677 0.0 30 5.100765624920301E-4 0.0 0.0 18.97612331610975 0.0 31 5.100765624920301E-4 0.0 0.0 19.15133461532576 0.0 32 5.100765624920301E-4 0.0 0.0 19.469877428602032 0.0 33 5.100765624920301E-4 0.0 0.0 19.684619661411176 0.0 34 7.65114843738045E-4 0.0 0.0 19.901657238751536 0.0 35 7.65114843738045E-4 0.0 0.0 20.185769884059596 0.0 36 7.65114843738045E-4 0.0 0.0 20.40586792077491 0.0 37 7.65114843738045E-4 0.0 0.0 20.60989854577172 0.0 38 7.65114843738045E-4 0.0 0.0 20.92538089967304 0.0 39 7.65114843738045E-4 0.0 0.0 21.58720523950645 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCAT 35 1.2091914E-7 45.000004 17 ATCAACC 55 1.8189894E-12 45.000004 10 CACAACG 30 2.161829E-6 45.000004 12 CGTTTTT 4900 0.0 43.484695 1 TGGGACG 65 0.0 41.538464 6 ACCTTCT 45 1.9226718E-8 40.000004 19 ATCTACC 40 3.4504592E-7 39.375004 15 TGGGAAC 390 0.0 39.23077 6 TTGGGAC 635 0.0 38.97638 5 CATATGC 110 0.0 38.86364 33 GTTTTTT 5775 0.0 38.727272 2 TACTCCC 35 6.2377603E-6 38.57143 25 TGTTATC 65 9.094947E-12 38.076927 24 CGGGATA 65 9.094947E-12 38.076927 6 GTTATCT 65 9.094947E-12 38.076927 25 TTTGGGC 1020 0.0 37.72059 4 TTTGGGA 1440 0.0 37.656254 4 GGCCGAT 180 0.0 37.500004 8 TAGCCGT 30 1.13855014E-4 37.500004 44 GACTAAT 330 0.0 37.5 9 >>END_MODULE