##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933594.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 49801 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.094556334210154 33.0 31.0 34.0 30.0 34.0 2 32.279391980080725 34.0 31.0 34.0 30.0 34.0 3 32.37248248027148 34.0 31.0 34.0 30.0 34.0 4 35.92779261460613 37.0 35.0 37.0 35.0 37.0 5 35.92568422320837 37.0 35.0 37.0 35.0 37.0 6 35.89188972108994 37.0 35.0 37.0 35.0 37.0 7 35.935704102327264 37.0 35.0 37.0 35.0 37.0 8 35.72368024738459 37.0 35.0 37.0 35.0 37.0 9 37.58053051143551 39.0 37.0 39.0 35.0 39.0 10 37.08027951245959 39.0 37.0 39.0 33.0 39.0 11 37.06479789562459 39.0 37.0 39.0 33.0 39.0 12 37.08064095098492 39.0 37.0 39.0 33.0 39.0 13 37.03903536073573 39.0 37.0 39.0 33.0 39.0 14 38.19104034055541 40.0 37.0 41.0 33.0 41.0 15 38.22200357422542 40.0 37.0 41.0 33.0 41.0 16 38.250717857071145 40.0 38.0 41.0 33.0 41.0 17 38.208831147968915 40.0 37.0 41.0 33.0 41.0 18 37.95510130318668 39.0 37.0 40.0 33.0 41.0 19 37.65860123290697 39.0 37.0 40.0 34.0 41.0 20 37.24758538985161 39.0 35.0 40.0 33.0 41.0 21 37.0913636272364 38.0 35.0 40.0 33.0 41.0 22 37.09794984036465 38.0 35.0 40.0 33.0 41.0 23 37.00391558402442 38.0 35.0 40.0 33.0 41.0 24 36.855906507901445 38.0 35.0 40.0 33.0 41.0 25 36.80644966968535 38.0 35.0 40.0 33.0 41.0 26 36.71104997891609 38.0 35.0 40.0 32.0 41.0 27 36.57836188028353 38.0 35.0 40.0 32.0 41.0 28 36.47876548663682 38.0 35.0 40.0 32.0 41.0 29 36.37093632657979 38.0 35.0 40.0 31.0 41.0 30 36.151201783096724 38.0 35.0 40.0 31.0 41.0 31 35.87259291982089 38.0 35.0 40.0 30.0 41.0 32 35.464187466115135 38.0 35.0 40.0 28.0 41.0 33 35.01154595289251 38.0 35.0 40.0 24.0 41.0 34 34.68866087026365 38.0 34.0 40.0 21.0 41.0 35 34.31095761129295 38.0 34.0 40.0 19.0 41.0 36 33.984859741772254 38.0 33.0 40.0 18.0 41.0 37 33.82924037669926 37.0 33.0 40.0 18.0 41.0 38 33.7315314953515 37.0 33.0 40.0 17.0 41.0 39 33.66755687636795 37.0 33.0 40.0 15.0 41.0 40 33.531475271580895 37.0 33.0 40.0 15.0 41.0 41 33.29941165840043 37.0 33.0 40.0 15.0 41.0 42 33.09098210879299 37.0 33.0 40.0 15.0 41.0 43 32.97692817413305 37.0 32.0 40.0 13.0 41.0 44 32.89986144856529 37.0 32.0 40.0 12.0 41.0 45 32.88901829280537 37.0 32.0 40.0 12.0 41.0 46 32.61261822051766 36.0 31.0 40.0 10.0 41.0 47 32.353306158510875 36.0 31.0 40.0 10.0 41.0 48 32.258267906266944 36.0 31.0 40.0 10.0 41.0 49 32.268187385795464 36.0 31.0 40.0 10.0 41.0 50 32.16979578723319 35.0 31.0 40.0 10.0 41.0 51 31.046324370996565 35.0 28.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 1.0 11 1.0 12 4.0 13 2.0 14 3.0 15 6.0 16 9.0 17 14.0 18 19.0 19 46.0 20 73.0 21 91.0 22 187.0 23 273.0 24 472.0 25 862.0 26 1219.0 27 1510.0 28 1444.0 29 1336.0 30 1386.0 31 1479.0 32 1619.0 33 2102.0 34 3077.0 35 4168.0 36 4935.0 37 6006.0 38 9408.0 39 8047.