##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933599.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 398420 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.154854173987246 33.0 31.0 34.0 30.0 34.0 2 32.330947241604335 34.0 31.0 34.0 30.0 34.0 3 32.468718939812256 34.0 31.0 34.0 31.0 34.0 4 35.94139601425631 37.0 35.0 37.0 35.0 37.0 5 35.97265950504493 37.0 35.0 37.0 35.0 37.0 6 35.951101852316654 37.0 35.0 37.0 35.0 37.0 7 35.940876462024995 37.0 35.0 37.0 35.0 37.0 8 35.83205913357763 37.0 35.0 37.0 35.0 37.0 9 37.68014406907284 39.0 38.0 39.0 35.0 39.0 10 37.22257918779178 39.0 37.0 39.0 34.0 39.0 11 37.138509612971234 39.0 37.0 39.0 34.0 39.0 12 36.939932734300484 39.0 37.0 39.0 33.0 39.0 13 36.86227348024698 39.0 37.0 39.0 33.0 39.0 14 37.87804076100598 40.0 37.0 41.0 33.0 41.0 15 37.98580141559159 40.0 37.0 41.0 33.0 41.0 16 38.149342402489836 40.0 37.0 41.0 33.0 41.0 17 38.136973545504745 40.0 37.0 41.0 33.0 41.0 18 37.97895938958887 39.0 37.0 41.0 33.0 41.0 19 37.77060639526128 39.0 37.0 41.0 34.0 41.0 20 37.43419507052859 39.0 35.0 41.0 33.0 41.0 21 37.33753074644847 39.0 35.0 41.0 33.0 41.0 22 37.34366999648612 39.0 35.0 41.0 33.0 41.0 23 37.218846945434464 39.0 35.0 41.0 33.0 41.0 24 37.124976155815474 39.0 35.0 41.0 33.0 41.0 25 37.01853069625019 39.0 35.0 41.0 33.0 41.0 26 36.985954520355406 39.0 35.0 41.0 33.0 41.0 27 36.90314241252949 38.0 35.0 40.0 33.0 41.0 28 36.821304151398024 38.0 35.0 40.0 33.0 41.0 29 36.61663320114452 38.0 35.0 40.0 32.0 41.0 30 36.38356006224587 38.0 35.0 40.0 31.0 41.0 31 36.15081321218814 38.0 35.0 40.0 30.0 41.0 32 35.92964459615481 38.0 35.0 40.0 30.0 41.0 33 35.54324833090708 38.0 35.0 40.0 27.0 41.0 34 35.217047336981075 38.0 35.0 40.0 24.0 41.0 35 35.014467145223634 38.0 34.0 40.0 23.0 41.0 36 34.83932031524522 38.0 34.0 40.0 23.0 41.0 37 34.75761758947844 38.0 34.0 40.0 23.0 41.0 38 34.6148612017469 38.0 34.0 40.0 22.0 41.0 39 34.549028663219715 38.0 34.0 40.0 22.0 41.0 40 34.388308819838365 37.0 34.0 40.0 21.0 41.0 41 34.26054414939009 37.0 34.0 40.0 21.0 41.0 42 34.085603132372874 37.0 33.0 40.0 20.0 41.0 43 33.994681491892976 37.0 33.0 40.0 20.0 41.0 44 33.876414336629686 37.0 33.0 40.0 18.0 41.0 45 33.807738065358166 36.0 33.0 40.0 20.0 41.0 46 33.63712163044024 36.0 33.0 40.0 20.0 41.0 47 33.57016465036896 36.0 33.0 40.0 20.0 41.0 48 33.41483359269113 35.0 33.0 40.0 19.0 41.0 49 33.39451081773004 35.0 33.0 40.0 20.0 41.0 50 33.232889915164904 35.0 33.0 40.0 18.0 41.0 51 32.32996586516741 35.0 31.0 39.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 6.0 10 10.0 11 9.0 12 15.0 13 17.0 14 27.0 15 34.0 16 62.0 17 90.0 18 162.0 19 308.0 20 441.0 21 797.0 22 1288.0 23 1961.0 24 3176.0 25 5335.0 26 7894.0 27 9076.0 28 9216.0 29 8771.0 30 9156.0 31 10391.0 32 12716.0 33 17301.0 34 28824.0 35 31039.0 36 37707.0 37 49232.0 38 76213.0 39 77113.