##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933597.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 241151 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09920755045594 33.0 31.0 34.0 30.0 34.0 2 32.301454275536905 34.0 31.0 34.0 30.0 34.0 3 32.39816131801236 34.0 31.0 34.0 30.0 34.0 4 35.92508843007079 37.0 35.0 37.0 35.0 37.0 5 36.00377771603684 37.0 35.0 37.0 35.0 37.0 6 35.98949620777024 37.0 35.0 37.0 35.0 37.0 7 35.99364298717401 37.0 35.0 37.0 35.0 37.0 8 35.89544310411319 37.0 35.0 37.0 35.0 37.0 9 37.71441130246194 39.0 38.0 39.0 35.0 39.0 10 37.1362797583257 39.0 37.0 39.0 33.0 39.0 11 37.11824541469868 39.0 37.0 39.0 33.0 39.0 12 37.16040986767627 39.0 37.0 39.0 34.0 39.0 13 37.137926029748996 39.0 37.0 39.0 33.0 39.0 14 38.27381599081074 40.0 38.0 41.0 33.0 41.0 15 38.29598882028273 40.0 38.0 41.0 33.0 41.0 16 38.451003727954685 40.0 38.0 41.0 34.0 41.0 17 38.46511936504514 40.0 38.0 41.0 34.0 41.0 18 38.18144647959163 39.0 38.0 40.0 34.0 41.0 19 37.84750633420554 39.0 37.0 41.0 34.0 41.0 20 37.33079688659802 39.0 35.0 40.0 34.0 41.0 21 37.253695817143615 39.0 35.0 40.0 33.0 41.0 22 37.256971772872596 38.0 35.0 40.0 33.0 41.0 23 37.14120613225738 38.0 35.0 40.0 33.0 41.0 24 37.0294379869874 38.0 35.0 40.0 33.0 41.0 25 36.95413247301483 38.0 35.0 40.0 33.0 41.0 26 36.94342134181488 38.0 35.0 40.0 33.0 41.0 27 36.894381528585825 38.0 35.0 40.0 33.0 41.0 28 36.828704836388816 38.0 35.0 40.0 33.0 41.0 29 36.65201471277332 38.0 35.0 40.0 33.0 41.0 30 36.37364970495665 38.0 35.0 40.0 31.0 41.0 31 35.977503721734514 38.0 35.0 40.0 30.0 41.0 32 35.52346869803567 38.0 35.0 40.0 27.0 41.0 33 34.875584177548504 38.0 35.0 40.0 21.0 41.0 34 34.39073858287961 38.0 34.0 40.0 18.0 41.0 35 34.04100335474454 38.0 34.0 40.0 15.0 41.0 36 33.75460603522274 38.0 34.0 40.0 13.0 41.0 37 33.580677666690164 38.0 33.0 40.0 12.0 41.0 38 33.459218497953565 38.0 33.0 40.0 10.0 41.0 39 33.44995459276553 38.0 33.0 40.0 10.0 41.0 40 33.31150606881166 38.0 33.0 40.0 10.0 41.0 41 33.138954431041135 38.0 33.0 40.0 10.0 41.0 42 32.85314180741527 37.0 32.0 40.0 10.0 41.0 43 32.71569265729771 37.0 32.0 40.0 10.0 41.0 44 32.6263959096168 37.0 32.0 40.0 10.0 41.0 45 32.579690733192066 37.0 32.0 40.0 10.0 41.0 46 32.31179219659052 37.0 31.0 40.0 10.0 41.0 47 32.16599143275375 36.0 31.0 40.0 10.0 41.0 48 32.01901298356631 36.0 31.0 40.0 8.0 41.0 49 31.993298804483498 36.0 31.0 40.0 8.0 41.0 50 31.80981625620462 36.0 30.0 40.0 8.0 41.0 51 30.89993406620748 35.0 27.0 39.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 1.0 11 11.0 12 4.0 13 11.0 14 10.0 15 12.0 16 20.0 17 49.0 18 99.0 19 192.0 20 290.0 21 545.0 22 863.0 23 1448.0 24 2916.0 25 5235.0 26 7886.0 27 8175.0 28 7150.0 29 6056.0 30 5996.0 31 6181.0 32 7051.0 33 8991.0 34 13487.0 35 17206.0 36 21247.0 37 27433.0 38 46698.0 39 45875.