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.20033734262364 4.754924599907633 39.708037991204996 32.33670006626373 2 36.06754884440072 4.8352442722033695 41.236119756631396 17.86108712676452 3 18.682355775988434 5.042067428364892 57.13941487118732 19.13616192445935 4 15.264753719804824 5.375394068392201 57.95465954498905 21.405192666813917 5 13.214594084456136 6.668540792353567 58.08517901246964 22.03168611072067 6 17.57394429830726 7.546033212184494 61.53290094576415 13.3471215437441 7 65.4565169374109 3.007971727475352 26.911106202686693 4.62440513242706 8 64.40432923033674 3.5420975482420034 26.117949438766292 5.935623782654967 9 59.731732294532236 5.521977470331921 28.342804361358205 6.403485873777635 10 28.947209895383626 21.861006807092227 34.246300275094875 14.945483022429269 11 20.66223569807835 18.94941868637176 39.45904700708821 20.92929860846168 12 19.602016023774624 15.69044798297223 44.92078472319833 19.78675127005482 13 20.106021967430372 16.93741089536355 46.752073251541134 16.20449388566495 14 18.021726471355997 18.987570530712233 45.36455091263228 17.62615208529949 15 14.14831027489408 18.33898917692416 47.585389851609406 19.92731069657236 16 14.616172366016746 17.51772052770025 46.035220176301685 21.830886929981325 17 13.710568060882311 17.493624626011524 44.58143410774884 24.214373205357322 18 15.174394088472118 17.399249011064036 45.67779763458565 21.748559265878196 19 16.182405975783617 20.065862131282504 45.24005542057388 18.51167647235999 20 17.387201060219674 22.12806971747555 43.12363205558121 17.36109716672356 21 16.4936447059296 22.96339430935122 42.950944760145376 17.592016224573804 22 14.634244292283288 21.204393486074576 41.37667918314894 22.784683038493203 23 14.73062789903817 22.124053733860766 40.17991606594245 22.965402301158612 24 15.584024417180379 21.549768076946247 40.54336258308066 22.322844922792715 25 15.519768679343787 22.686291439930926 38.1498363486677 23.64410353205759 26 15.228609867271741 23.437280375896066 39.469086966125175 21.865022790707016 27 15.935422983474226 22.34493283267404 42.09754824200317 19.622095941848556 28 15.654304130439147 20.650187747233993 41.824461356197666 21.871046766129194 29 17.077970321881086 19.614063974618983 40.39477118933355 22.91319451416638 30 21.178289592578462 20.604003935663943 39.49719885142869 18.72050762032891 31 21.262625248488987 24.316780787534388 34.73625027609887 19.684343687877753 32 19.443384670990543 24.47742013212586 33.94309351217847 22.136101684705125 33 20.887130780506418 22.714403325234432 33.05756912511797 23.34089676914118 34 22.51762012810988 20.973474428224335 33.34471195357523 23.16419349009056 35 22.6943234071605 21.3810967651252 32.97925744462963 22.945322383084676 36 23.712375253508966 24.674203329250417 33.91698961868236 17.69643179855826 37 23.921206401477882 23.642095540250196 34.103732856769945 18.332965201501978 38 21.732495331419045 24.706331198168712 31.031505391458005 22.529668078954238 39 21.62807975743459 25.505511937511294 29.85683018413285 23.00957812092127 40 24.87500250998976 23.555751892532278 32.617818919298806 18.951426678179153 41 22.124053733860766 23.66016746651674 34.62179474307745 19.59398405654505 42 21.75659123310777 25.262544928816688 34.44107548041204 18.5397883576635 43 20.45541254191683 23.74249513061987 35.36675970362041 20.435332623842896 