##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933591.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 61204 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.023152081563296 33.0 31.0 34.0 30.0 34.0 2 32.24223906934187 34.0 31.0 34.0 30.0 34.0 3 32.29319979086334 33.0 31.0 34.0 30.0 34.0 4 35.87231226717208 37.0 35.0 37.0 35.0 37.0 5 35.97019802627279 37.0 35.0 37.0 35.0 37.0 6 35.972648846480624 37.0 35.0 37.0 35.0 37.0 7 35.94493823933076 37.0 35.0 37.0 35.0 37.0 8 35.819946408731454 37.0 35.0 37.0 35.0 37.0 9 37.629926148617734 39.0 38.0 39.0 35.0 39.0 10 37.273233775570226 39.0 37.0 39.0 34.0 39.0 11 37.26944317364878 39.0 37.0 39.0 34.0 39.0 12 37.28865760407817 39.0 37.0 39.0 34.0 39.0 13 37.21029671263316 39.0 37.0 39.0 34.0 39.0 14 38.42528266126397 40.0 38.0 41.0 34.0 41.0 15 38.44580419580419 40.0 38.0 41.0 34.0 41.0 16 38.5531827985099 40.0 38.0 41.0 34.0 41.0 17 38.58970001960656 40.0 38.0 41.0 34.0 41.0 18 38.13621658715117 39.0 38.0 40.0 34.0 41.0 19 37.616430298673286 38.0 37.0 40.0 34.0 41.0 20 36.91051238481145 38.0 35.0 40.0 34.0 41.0 21 36.80730017645905 37.0 35.0 40.0 33.0 41.0 22 36.777808639958174 37.0 35.0 40.0 33.0 41.0 23 36.65778380498006 37.0 35.0 40.0 33.0 41.0 24 36.53027579896739 37.0 35.0 40.0 33.0 41.0 25 36.484249395464346 37.0 35.0 40.0 33.0 41.0 26 36.44755244755245 37.0 35.0 40.0 33.0 41.0 27 36.35398013201752 37.0 35.0 40.0 33.0 41.0 28 36.25320240507156 37.0 35.0 40.0 33.0 41.0 29 36.00230377099536 37.0 35.0 40.0 32.0 41.0 30 35.5897653748121 36.0 35.0 40.0 30.0 41.0 31 35.14015423828508 36.0 35.0 40.0 29.0 41.0 32 34.574325207502774 36.0 35.0 40.0 23.0 41.0 33 33.76758055029083 36.0 34.0 40.0 18.0 41.0 34 33.16368211228024 37.0 33.0 40.0 15.0 41.0 35 32.75936213319391 36.0 33.0 40.0 10.0 41.0 36 32.37843931769165 36.0 31.0 40.0 10.0 41.0 37 32.12667472714202 36.0 31.0 40.0 10.0 41.0 38 32.005930984902946 36.0 31.0 40.0 10.0 41.0 39 31.954006274099733 36.0 31.0 40.0 9.0 41.0 40 31.747565518593557 35.0 30.0 40.0 8.0 41.0 41 31.58911182275668 35.0 30.0 40.0 8.0 41.0 42 31.336987778576564 35.0 29.0 40.0 8.0 41.0 43 31.11196980589504 35.0 28.0 40.0 8.0 41.0 44 30.920479053656624 35.0 27.0 40.0 7.0 41.0 45 30.90436899549049 35.0 26.0 40.0 7.0 41.0 46 30.654744787922358 35.0 26.0 39.0 7.0 41.0 47 30.582265864976144 35.0 26.0 39.0 7.0 41.0 48 30.432406378668063 35.0 25.0 39.0 7.0 41.0 49 30.424122606365597 35.0 26.0 39.0 7.0 41.0 50 30.22539376511339 35.0 24.0 39.0 7.0 41.0 51 29.421965884582708 35.0 23.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 3.0 12 4.0 13 1.0 14 5.0 15 5.0 16 10.0 17 21.0 18 32.0 19 68.0 20 96.0 21 162.0 22 287.0 23 468.0 24 823.0 25 1571.0 26 2414.0 27 2587.0 28 2321.0 29 2058.0 30 1861.0 31 1907.0 32 1983.0 33 2373.0 34 3319.0 35 5221.0 36 6328.0 37 6603.0 38 10404.0 39 8263.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.346774720606497 5.073197830207176 34.04842820730671 41.53159924187961 2 46.809032089405925 4.400039213123326 33.88667407358996 14.904254623880792 3 16.30285602248219 5.189203320044442 62.87824325207503 15.62969740539834 4 13.374942814195151 5.065028429514411 62.97954382066532 18.580484935625122 5 10.558133455329717 5.734919286321156 65.18364812757336 18.523299130775765 6 14.386314619959482 6.249591529965362 68.083785373505 11.28030847657016 7 53.8722959283707 2.76125743415463 38.65433631788772 4.712110319586955 8 52.98019737272074 2.8870662048232143 38.45173518070714 5.681001241748905 9 48.57525651918175 5.148356316580616 40.22286125089863 6.053525913338998 10 23.20109796745311 17.977583164499052 45.19966015293118 13.621658715116657 11 16.222795895693093 16.00548983726554 49.63237696882557 18.139337298215803 12 15.020260113718056 12.816155806810011 55.30684269002026 16.85674138945167 13 17.240703222011632 14.566041435200313 55.64015423828508 12.553101104502973 14 14.670609764067708 16.936801516240767 54.36409385007516 14.028494869616365 15 10.89307888373309 