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.751508391008123 4.97945270805429 39.522125141508845 31.74691375942874 2 40.285961907684396 4.583435274993676 39.04026937479007 16.090333442531858 3 18.342449336722634 4.784139398136437 59.223474088848896 17.64993717629203 4 14.545658114625276 4.873709833258 59.885300081691554 20.69533197042517 5 13.215371281893917 6.007854000190751 60.15774348851964 20.61903122939569 6 16.792797873531523 6.73561378555345 63.63937947593001 12.83220886498501 7 64.54213335213207 2.4217191718052176 28.90097905461723 4.135168421445484 8 64.70178435917745 2.4059614100708684 27.95219592703327 4.940058303718417 9 59.600831014592515 4.8218750907108 30.258219953473137 5.319073941223549 10 27.638284726167424 19.833216532380128 37.13565359463573 15.392845146816725 11 20.083267330427823 20.328756671131366 41.39190797467147 18.196068023769342 12 17.247699574125754 18.7227090080489 46.087306293567096 17.942285124258245 13 19.65656372977927 19.46000638604028 47.29318974418518 13.590240139995272 14 17.74572778051926 20.145054343544086 47.22932934136703 14.879888534569627 15 14.408814394300668 19.98913543796211 48.178941824831746 17.423108342905483 16 15.129109976736569 19.188807013033326 46.526035554486604 19.156047455743497 17 15.04244228719765 19.20746752035032 45.06553984847668 20.684550343975353 18 16.63522025618803 17.901646686101238 47.24259903545911 18.22053402225162 19 16.393463016947887 21.608867473077034 46.03588622896028 15.9617832810148 20 17.40113041206547 23.69179476759375 43.67968617173472 15.22738864860606 21 15.510613681883964 24.811010528672906 44.72135715796327 14.957018631479862 22 14.235893693163204 22.67334574602635 43.457833473632704 19.63292708717774 23 13.644148272244362 23.567806063420843 42.137913589410786 20.65013207492401 24 14.173277324166186 23.987045461142603 42.496195329897034 19.343481884794176 25 14.180326849152605 24.908045166721266 40.542647552778135 20.368980431347993 26 13.990404352459663 25.310697446827923 42.19182172165987 18.507076479052547 27 14.984387375544783 23.71916351165867 43.454101372169305 17.842347740627243 28 13.3360425625438 22.614876156433105 43.57311394105768 20.475967339965415 29 14.782853896521267 21.474926498335066 43.478982048591966 20.263237556551704 30 19.684761829724945 21.605550049554015 41.396884109956 17.31280401076504 31 18.916778284145618 25.232323316096554 38.58744106389773 17.263457335860107 32 17.488627457485144 24.145037756426472 38.637617094683414 19.72871769140497 33 19.74945158842385 22.641000866676894 36.157428333284955 21.452119211614303 34 18.47970773498762 22.028936226679548 37.46449320135517 22.026862836977664 35 19.41480649053912 22.403390406840526 37.86465741381956 20.317145688800792 36 22.90639474851856 24.387209673606993 34.89722207247741 17.809173505397034 37 21.60513537161364 24.96402668867224 36.89638442303785 16.534453516676272 38 19.558285057909774 24.356108828078675 37.59179932905109 18.49380678496046 39 20.04760502755535 22.815994957516246 34.459322167438664 22.677077847489745 40 24.750467549377774 22.44983433616282 32.968969649721544 19.830728464737863 41 24.687851180380758 24.58501105116711 31.49603360550029 19.231104162951844 42 23.247674693449333 