SRR2933591.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933591.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	61204
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5039	8.233122018168746	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCC	376	0.6143389320959415	No Hit
CTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGCT	261	0.4264427161623423	No Hit
CCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC	259	0.4231749558852363	No Hit
TCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC	182	0.29736618521665253	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGC	181	0.2957323050780995	No Hit
GCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC	148	0.24181426050584928	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	125	0.20423501731912946	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	115	0.18789621593359912	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	83	0.13561205149990196	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	74	0.12090713025292464	No Hit
TTTTTTGGGGTTTTAAGGCTGTCTCTTATACACATCTGACGCGTCGTAAGT	71	0.11600548983726554	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	65	0.10620220900594733	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	63	0.10293444872884125	No Hit
TCCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG	62	0.10130056859028821	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACTT	20	6.9810037E-4	45.000004	25
GGATGGC	20	6.9810037E-4	45.000004	9
GTCTTGG	20	6.9810037E-4	45.000004	2
GGGACCC	20	6.9810037E-4	45.000004	7
TGGGTTA	20	6.9810037E-4	45.000004	6
TGGGTAC	20	6.9810037E-4	45.000004	6
GTTGGGT	20	6.9810037E-4	45.000004	4
GTGCTTG	20	6.9810037E-4	45.000004	1
CTGGGTT	25	3.8475366E-5	45.0	5
GTTTTTG	55	1.8189894E-12	45.0	1
TTGGGTA	35	1.1869088E-7	45.0	5
CCTCTGG	25	3.8475366E-5	45.0	2
TGCTTTG	25	3.8475366E-5	45.0	1
ACTGGGA	25	3.8475366E-5	45.0	42
TGGGACA	25	3.8475366E-5	45.0	6
GCTTTTG	25	3.8475366E-5	45.0	1
TTGCTGG	45	3.7289283E-10	45.0	2
TTTCTTG	30	2.1318792E-6	44.999996	1
CGTTTTT	1730	0.0	44.219654	1
CTTGGGA	80	0.0	42.187504	4