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.892726268761606 5.524823051051654 37.535515285377244 30.0469353948095 2 33.10501480849355 5.149841875407861 45.894031424125295 15.851111891973293 3 21.82044074092666 5.27282766929371 55.34787410270569 17.558857487073944 4 17.121881431655037 5.647557853521409 56.339290196275286 20.891270518548268 5 15.775814467145224 6.338537222027006 56.4710606897244 21.414587621103358 6 19.839114502284023 7.2872847748607 58.06887204457608 14.804728678279202 7 72.78600471863862 3.104763817077456 19.95155865669394 4.1576728075899805 8 73.65016816424878 3.2681592289543695 18.843682546056925 4.237990060739922 9 68.55353646905276 5.300436725064003 20.775312484313034 5.370714321570203 10 36.72280508006626 21.807389187289793 26.72757391697204 14.742231815671905 11 28.477486069976404 19.92520455800412 32.556347572913005 19.04096179910647 12 23.8758094473169 18.733999297224035 37.89368003614276 19.496511219316297 13 23.00788113046534 18.5128758596456 40.17619597409768 18.303047035791376 14 20.04141358365544 19.46262737814367 42.04332111841775 18.452637919783143 15 18.06862105315998 18.082927563877316 42.65674413935044 21.191707243612267 16 21.196225089101954 18.35098639626525 39.43828121078259 21.01450730385021 17 21.179408664223683 19.006575975101654 38.04753777420812 21.766477586466543 18 22.876110637016215 17.636162843230764 38.74278399678731 20.744942522965715 19 21.684905376236134 21.06470558706892 36.88820842327193 20.36218061342302 20 23.417750112946138 23.84117263189599 34.576577481050144 18.164499774107725 21 21.901008985492695 24.17398724963606 35.76226093067617 18.16274283419507 22 21.373676020280104 20.463832136940916 36.54209126047889 21.620400582300086 23 19.82957682847247 22.790522564128306 35.80442748857989 21.575473118819335 24 19.828070879975904 22.918277194919934 36.060689724411425 21.192962200692737 25 21.093820591335778 23.644144370262538 33.200893529441295 22.061141508960393 26 20.372471261482858 22.37739069323829 34.01134481200743 23.23879323327142 27 19.996737111590786 21.168114050499472 35.94498268159229 22.890166156317456 28 18.641634456101603 22.81386476582501 34.85442497866573 23.690075799407662 29 20.486923347221524 22.606294864715625 33.6609607951408 23.24582099292204 30 23.34395863661463 21.104362230811706 34.720395562471765 20.831283570101903 31 23.701119421715777 23.40394558506099 30.963054063551027 21.931880929672204 32 23.8484513829627 22.537272225289897 30.16163847196426 23.452637919783143 33 24.501782039054266 22.490838813312585 28.653682044074092 24.353697103559057 34 22.802319160684707 23.391145022840217 30.96255208071884 22.843983735756236 35 21.809899101450732 25.25952512424075 29.574318558305308 23.35625721600321 36 23.04603182571156 27.84624265850108 26.661312183123336 22.446413332664022 37 23.541488881080266 27.122132423071132 27.4122785000753 21.924100195773306 38 24.75955022338236 27.653230259525124 27.630390040660608 19.956829476431906 39 23.61979820290146 26.479343406455495 27.64595150845841 22.25490688218463 40 23.71818683801014 