27.375378911968017 33.24182773449001 16.13511866009264 43 19.563675871134684 25.382022052572868 37.58806722758769 17.466234848704755 44 19.28418293932018 23.88379065398858 35.03821257220579 21.793813834485448 45 21.884213625487764 21.513906224730565 33.4956106340011 23.10626951578057 46 23.207036255292326 22.727668556215814 34.037594702074635 20.027700486417224 47 19.575286853465258 26.949919345140593 35.6361781622303 17.838615639163844 48 18.54398281574615 26.5999311634619 36.40706445339227 18.44902156739968 49 21.191701465057164 23.926087803907095 35.517580271282306 19.364630459753432 50 19.76479467221782 22.274010889442714 33.931851827278344 24.029342611061118 51 18.702804466910774 22.09860212066299 31.680150611027948 27.518442801398297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 324.0 1 684.0 2 1044.0 3 8344.5 4 15645.0 5 10022.0 6 4399.0 7 4153.5 8 3908.0 9 4075.5 10 4243.0 11 4161.0 12 4079.0 13 3926.0 14 3773.0 15 3608.5 16 3444.0 17 3286.0 18 3128.0 19 3015.5 20 2903.0 21 2794.0 22 2685.0 23 2643.0 24 2601.0 25 2573.5 26 2564.0 27 2582.0 28 2692.5 29 2803.0 30 3085.5 31 3368.0 32 3664.0 33 3960.0 34 4339.5 35 4719.0 36 5015.0 37 5311.0 38 6021.5 39 6732.0 40 7524.5 41 8317.0 42 9840.0 43 11363.0 44 12759.5 45 14156.0 46 17197.0 47 20238.0 48 23386.5 49 26535.0 50 25843.5 51 25152.0 52 21336.0 53 17520.0 54 13826.5 55 10133.0 56 8222.5 57 6312.0 58 5493.5 59 4675.0 60 4106.5 61 3538.0 62 2976.0 63 2414.0 64 2170.0 65 1926.0 66 1651.5 67 1377.0 68 1147.5 69 918.0 70 825.0 71 732.0 72 621.0 73 510.0 74 466.5 75 390.5 76 358.0 77 290.0 78 222.0 79 141.0 80 60.0 81 53.0 82 46.0 83 35.0 84 24.0 85 13.5 86 3.0 87 2.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 241151.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.20396242534228 #Duplication Level Percentage of deduplicated Percentage of total 1 72.91909016199513 35.14989082258959 2 12.27764029243259 11.83661822656578 3 5.106593801100187 7.384741671291578 4 2.8553084387324783 5.505487227736925 5 1.7417158381804156 4.197880240963616 6 1.2843397171013635 3.7146158078717315 7 0.8706840319779514 2.937929425326748 8 0.5929005264169478 2.286412375789457 9 0.44959995561375404 1.9505249430156864 >10 1.7954105886973628 13.974514975513788 >50 0.07806125159626016 2.579703624791929 >100 0.023714810611522072 1.9709774001826077 >500 0.002964351326440259 0.9168998297127887 >1k 9.881171088134196E-4 0.6072972898097692 >5k 0.0 0.0 >10k+ 9.881171088134196E-4 4.986506138838019 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10469 4.341263357813154 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCC 1275 0.5287143739814473 No Hit CTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGCT 699 0.28985988032394644 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGC 678 0.2811516435760167 No Hit CCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 548 0.22724351132692797 No Hit TCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 431 0.17872619230274805 No Hit GCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 