##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933598.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 241018 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1684894904115 33.0 31.0 34.0 30.0 34.0 2 32.35467890365035 34.0 31.0 34.0 30.0 34.0 3 32.43071056933507 34.0 31.0 34.0 31.0 34.0 4 35.99016256047266 37.0 35.0 37.0 35.0 37.0 5 36.024666207503174 37.0 35.0 37.0 35.0 37.0 6 35.99332000099577 37.0 35.0 37.0 35.0 37.0 7 36.064746201528514 37.0 35.0 37.0 35.0 37.0 8 35.92439153922113 37.0 35.0 37.0 35.0 37.0 9 37.73995718162129 39.0 38.0 39.0 35.0 39.0 10 37.107029350504945 39.0 37.0 39.0 33.0 39.0 11 37.10422872980441 39.0 37.0 39.0 34.0 39.0 12 37.165688869710976 39.0 37.0 39.0 34.0 39.0 13 37.134662141416825 39.0 37.0 39.0 33.0 39.0 14 38.22841862433511 40.0 38.0 41.0 33.0 41.0 15 38.27663079106125 40.0 38.0 41.0 33.0 41.0 16 38.3611970890141 40.0 38.0 41.0 34.0 41.0 17 38.35111070542449 40.0 38.0 41.0 34.0 41.0 18 38.03211793310043 39.0 37.0 40.0 34.0 41.0 19 37.64703881037931 39.0 37.0 40.0 34.0 41.0 20 37.175414284410294 38.0 35.0 40.0 33.0 41.0 21 37.05983785443411 38.0 35.0 40.0 33.0 41.0 22 37.07790704428715 38.0 35.0 40.0 33.0 41.0 23 37.00178824818063 38.0 35.0 40.0 33.0 41.0 24 36.89575882299248 38.0 35.0 40.0 33.0 41.0 25 36.815071903343316 38.0 35.0 40.0 33.0 41.0 26 36.74767029848393 38.0 35.0 40.0 33.0 41.0 27 36.68851289115336 38.0 35.0 40.0 33.0 41.0 28 36.57117725647047 38.0 35.0 40.0 32.0 41.0 29 36.46862060095096 38.0 35.0 40.0 32.0 41.0 30 36.2867586653279 38.0 35.0 40.0 31.0 41.0 31 35.898376884714004 38.0 35.0 40.0 30.0 41.0 32 35.36279862914803 38.0 35.0 40.0 27.0 41.0 33 34.75859479374984 38.0 35.0 40.0 21.0 41.0 34 34.26020878108689 38.0 34.0 40.0 18.0 41.0 35 33.88444016629463 38.0 34.0 40.0 15.0 41.0 36 33.63311453916305 38.0 33.0 40.0 12.0 41.0 37 33.41283638566414 38.0 33.0 40.0 10.0 41.0 38 33.30408517206184 38.0 33.0 40.0 10.0 41.0 39 33.25084433527786 38.0 33.0 40.0 10.0 41.0 40 33.100743512932645 38.0 33.0 40.0 10.0 41.0 41 32.89990374162926 37.0 32.0 40.0 10.0 41.0 42 32.675202681957366 37.0 32.0 40.0 10.0 41.0 43 32.49160228696612 37.0 31.0 40.0 10.0 41.0 44 32.42558647072003 37.0 31.0 40.0 10.0 41.0 45 32.410234920213426 37.0 31.0 40.0 10.0 41.0 46 32.148532474752926 36.0 31.0 40.0 9.0 41.0 47 31.88987544498751 36.0 30.0 40.0 8.0 41.0 48 31.75822137765644 36.0 30.0 40.0 8.0 41.0 49 31.744475516351475 36.0 30.0 40.0 8.0 41.0 50 31.640624351708173 36.0 30.0 40.0 8.0 41.0 51 30.62327709963571 35.0 27.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 5.0 13 3.0 14 8.0 15 7.0 16 16.0 17 39.0 18 101.0 19 187.0 20 329.0 21 524.0 22 922.0 23 1574.0 24 2874.0 25 5346.0 26 8099.0 27 8379.0 28 7157.0 29 6413.0 30 5951.0 31 6311.0 32 7281.0 33 9534.0 34 14034.0 35 17560.0 36 22413.0 37 28768.0 38 47239.0 39 39932.