25.892525475628737 30.18121580241956 20.20807188394157 41 20.038401686662315 27.226795843582153 29.195823502836205 23.53897896691933 42 21.259725917373625 27.566136238140654 29.235982129411177 21.938155715074544 43 21.63244817027258 24.75879724913408 31.0305707544802 22.578183826113147 44 22.94187038803273 23.4074594648863 30.49144119271121 23.15922895436976 45 23.26263741780031 23.26514733196125 29.05878218964911 24.41343306058933 46 22.524973645901312 23.99804226695447 30.62722754881783 22.84975653832639 47 20.241955725114202 27.019727925304952 31.74589629034687 20.992420059233975 48 20.470106922343255 26.85156367652226 31.491641985844083 21.186687415290397 49 23.212941117413784 24.203604236735103 31.28457406756689 21.298880578284223 50 21.328497565383266 24.252045580041163 30.771045630239446 23.648411224336126 51 20.12725264795944 23.57487073942071 29.94904874253301 26.348827870086843 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 721.0 1 1257.0 2 1793.0 3 10610.5 4 19428.0 5 12148.0 6 4868.0 7 4556.0 8 4244.0 9 4368.0 10 4492.0 11 4446.5 12 4401.0 13 4153.5 14 3906.0 15 3682.5 16 3459.0 17 3209.5 18 2960.0 19 2843.0 20 2726.0 21 2709.5 22 2693.0 23 2627.5 24 2562.0 25 2618.0 26 2808.5 27 2943.0 28 3189.5 29 3436.0 30 3778.0 31 4120.0 32 4865.0 33 5610.0 34 6233.0 35 6856.0 36 7285.0 37 7714.0 38 8380.5 39 9047.0 40 9661.0 41 10275.0 42 11598.0 43 12921.0 44 14928.5 45 16936.0 46 20265.5 47 23595.0 48 27524.5 49 31454.0 50 33052.5 51 34651.0 52 32963.0 53 31275.0 54 28179.5 55 25084.0 56 23552.0 57 22020.0 58 20957.5 59 19895.0 60 18439.0 61 16983.0 62 15453.5 63 13924.0 64 12763.5 65 11603.0 66 9815.0 67 8027.0 68 7298.5 69 6570.0 70 5396.0 71 4222.0 72 3699.0 73 3176.0 74 2785.0 75 1923.5 76 1453.0 77 1083.0 78 713.0 79 521.0 80 329.0 81 238.0 82 147.0 83 106.5 84 66.0 85 46.0 86 26.0 87 24.0 88 22.0 89 11.5 90 1.0 91 1.5 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 398420.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.31833842884266 #Duplication Level Percentage of deduplicated Percentage of total 1 70.64114302556703 29.894157975562237 2 10.21468104327676 8.64536658664139 3 5.095090756909863 6.468473249297389 4 3.2346122704931672 5.47533666995268 5 2.2618020236229897 4.785785174735943 6 1.7223295036267887 4.373167369227542 7 1.3741359107181317 4.0705803961897065 8 1.0211279294443187 3.456994983789443 9 0.8698102682333034 3.3128032769981415 >10 3.477249396012466 22.37337729893824 >50 0.05987610346616032 1.6685449729702828 >100 0.026944246559772136 2.20065498712937 >500 5.98761034661603E-4 0.2120838485005507 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 5.98761034661603E-4 3.0626732100670924 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12087 3.033733246322976 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCC 837 0.21007981527031774 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 487 0.1222328196375684 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGC 442 