##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933590.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 224520 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53114199180474 33.0 31.0 34.0 31.0 34.0 2 32.68462052378407 34.0 31.0 34.0 31.0 34.0 3 32.776581150899695 34.0 31.0 34.0 31.0 34.0 4 36.213148049171565 37.0 35.0 37.0 35.0 37.0 5 36.20100659184037 37.0 35.0 37.0 35.0 37.0 6 36.158849991092104 37.0 36.0 37.0 35.0 37.0 7 36.19912257259932 37.0 37.0 37.0 35.0 37.0 8 36.080616426153576 37.0 37.0 37.0 35.0 37.0 9 37.94699804026367 39.0 38.0 39.0 35.0 39.0 10 37.521013718154286 39.0 37.0 39.0 35.0 39.0 11 37.42386424371993 39.0 37.0 39.0 35.0 39.0 12 37.29824959914484 39.0 37.0 39.0 34.0 39.0 13 37.214577765900586 39.0 37.0 39.0 34.0 39.0 14 38.2366470693034 40.0 38.0 41.0 33.0 41.0 15 38.37686620345626 40.0 38.0 41.0 33.0 41.0 16 38.51643060751826 40.0 38.0 41.0 34.0 41.0 17 38.50154551933013 40.0 38.0 41.0 34.0 41.0 18 38.24865490824871 39.0 38.0 41.0 34.0 41.0 19 37.997376625690364 39.0 37.0 41.0 34.0 41.0 20 37.65896579369321 39.0 35.0 41.0 34.0 41.0 21 37.54738107963656 39.0 35.0 41.0 33.0 41.0 22 37.56648405487262 39.0 35.0 41.0 34.0 41.0 23 37.49310529128808 39.0 35.0 41.0 34.0 41.0 24 37.38809460181721 39.0 35.0 41.0 34.0 41.0 25 37.31117940495279 39.0 35.0 41.0 33.0 41.0 26 37.23354266880456 39.0 35.0 41.0 33.0 41.0 27 37.14185818635311 39.0 35.0 41.0 33.0 41.0 28 36.99408961339747 39.0 35.0 41.0 33.0 41.0 29 36.85487707108498 38.0 35.0 40.0 33.0 41.0 30 36.658502583288794 38.0 35.0 40.0 32.0 41.0 31 36.4014608943524 38.0 35.0 40.0 31.0 41.0 32 36.0748797434527 38.0 35.0 41.0 30.0 41.0 33 35.73799661500089 38.0 35.0 41.0 29.0 41.0 34 35.36520131836807 38.0 35.0 41.0 25.0 41.0 35 35.06465793693212 38.0 35.0 41.0 23.0 41.0 36 34.87862996615001 38.0 35.0 40.0 22.0 41.0 37 34.767374844111885 38.0 34.0 40.0 22.0 41.0 38 34.672790842686624 38.0 34.0 40.0 21.0 41.0 39 34.60578567610903 38.0 34.0 40.0 21.0 41.0 40 34.43983609477998 38.0 34.0 40.0 20.0 41.0 41 34.26625690361661 38.0 34.0 40.0 18.0 41.0 42 34.10612862996615 37.0 34.0 40.0 18.0 41.0 43 33.98378763584536 37.0 34.0 40.0 18.0 41.0 44 33.82519597363264 37.0 33.0 40.0 18.0 41.0 45 33.792156600748264 37.0 33.0 40.0 18.0 41.0 46 33.65383930162124 36.0 33.0 40.0 18.0 41.0 47 33.51530375913059 36.0 33.0 40.0 18.0 41.0 48 33.42630946018172 36.0 33.0 40.0 18.0 41.0 49 33.379894886869764 35.0 33.0 40.0 18.0 41.0 50 33.27921343310173 35.0 33.0 40.0 18.0 41.0 51 32.25544717619811 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 5.0 11 3.0 12 5.0 13 8.0 14 9.0 15 10.0 16 24.0 17 40.0 18 69.0 19 125.0 20 193.0 21 351.0 22 569.0 23 940.0 24 1709.0 25 2974.0 26 4747.0 27 5230.0 28 5095.0 29 4679.0 30 4646.0 31 5006.0 32 6030.0 33 8778.0 34 15400.0 35 16674.0 36 21279.0 37 27541.0 38 45366.0 39 47000.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.555763406378052 5.375022269730981 37.560128273650456 30.509086050240512 2 34.22724033493675 5.512649207197577 44.18359166221272 16.07651879565295 3 20.54159985747372 5.494833422412257 56.98111526812756 16.98245145198646 4 16.652414038838412 5.576340637805095 57.019419205416 20.751826117940496 5 15.658293247817568 6.488954213433101 56.35711740602174 21.495635132727596 6 19.517192232317836 7.426064493140923 58.25271690717976 14.804026367361484 7 71.06850169249955 2.939159094958133 21.47247461250668 4.519864600035631 8 