44 21.18029758438586 22.222445332423042 32.91098572317825 23.68627136001285 45 23.531655990843557 20.01566233609767 31.744342483082672 24.708339189976105 46 24.20232525451296 21.51161623260577 35.061544948896604 19.224513563984658 47 19.674303728840787 24.87500250998976 36.74625007529969 18.704443685869762 48 18.39320495572378 24.061765827995423 36.97315314953515 20.57187606674565 49 21.439328527539608 21.624063773819802 36.54344290275296 20.393164795887632 50 21.28270516656292 18.83897913696512 35.017369129133954 24.860946567338004 51 18.792795325395073 18.941386719142187 33.10576092849541 29.16005702696733 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 139.0 1 285.0 2 431.0 3 1911.5 4 3392.0 5 2159.0 6 926.0 7 881.0 8 836.0 9 788.5 10 741.0 11 732.0 12 723.0 13 638.5 14 554.0 15 535.0 16 516.0 17 484.0 18 452.0 19 449.0 20 446.0 21 396.0 22 346.0 23 323.5 24 301.0 25 285.5 26 306.0 27 342.0 28 330.0 29 318.0 30 386.0 31 454.0 32 469.0 33 484.0 34 592.0 35 700.0 36 772.5 37 845.0 38 944.0 39 1043.0 40 1185.0 41 1327.0 42 1601.5 43 1876.0 44 2177.5 45 2479.0 46 3116.5 47 3754.0 48 4624.5 49 5495.0 50 5593.5 51 5692.0 52 4883.5 53 4075.0 54 3226.0 55 2377.0 56 2019.0 57 1661.0 58 1590.0 59 1519.0 60 1447.0 61 1375.0 62 1248.5 63 1122.0 64 997.5 65 873.0 66 731.5 67 590.0 68 499.0 69 408.0 70 355.5 71 303.0 72 255.5 73 208.0 74 184.0 75 127.5 76 95.0 77 87.0 78 79.0 79 67.0 80 55.0 81 34.0 82 13.0 83 7.5 84 2.0 85 3.0 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 49801.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.82994317383185 #Duplication Level Percentage of deduplicated Percentage of total 1 81.82215998599685 56.31814622196342 2 11.360056012602836 15.63824019598 3 3.617480599801622 7.469729523503545 4 1.391563101697882 3.8312483685066567 5 0.5805472898068732 1.9979518483564587 6 0.3413267985296692 1.409610248790185 7 0.218799229826711 1.0541956988815486 8 0.14586615321780733 0.8031967229573703 9 0.06709843048019137 0.4156543041304392 >10 0.4230118443316413 4.696692837493223 >50 0.020421261450493028 1.1023875022589908 >100 0.008751969193068442 1.178691190939941 >500 0.0 0.0 >1k 0.0029173230643561466 4.084255336238228 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2034 4.084255336238228 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCC 213 0.42770225497479974 No Hit CCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 210 0.4216782795526194 TruSeq Adapter, Index 15 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGCT 164 0.32931065641252183 TruSeq Adapter, Index 14 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 99 0.19879118893194914 TruSeq Adapter, Index 15 (95% over 23bp) TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 96 0.1927672135097689 No Hit TCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 94 0.18875122989498203 TruSeq Adapter, Index 15 (95% over 23bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGC 73 0.14658340193972008 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 72 0.14457541013232666 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 