0.11093820591335778 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 433 0.10867928316851563 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 422 0.10591837759148637 No Hit CTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGCT 417 0.10466342051101851 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11194217157773204 0.0 2 0.0 0.0 0.0 0.36770242457707947 0.0 3 0.0 0.0 0.0 0.5592088750564731 0.0 4 0.0 0.0 0.0 0.8292756387731539 0.0 5 0.0 0.0 0.0 1.529039706842026 0.0 6 0.0 0.0 0.0 2.476783294011345 0.0 7 0.0 0.0 0.0 3.3778424777872598 0.0 8 0.0 0.0 0.0 4.690527583956628 0.0 9 2.509914160935696E-4 0.0 0.0 5.581547111088801 0.0 10 2.509914160935696E-4 0.0 0.0 6.8794237237086495 0.0 11 2.509914160935696E-4 0.0 0.0 9.152150996435921 0.0 12 2.509914160935696E-4 0.0 0.0 11.124943526931379 0.0 13 5.019828321871392E-4 0.0 0.0 11.837006174388836 0.0 14 5.019828321871392E-4 0.0 0.0 12.180111440188746 0.0 15 5.019828321871392E-4 0.0 0.0 12.523216705988656 0.0 16 5.019828321871392E-4 0.0 0.0 13.18934792430099 0.0 17 5.019828321871392E-4 0.0 0.0 13.934541438682798 0.0 18 5.019828321871392E-4 0.0 0.0 14.668942322172581 0.0 19 5.019828321871392E-4 0.0 0.0 15.108930274584608 0.0 20 7.529742482807088E-4 0.0 0.0 15.574770342854274 0.0 21 7.529742482807088E-4 0.0 0.0 16.090055720094373 0.0 22 7.529742482807088E-4 0.0 0.0 16.569951307665278 0.0 23 7.529742482807088E-4 0.0 0.0 16.955474122785002 0.0 24 0.0010039656643742784 0.0 0.0 17.222528989508557 0.0 25 0.0010039656643742784 0.0 0.0 17.416545354148887 0.0 26 0.0010039656643742784 0.0 0.0 17.586968525676422 0.0 27 0.0010039656643742784 0.0 0.0 17.782490838813313 0.0 28 0.0010039656643742784 0.0 0.0 17.950906079012096 0.0 29 0.0010039656643742784 0.0 0.0 18.14517343506852 0.0 30 0.0010039656643742784 0.0 0.0 18.396666833994278 0.0 31 0.0010039656643742784 0.0 0.0 18.57963957632649 0.0 32 0.0010039656643742784 0.0 0.0 18.88559811254455 0.0 33 0.0010039656643742784 0.0 0.0 19.09366999648612 0.0 34 0.0010039656643742784 0.0 0.0 19.308518648662215 0.0 35 0.0010039656643742784 0.0 0.0 19.57180864414437 0.0 36 0.0010039656643742784 0.0 0.0 19.802720746950456 0.0 37 0.0010039656643742784 0.0 0.0 20.002258922744844 0.0 38 0.0010039656643742784 0.0 0.0 20.324280909592893 0.0 39 0.0010039656643742784 0.0 0.0 20.98790221374429 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTGT 20 7.027731E-4 45.000004 25 GCGTTAG 20 7.027731E-4 45.000004 1 GTTACGT 20 7.027731E-4 45.000004 22 TTACGTT 20 7.027731E-4 45.000004 23 TATCCGG 25 3.8862017E-5 45.0 2 CGTTTTT 4540 0.0 43.56278 1 TTTGTCG 65 0.0 41.53846 1 CGGGTAC 60 3.6379788E-12 41.250004 6 GCGATCT 95 0.0 40.263157 9 GCTACGA 95 0.0 40.263157 10 AGCTACG 95 0.0 40.263157 9 TGGGCGA 605 0.0 40.16529 6 CGATGCG 45 1.9228537E-8 40.0 10 AACACGT 175 0.0 39.857143 41 AAACACG 195 0.0 39.23077 40 ACACGCG 495 0.0 39.090908 36 TTTGGGC 1135 0.0 39.052868 4 CACGTGA 180 0.0 38.75 43 TTACGGG 70 0.0 38.571426 3 TTGGGAT 605 0.0 38.305786 5 >>END_MODULE