396 0.16421246438953188 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 256 0.10615755273666706 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.146779403776057E-4 0.0 0.0 0.30810570970056106 0.0 2 4.146779403776057E-4 0.0 0.0 0.9317813320284801 0.0 3 4.146779403776057E-4 0.0 0.0 1.341068459181177 0.0 4 4.146779403776057E-4 0.0 0.0 1.9775990976608018 0.0 5 4.146779403776057E-4 0.0 0.0 3.4546819212858333 0.0 6 4.146779403776057E-4 0.0 0.0 5.018017756509407 0.0 7 4.146779403776057E-4 0.0 0.0 6.315130354010558 0.0 8 4.146779403776057E-4 0.0 0.0 8.216843388582257 0.0 9 8.293558807552114E-4 0.0 0.0 9.197971395515673 0.0 10 8.293558807552114E-4 0.0 0.0 11.188840187268557 0.0 11 8.293558807552114E-4 0.0 0.0 15.86101654150304 0.0 12 8.293558807552114E-4 0.0 0.0 19.510182416825973 0.0 13 8.293558807552114E-4 0.0 0.0 20.927966294977008 0.0 14 8.293558807552114E-4 0.0 0.0 21.44175226310486 0.0 15 8.293558807552114E-4 0.0 0.0 22.14504604998528 0.0 16 8.293558807552114E-4 0.0 0.0 23.716675444016406 0.0 17 8.293558807552114E-4 0.0 0.0 25.717496506338353 0.0 18 8.293558807552114E-4 0.0 0.0 27.56073995131681 0.0 19 8.293558807552114E-4 0.0 0.0 28.598678836081955 0.0 20 8.293558807552114E-4 0.0 0.0 29.49355383141683 0.0 21 8.293558807552114E-4 0.0 0.0 30.56052017200841 0.0 22 8.293558807552114E-4 0.0 0.0 31.477373098183296 0.0 23 8.293558807552114E-4 0.0 0.0 32.228769526147516 0.0 24 8.293558807552114E-4 0.0 0.0 32.67662170175533 0.0 25 8.293558807552114E-4 0.0 0.0 33.038635543704984 0.0 26 8.293558807552114E-4 0.0 0.0 33.328910101969306 0.0 27 0.0012440338211328172 0.0 0.0 33.635357099908354 0.0 28 0.0012440338211328172 0.0 0.0 33.89079871118096 0.0 29 0.0012440338211328172 0.0 0.0 34.165315507710936 0.0 30 0.0012440338211328172 0.0 0.0 34.41951308516241 0.0 31 0.0012440338211328172 0.0 0.0 34.66458774792557 0.0 32 0.0012440338211328172 0.0 0.0 34.97103474586462 0.0 33 0.0012440338211328172 0.0 0.0 35.23476991594478 0.0 34 0.0012440338211328172 0.0 0.0 35.45579325816605 0.0 35 0.0012440338211328172 0.0 0.0 35.71330825914054 0.0 36 0.0016587117615104229 0.0 0.0 35.93184353371954 0.0 37 0.0016587117615104229 0.0 0.0 36.17028334943666 0.0 38 0.0016587117615104229 0.0 0.0 36.421163503365115 0.0 39 0.0016587117615104229 0.0 0.0 36.810546089379685 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGGACC 30 2.1583455E-6 45.000004 5 ATTCGAG 30 2.1583455E-6 45.000004 14 TACGGGA 30 2.1583455E-6 45.000004 4 GCTTGCG 30 2.1583455E-6 45.000004 1 GCCCTAC 30 2.1583455E-6 45.000004 26 GCGATCG 30 2.1583455E-6 45.000004 9 CACAAAT 30 2.1583455E-6 45.000004 32 TTCGAGC 30 2.1583455E-6 45.000004 15 AGCAACG 25 3.8816113E-5 45.0 10 TCGCATT 25 3.8816113E-5 45.0 22 CACGGGA 40 6.7757355E-9 45.0 4 ACGGGAG 45 3.8198777E-10 45.0 5 ACGGGAA 20 7.022192E-4 45.0 5 TATTCGG 20 7.022192E-4 45.0 2 TTGCGGT 20 7.022192E-4 45.0 3 AGCTCGC 25 3.8816113E-5 45.0 19 TTGTTCG 25 3.8816113E-5 45.0 1 GGCGATA 25 3.8816113E-5 45.0 8 GCTCGCA 25 3.8816113E-5 45.0 20 CGATCTG 25 3.8816113E-5 45.0 10 >>END_MODULE