71.86264029930518 3.4148405487261715 20.646712987707108 4.075806164261535 9 66.96240869410298 5.042312488865135 22.680830215570996 5.314448601460894 10 36.18964902903973 20.0445394619633 28.619722073757348 15.146089435239624 11 27.080438268305716 20.35720648494566 34.380901478710136 18.181453768038484 12 22.967664350614644 18.531979333689648 39.617406021735256 18.882950293960448 13 22.631391412791736 18.613486549082488 41.178514163548904 17.576607874576876 14 19.234812043470516 19.302957420274364 43.547122750757175 17.915107785497952 15 17.885711740602172 18.042045252093356 44.177356137537856 19.894886869766612 16 21.116158916800284 18.13958667379298 41.056476037769464 19.687778371637272 17 20.672545875645824 18.76135756280064 39.12791733475859 21.43817922679494 18 21.86798503474078 18.235346517014076 40.02583288793871 19.870835560306432 19 21.079191163370748 20.977641190094424 38.41350436486727 19.52966328166756 20 21.794494922501336 23.574737217174416 36.85907714234812 17.771690717976128 21 20.782558346695172 23.817922679494032 38.00062355246749 17.398895421343312 22 20.49973276322822 20.47300908605024 38.03714591127739 20.990112239444148 23 19.002761446641724 23.0264564404062 37.44343488330661 20.527347229645464 24 18.83529306965972 23.77917334758596 37.38776055585248 19.997773026901836 25 20.95002672367718 23.663816141101016 34.601817210048104 20.784339925173704 26 19.642348120434704 22.642526278282556 35.857830037413144 21.857295563869588 27 19.431231070728668 21.460448957776592 37.742740067699984 21.365579903794764 28 18.180117584179584 23.391680028505256 36.08141813646891 22.346784250846248 29 19.91849278460716 22.738731516123284 35.634241938357384 21.708533760912168 30 21.844379119900232 22.228754676643504 36.58738642437199 19.339479779084268 31 22.067967218955996 24.35328701229289 34.102975236059144 19.475770532691968 32 22.0154106538393 23.374309638339568 33.47006948156066 21.140210226260468 33 22.66924995546054 23.293693212186 31.081863531088544 22.95519330126492 34 21.031533939070016 23.87716016390522 33.81525031177623 21.27605558524853 35 21.04667735613754 25.862729378229112 32.434972385533584 20.655620880099768 36 22.976572243007304 27.307589524318548 30.238286121503656 19.477552111170496 37 21.521022626046676 27.192677712453232 30.231605202209156 21.054694459290932 38 23.191252449670408 25.747372171744164 29.373329770176376 21.688045608409052 39 23.371191876002136 24.673080349189384 28.315517548548012 23.640210226260468 40 25.41199002316052 23.469178692321396 29.68466060929984 21.43417067521824 41 22.36281845715304 25.326028861571352 28.977819347942273 23.333333333333332 42 22.03723499020132 26.391858186353108 30.708622839836096 20.86228398360948 43 21.127293782291108 24.833867806876896 32.664350614644576 21.37448779618742 44 22.5432032781044 23.81925886335293 31.29520755389275 22.34233030464992 45 22.61045786566898 22.994388027792624 30.15766969535008 24.237484411188312 46 22.182879030821308 23.576518795652948 31.19098521289863 23.049616960627116 47 19.92740067699982 26.474256190985212 33.00908605024051 20.589257081774452 48 20.567432745412436 26.441742383752004 31.965526456440408 21.025298414395156 49 22.46570461428826 24.35016924995546 31.731248886513452 21.45287724924283 50 20.75004453946196 24.35774095848922 31.15446285408872 23.737751647960092 51 20.450293960448956 24.221450204881524 29.688223766256904 25.640032068412616 