63 0.1265034838657858 No Hit GGGACTGTCTAGGGCCTGTCTCTTATACACATCTGACGCGTGCAGTATCGT 52 0.10441557398445814 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0020079918073934258 0.0 0.0 0.3634465171382101 0.0 2 0.0020079918073934258 0.0 0.0 1.2931467239613663 0.0 3 0.0020079918073934258 0.0 0.0 1.7630168068914278 0.0 4 0.0020079918073934258 0.0 0.0 2.546133611774864 0.0 5 0.0020079918073934258 0.0 0.0 4.246902672637096 0.0 6 0.0020079918073934258 0.0 0.0 5.5601293146723965 0.0 7 0.0020079918073934258 0.0 0.0 6.835204112367221 0.0 8 0.0020079918073934258 0.0 0.0 8.752836288427943 0.0 9 0.0020079918073934258 0.0 0.0 9.658440593562378 0.0 10 0.0020079918073934258 0.0 0.0 11.70458424529628 0.0 11 0.0020079918073934258 0.0 0.0 16.30087749241983 0.0 12 0.0020079918073934258 0.0 0.0 20.511636312523844 0.0 13 0.0020079918073934258 0.0 0.0 21.8690387743218 0.0 14 0.0020079918073934258 0.0 0.0 22.318828939177926 0.0 15 0.0020079918073934258 0.0 0.0 22.973434268388186 0.0 16 0.0020079918073934258 0.0 0.0 24.579827714302926 0.0 17 0.0020079918073934258 0.0 0.0 26.45930804602317 0.0 18 0.0020079918073934258 0.0 0.0 28.342804361358205 0.0 19 0.0020079918073934258 0.0 0.0 29.445191863617197 0.0 20 0.0020079918073934258 0.0 0.0 30.43713981646955 0.0 21 0.0020079918073934258 0.0 0.0 31.589727113913376 0.0 22 0.0020079918073934258 0.0 0.0 32.533483263388284 0.0 23 0.0020079918073934258 0.0 0.0 33.260376297664706 0.0 24 0.0020079918073934258 0.0 0.0 33.64791871649164 0.0 25 0.0020079918073934258 0.0 0.0 33.92502158591193 0.0 26 0.0020079918073934258 0.0 0.0 34.167988594606534 0.0 27 0.0020079918073934258 0.0 0.0 34.38284371799763 0.0 28 0.0020079918073934258 0.0 0.0 34.58163490692958 0.0 29 0.0020079918073934258 0.0 0.0 34.74629023513584 0.0 30 0.0020079918073934258 0.0 0.0 34.939057448645606 0.0 31 0.0020079918073934258 0.0 0.0 35.115760727696234 0.0 32 0.0020079918073934258 0.0 0.0 35.26836810505813 0.0 33 0.0020079918073934258 0.0 0.0 35.45109535953093 0.0 34 0.0020079918073934258 0.0 0.0 35.569566876167144 0.0 35 0.0020079918073934258 0.0 0.0 35.70008634364772 0.0 36 0.0020079918073934258 0.0 0.0 35.84265376197265 0.0 37 0.0020079918073934258 0.0 0.0 35.949077327764506 0.0 38 0.0020079918073934258 0.0 0.0 36.04746892632678 0.0 39 0.0020079918073934258 0.0 0.0 36.212124254533045 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGGGCT 20 6.968403E-4 45.000004 5 ATGGGAC 20 6.968403E-4 45.000004 5 TCCCAAG 20 6.968403E-4 45.000004 16 GGACCGA 20 6.968403E-4 45.000004 8 ATTGGGA 20 6.968403E-4 45.000004 4 CAACATG 20 6.968403E-4 45.000004 30 ACTCCGG 20 6.968403E-4 45.000004 30 AACCCGA 20 6.968403E-4 45.000004 24 GCAACCC 20 6.968403E-4 45.000004 22 GTGGGAC 20 6.968403E-4 45.000004 5 CGGGATG 20 6.968403E-4 45.000004 6 GCATGGG 20 6.968403E-4 45.000004 3 TGGGTAT 20 6.968403E-4 45.000004 6 GTGCGGG 20 6.968403E-4 45.000004 3 CGGTCGG 20 6.968403E-4 45.000004 1 TGGGAAG 20 6.968403E-4 45.000004 6 CCGACTC 20 6.968403E-4 45.000004 27 GACTCCG 20 6.968403E-4 45.000004 29 TTCGGGC 20 6.968403E-4 45.000004 4 GCCCTTG 20 6.968403E-4 45.000004 1 >>END_MODULE