15.404221946278021 56.48650415005555 17.216195019933338 16 10.453565126462323 15.090516959675837 54.28239984314751 20.173518070714334 17 11.03849421606431 14.907522384157899 52.20083654663094 21.853146853146853 18 11.747598196196327 14.123259917652442 55.298673289327496 18.83046859682374 19 12.172407032220116 16.065943402391998 55.77249852950787 15.989151035880008 20 12.90111757401477 18.564146134239593 53.388667407358994 15.14606888438664 21 12.02372393961179 19.199725508136723 53.62558002744918 15.150970524802302 22 10.4682700477093 18.087053133782106 51.66328998104699 19.781386837461604 23 10.43069080452258 18.908894843474283 49.71243709561467 20.947977256388473 24 11.458401411672439 18.4595778053722 50.12417489053003 19.957845892425333 25 11.26396967518463 19.753610875106205 48.219070648977194 20.76334880073198 26 10.731324750016338 20.676753153388667 50.19769949676491 18.394222599830076 27 11.696947911901184 19.426834847395593 51.87569439905888 17.000522841644337 28 11.051565257172733 16.791386183909548 51.305470230703875 20.851578328213844 29 13.788314489249068 15.46304163126593 50.89373243578851 19.85491144369649 30 16.734200379060194 17.39428795503562 49.132409646428336 16.73910201947585 31 15.97444611463303 22.340043134435657 43.734069668649106 17.951441082282205 32 16.041435200313707 22.377622377622377 42.08221684857199 19.498725573491928 33 17.69492190052938 19.202993268413827 42.02339716358408 21.078687667472714 34 17.83706947258349 19.90882948826874 39.847068819031435 22.40703222011633 35 20.9920920201294 20.292791320828705 38.58734723220705 20.127769426834845 36 21.201228677864194 20.820534605581333 41.17214561139795 16.806091105156526 37 18.15404221946278 22.049212469773217 39.90425462388079 19.89249068688321 38 20.58688974576825 21.30252924645448 37.34559832690674 20.76498268087053 39 22.323704333050127 20.03790601921443 39.97614534997712 17.662244297758317 40 19.781386837461604 23.759884974838247 40.11992680216979 16.338801385530356 41 18.214495784589243 27.44428468727534 36.76066923730475 17.580550290830665 42 22.00836546630939 23.536043395856478 37.048232141690086 17.407358996144044 43 22.402130579700675 18.7830860728057 40.05457159662767 18.760211750865956 44 19.787922358015816 17.600156852493303 40.028429514410824 22.58349127508006 45 21.521469185020585 17.810927390366643 38.992549506568196 21.675053918044572 46 20.76334880073198 20.358146526370827 41.47277955689171 17.40572511600549 47 16.828965427096268 23.696163649434677 42.47761584210183 16.99725508136723 48 17.600156852493303 21.34501013005686 42.992288085746026 18.062544931703812 49 20.55257826285864 17.245604862427292 44.07228285732959 18.129534017384486 50 19.25200967257042 16.32899810469904 40.887850467289724 23.53114175544082 51 17.245604862427292 16.623096529638588 38.582445591791384 27.548853016142736 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 178.0 1 320.5 2 463.0 3 4021.0 4 7579.0 5 4636.0 6 1693.0 7 1591.0 8 1489.0 9 1427.0 10 1365.0 11 1354.5 12 1344.0 13 1279.5 14 1215.0 15 1072.0 16 929.0 17 879.5 18 830.0 19 735.0 20 640.0 21 585.0 22 530.0 23 477.0 24 424.0 25 395.5 26 377.0 27 387.0 28 398.5 29 410.0 30 444.0 31 478.0 32 480.0 33 482.0 34 553.5 35 625.0 36 661.0 37 697.0 38 825.0 39 953.0 40 1221.5 41 1490.0 42 1940.5 43 2391.0 44 2754.0 45 3117.0 46 3910.0 47 4703.0 48 5756.5 49 6810.0 50 6730.0 51 6650.0 52 5522.5 53 4395.0 54 3413.0 55 2431.0 56 1936.0 57 1441.0 58 1265.0 59 1089.0 60 985.0 61 881.0 62 813.0 63 745.0 64 685.5 65 626.0 66 511.5 67 397.0 68 345.0 69 293.0 70 265.5 71 238.0 72 215.0 73 192.0 74 143.5 75 84.5 76 74.0 77 52.0 78 30.0 79 24.0 80 18.0 81 14.5 82 11.0 83 7.0 84 3.0 85 3.5 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 61204.