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.572928163041766 4.9527421188458955 39.699109610070614 31.775220108041722 2 40.259233750176335 4.620401795716503 39.19997676522085 15.920387688886306 3 18.20776871436988 4.834078782497573 59.36735015641985 17.590802346712696 4 14.299346936743316 4.8830377814105175 60.002987328747224 20.814627953098938 5 13.092383141508105 6.082533254777651 60.43988415802969 20.385199445684556 6 16.782563957878665 6.742235019791052 63.782788007534705 12.692413014795575 7 64.42589350173016 2.3840543029981163 29.115252802695235 4.074799392576487 8 64.48688479698612 2.3736816337368993 28.172999527006283 4.966434042270702 9 59.471491755802475 4.774332207552963 30.429262544706205 5.324913491938362 10 27.67428158892697 19.69230513903526 37.27024537586404 15.36316789617373 11 20.018421860607923 20.29848393066078 41.48569816362264 18.197396045108665 12 17.06677509563601 18.626409645752602 46.27164776074816 18.03516749786323 13 19.618866640665843 19.234662971230364 47.594785451709 13.551684936394793 14 17.55719489830635 20.021741114771512 47.47736683567202 14.943697151250115 15 14.405563069978175 19.787318789468006 48.43746110249027 17.369657038063547 16 15.131649918263365 19.05334871254429 46.63801043905435 19.176990930138 17 14.760723265482245 19.07575367814852 45.28997834186658 20.87354471450265 18 16.37678513637986 17.828543926179787 47.49894198773536 18.295728949705 19 16.21497149590487 21.48719182799625 46.33969247110174 15.958144204997138 20 17.150586263266643 23.51484121517895 43.984681642035035 15.349890879519373 21 15.412126895086676 24.600237326672698 45.057630550415325 14.930005227825308 22 14.159523355102108 22.550182973885768 43.57309412574995 19.71719954526218 23 13.2662290783261 23.622716975495607 42.368619771137425 20.74243417504087 24 13.91348364022604 23.80444614095213 42.88517870034603 19.396891518475798 25 13.934643885518923 24.771178916097554 40.85462496577019 20.43955223261333 26 13.720551991967406 25.29728070102648 42.46819739604511 18.513969910961006 27 14.767361773809426 23.69366603324233 43.88054004265241 17.658432150295827 28 13.188226605481749 22.456414043764365 43.746940062567944 20.608419288185946 29 14.593930743761877 21.589258893526626 43.607531387697186 20.209278975014314 30 19.527587151167133 21.553991818038487 41.51764598494718 17.400775045847197 31 18.511895377108765 25.355367648889292 38.78258055414948 17.350156419852457 32 17.338953937050345 24.104008829216074 38.854774332207555 19.702262901526026 33 19.687741164560325 22.472595407811866 36.521338655204175 21.318324772423637 34 18.099478047282773 21.878034005758906 37.924553352861615 22.097934594096706 35 19.226364835821393 22.16473458413894 38.16022039847646 20.4486801815632 36 22.79041399397555 24.25752433428209 35.19612643039109 17.755935241351267 37 21.424125998888048 24.763295687459028 36.98893858549984 16.823639728153083 38 19.542523794903286 24.304823706113236 37.65693848592221 18.495714013061264 39 20.05617837671875 22.87298044129484 34.43062343891328 22.640217743073134 40 