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.22802431213646 #Duplication Level Percentage of deduplicated Percentage of total 1 81.2456636601377 49.74511469838573 2 10.44190638842931 12.786745964316056 3 3.8506697977264235 7.073067119796092 4 1.7372044617601536 4.254623880792105 5 0.8992901745210012 2.7530880334618653 6 0.44831082884133 1.64695117966146 7 0.33890163846933874 1.4525194431736488 8 0.19480172919891123 0.9541860009149729 9 0.1334258419170625 0.735246062348866 >10 0.6564551422319475 6.540422194627802 >50 0.029353685221753748 1.1339128161558067 >100 0.02134813470673 2.6910005881968497 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.00266851683834125 8.233122018168746 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5039 8.233122018168746 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCC 376 0.6143389320959415 No Hit CTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGCT 261 0.4264427161623423 No Hit CCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 259 0.4231749558852363 No Hit TCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 182 0.29736618521665253 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGC 181 0.2957323050780995 No Hit GCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 148 0.24181426050584928 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 125 0.20423501731912946 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 115 0.18789621593359912 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 83 0.13561205149990196 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 74 0.12090713025292464 No Hit TTTTTTGGGGTTTTAAGGCTGTCTCTTATACACATCTGACGCGTCGTAAGT 71 0.11600548983726554 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 65 0.10620220900594733 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 63 0.10293444872884125 No Hit TCCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG 62 0.10130056859028821 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4525847983791909 0.0 2 0.0 0.0 0.0 1.506437487745899 0.0 3 0.0 0.0 0.0 2.155087902751454 0.0 4 0.0 0.0 0.0 3.0896673420037906 0.0 5 0.0 0.0 0.0 4.94085353898438 0.0 6 0.0 0.0 0.0 6.363963139664074 0.0 7 0.0 0.0 0.0 7.698843212861904 0.0 8 0.0 0.0 0.0 9.517351807071433 0.0 9 0.0 0.0 0.0 10.375138879811777 0.0 10 0.0 0.0 0.0 12.494281419515064 0.0 11 0.0 0.0 0.0 17.632834455264362 0.0 12 0.0 0.0 0.0 22.17992288085746 0.0 13 0.0 0.0 0.0 23.753349454284034 0.0 14 0.0 0.0 0.0 24.28926213972943 0.0 15 0.0 0.0 0.0 25.039213123325272 0.0 16 0.0 0.0 0.0 26.919809162799815 0.0 17 0.0 0.0 0.0 29.251356120515 0.0 18 0.0 0.0 0.0 31.319848375923144 0.0 19 0.0 0.0 0.0 32.62368472648846 0.0 20 0.0 0.0 0.0 33.77720410430691 0.0 21 0.0 0.0 0.0 35.185608783739625 0.0 22 0.0 0.0 0.0 36.25253251421476 0.0 23 0.0 0.0 0.0 37.04169662113588 0.0 24 0.0 0.0 0.0 37.50571858048494 0.0 25 0.0 0.0 0.0 37.77694268348474 0.0 26 0.0 0.0 0.0 37.989347101496634 0.0 27 0.0 0.0 0.0 38.16253839618326 0.0 28 0.0 0.0 0.0 38.324292529900006 0.0 29 0.0 0.0 0.0 38.49421606430952 0.0 30 0.0 0.0 0.0 38.655970198026274 0.0 31 0.0 0.0 0.0 38.79975165021894 0.0 32 0.0 0.0 0.0 38.93536370171884 0.0 33 0.0 0.0 0.0 39.05790471211032 0.0 34 0.0 0.0 0.0 39.19841840402588 0.0 35 0.0 0.0 0.0 39.33239657538723 0.0 36 0.0 0.0 0.0 39.44186654467028 0.0 37 0.0 0.0 0.0 39.58238023658584 0.0 38 0.0 0.0 0.0 39.71635840794719 0.0 39 0.0 0.0 0.0 39.84870269916999 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCAACTT 20 6.9810037E-4 45.000004 25 GGATGGC 20 6.9810037E-4 45.000004 9 GTCTTGG 20 6.9810037E-4 45.000004 2 GGGACCC 20 6.9810037E-4 45.000004 7 TGGGTTA 20 6.9810037E-4 45.000004 6 TGGGTAC 20 6.9810037E-4 45.000004 6 GTTGGGT 20 6.9810037E-4 45.000004 4 GTGCTTG 20 6.9810037E-4 45.000004 1 CTGGGTT 25 3.8475366E-5 45.0 5 GTTTTTG 55 1.8189894E-12 45.0 1 TTGGGTA 35 1.1869088E-7 45.0 5 CCTCTGG 25 3.8475366E-5 45.0 2 TGCTTTG 25 3.8475366E-5 45.0 1 ACTGGGA 25 3.8475366E-5 45.0 42 TGGGACA 25 3.8475366E-5 45.0 6 GCTTTTG 25 3.8475366E-5 45.0 1 TTGCTGG 45 3.7289283E-10 45.0 2 TTTCTTG 30 2.1318792E-6 44.999996 1 CGTTTTT 1730 0.0 44.219654 1 CTTGGGA 80 0.0 42.187504 4 >>END_MODULE