24.63384477507904 22.399986722983346 33.005833589192505 19.960334912745108 41 24.735911840609415 24.481988897094823 31.475657419777775 19.306441842517984 42 23.227310823258012 27.348579774124754 33.36223850500792 16.061870897609307 43 19.51555485482412 25.32964342912148 37.510061489183386 17.644740226871022 44 18.942568604834495 24.038038652714736 35.08410160236995 21.935291140080825 45 21.72991228870873 21.55565144512028 33.70370677708719 23.010729489083804 46 23.148063630102317 22.46969106041872 34.182509190184966 20.199736119293995 47 19.500618211087968 26.780987312150963 35.63219344613265 18.08620103062842 48 18.69237982225394 26.420018421860608 36.550382129135585 18.33721962674987 49 21.219162054286404 23.723539320714636 35.582819540449265 19.4744790845497 50 19.637537445336033 22.08673211129459 34.07006945539337 24.205660987976003 51 18.855023276269822 21.882183073463395 31.85944618244281 27.40334746782398 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 409.0 1 696.0 2 983.0 3 8332.5 4 15682.0 5 10014.5 6 4347.0 7 4262.0 8 4177.0 9 4240.0 10 4303.0 11 4178.5 12 4054.0 13 3924.0 14 3794.0 15 3616.5 16 3439.0 17 3327.5 18 3216.0 19 3071.0 20 2926.0 21 2798.0 22 2670.0 23 2630.5 24 2591.0 25 2634.0 26 2610.5 27 2544.0 28 2737.5 29 2931.0 30 3073.0 31 3215.0 32 3523.0 33 3831.0 34 4256.0 35 4681.0 36 5061.0 37 5441.0 38 5979.5 39 6518.0 40 7396.0 41 8274.0 42 9765.0 43 11256.0 44 12716.5 45 14177.0 46 17306.5 47 20436.0 48 23426.5 49 26417.0 50 25972.5 51 25528.0 52 21583.0 53 17638.0 54 13865.0 55 10092.0 56 8094.0 57 6096.0 58 5280.5 59 4465.0 60 3924.5 61 3384.0 62 2945.5 63 2507.0 64 2159.0 65 1811.0 66 1593.0 67 1375.0 68 1107.5 69 840.0 70 750.0 71 660.0 72 587.5 73 515.0 74 466.5 75 385.5 76 353.0 77 294.0 78 235.0 79 143.5 80 52.0 81 43.0 82 34.0 83 26.0 84 18.0 85 11.0 86 4.0 87 3.0 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 241018.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.04197386587334 #Duplication Level Percentage of deduplicated Percentage of total 1 72.49840972442189 34.82966705298054 2 12.491213416083028 12.002050969770146 3 5.2611579478916575 7.5826923791052865 4 2.8955109251476716 5.564242407771807 5 1.8183426378405068 4.367838474316841 6 1.2354229021347303 3.561129286659486 7 0.840701710824991 2.827227873431446 8 0.6025396832408111 2.315775657232532 9 0.4326267604103711 1.8705819165581246 >10 1.8243148998767955 14.186218952185136 >50 0.06420158899301666 2.063206980195632 >100 0.03061921936590025 2.3521888226379364 >500 0.002963150261216153 0.8584041920823133 >1k 9.877167537387177E-4 0.5827088711316091 >5k 0.0 0.0 >10k+ 9.877167537387177E-4 5.036066163941178 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10613 4.403405554771843 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCC 1228 0.5095055141109792 No Hit CTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGCT 652 0.2705192143325395 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGC 627 0.2601465450713225 No Hit CCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 530 0.2199005883378005 No Hit GCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 406 0.16845214880216416 No Hit TCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 365 0.15144097121376826 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 266 0.11036520093934893 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 254 0.10538631969396477 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.287945298691384 0.0 2 0.0 0.0 0.0 0.8995178783327387 0.0 3 0.0 0.0 0.0 1.3268718518948792 0.0 4 0.0 0.0 0.0 1.9633388377631547 0.0 5 0.0 0.0 0.0 3.3960119161224473 0.0 6 0.0 0.0 0.0 4.930752060012115 0.0 7 0.0 0.0 0.0 6.261358072841032 0.0 8 0.0 0.0 0.0 8.249591316831108 0.0 9 0.0 0.0 0.0 9.250346447153325 0.0 10 0.0 0.0 0.0 11.289198317138139 0.0 11 0.0 0.0 0.0 16.01955040702354 0.0 12 0.0 0.0 0.0 19.670729986971928 0.0 13 0.0 0.0 0.0 21.112531014281092 0.0 14 0.0 0.0 0.0 21.67846384917309 0.0 15 0.0 0.0 0.0 22.35144263084085 0.0 16 0.0 0.0 0.0 23.9704088491316 0.0 17 0.0 0.0 0.0 26.04867686230904 0.0 18 0.0 0.0 0.0 27.97259955687957 0.0 19 0.0 0.0 0.0 29.070442871486776 0.0 20 0.0 0.0 0.0 30.0226539096665 0.0 21 0.0 0.0 0.0 31.1229866648964 0.0 22 0.0 0.0 0.0 32.07519770307612 0.0 23 0.0 0.0 0.0 32.875967770042074 0.0 24 4.1490677044868016E-4 0.0 0.0 33.33029068368338 0.0 25 4.1490677044868016E-4 0.0 0.0 33.669269515139945 0.0 26 4.1490677044868016E-4 0.0 0.0 33.944767610717875 0.0 27 4.1490677044868016E-4 0.0 0.0 34.2331278161797 0.0 28 4.1490677044868016E-4 0.0 0.0 34.48871038677609 0.0 29 4.1490677044868016E-4 0.0 0.0 34.75591034694504 0.0 30 4.1490677044868016E-4 0.0 0.0 35.01149291754143 0.0 31 4.1490677044868016E-4 0.0 0.0 35.26168170012198 0.0 32 4.1490677044868016E-4 0.0 0.0 35.57742575243343 0.0 33 4.1490677044868016E-4 0.0 0.0 35.82512509439129 0.0 34 4.1490677044868016E-4 0.0 0.0 36.04917475043358 0.0 35 4.1490677044868016E-4 0.0 0.0 36.31512999029118 0.0 36 4.1490677044868016E-4 0.0 0.0 36.52507281613821 0.0 37 4.1490677044868016E-4 0.0 0.0 36.75161191280319 0.0 38 4.1490677044868016E-4 0.0 0.0 37.02005659328349 0.0 39 4.1490677044868016E-4 0.0 0.0 37.418367092914224 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGAC 35 1.2065902E-7 45.000004 5 CTGTCGG 35 1.2065902E-7 45.000004 2 CGCGGGA 45 3.8198777E-10 45.000004 4 GCGCGAC 35 1.2065902E-7 45.000004 9 CGGGAGG 45 3.8198777E-10 45.000004 6 CGGGTCC 20 7.0221827E-4 45.0 6 CGTGGCA 25 3.881604E-5 45.0 15 TCTTGCG 40 6.7757355E-9 45.0 1 CCGGGAG 20 7.0221827E-4 45.0 5 ACACGCT 20 7.0221827E-4 45.0 42 GGCACGT 25 3.881604E-5 45.0 11 TTGCTCG 20 7.0221827E-4 45.0 1 GGGTACG 25 3.881604E-5 45.0 7 GGCAACG 25 3.881604E-5 45.0 8 GCACGTG 25 3.881604E-5 45.0 12 TACGGGG 20 7.0221827E-4 45.0 4 TACGGGA 20 7.0221827E-4 45.0 4 ACGGGGG 20 7.0221827E-4 45.0 5 AGGCACG 25 3.881604E-5 45.0 10 GCGGGTC 20 7.0221827E-4 45.0 5 >>END_MODULE