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 633.0 1 888.0 2 1143.0 3 6787.5 4 12432.0 5 7671.5 6 2911.0 7 2860.0 8 2809.0 9 2823.5 10 2838.0 11 2781.0 12 2724.0 13 2538.0 14 2352.0 15 2163.0 16 1974.0 17 1907.0 18 1840.0 19 1758.5 20 1677.0 21 1625.0 22 1573.0 23 1572.0 24 1571.0 25 1656.0 26 1854.0 27 1967.0 28 2097.5 29 2228.0 30 2643.0 31 3058.0 32 3225.5 33 3393.0 34 3807.0 35 4221.0 36 4300.0 37 4379.0 38 4891.5 39 5404.0 40 5803.0 41 6202.0 42 7050.0 43 7898.0 44 8656.0 45 9414.0 46 11631.5 47 13849.0 48 15877.5 49 17906.0 50 18518.5 51 19131.0 52 17900.0 53 16669.0 54 15052.0 55 13435.0 56 12497.5 57 11560.0 58 10978.5 59 10397.0 60 9664.5 61 8932.0 62 7909.5 63 6887.0 64 6299.0 65 5711.0 66 4987.0 67 4263.0 68 3572.0 69 2881.0 70 2504.5 71 2128.0 72 1819.5 73 1511.0 74 1413.0 75 1031.5 76 748.0 77 593.5 78 439.0 79 327.5 80 216.0 81 158.0 82 100.0 83 61.0 84 22.0 85 22.0 86 22.0 87 14.5 88 7.0 89 5.0 90 3.0 91 2.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 224520.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.192700745829455 #Duplication Level Percentage of deduplicated Percentage of total 1 68.08676663372502 31.45111635862786 2 12.416325918500162 11.47087255031928 3 6.377044196464461 8.83718682630634 4 3.961105844567042 7.3189670760256575 5 2.621514936029307 6.054742747036202 6 1.830549093252862 5.0734803879107355 7 1.2623086960589407 4.0816613492136185 8 0.8628438354109936 3.1885669663619005 9 0.61717301513427 2.5657999556848754 >10 1.9004534733727423 12.912496670645101 >50 0.04094513526332139 1.284283903054064 >100 0.019973236713815314 1.5915156126208765 >500 0.0019973236713815316 0.5005201274474351 >1k 0.0 0.0 >5k 9.986618356907658E-4 3.668789468746038 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7953 3.542223409941208 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 562 0.2503117762337431 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCC 523 0.2329413860680563 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 437 0.19463744877961875 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 297 0.13228220203099947 No Hit CCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTGC 280 0.12471049349723855 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 274 0.12203812577944058 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0681453768038482 0.0 2 0.0 0.0 0.0 0.3295920185284162 0.0 3 0.0 0.0 0.0 0.5037413148049171 0.0 4 0.0 0.0 0.0 0.7901300552289329 0.0 5 0.0 0.0 0.0 1.5187956529485125 0.0 6 0.0 0.0 0.0 2.4719401389631215 0.0 7 0.0 0.0 0.0 3.3132905754498485 0.0 8 0.0 0.0 0.0 4.559504721182968 0.0 9 0.0 0.0 0.0 5.412435417780153 0.0 10 0.0 0.0 0.0 6.74594690896134 0.0 11 0.0 0.0 0.0 8.95154106538393 0.0 12 0.0 0.0 0.0 10.61731694281133 0.0 13 0.0 0.0 0.0 11.319704257972564 0.0 14 0.0 0.0 0.0 11.67022982362373 0.0 15 0.0 0.0 0.0 12.054159985747372 0.0 16 0.0 0.0 0.0 12.66791377160164 0.0 17 0.0 0.0 0.0 13.43087475503296 0.0 18 0.0 0.0 0.0 14.116337074648138 0.0 19 0.0 0.0 0.0 14.5612862996615 0.0 20 0.0 0.0 0.0 14.971940138963122 0.0 21 0.0 0.0 0.0 15.422679494031712 0.0 22 0.0 0.0 0.0 15.85649385355425 0.0 23 0.0 0.0 0.0 16.161589168002852 0.0 24 0.0 0.0 0.0 16.39363976483164 0.0 25 0.0 0.0 0.0 16.550864065562088 0.0 26 0.0 0.0 0.0 16.717441653304828 0.0 27 0.0 0.0 0.0 16.929449492250132 0.0 28 0.0 0.0 0.0 17.09424550151434 0.0 29 0.0 0.0 0.0 17.315161232852308 0.0 30 0.0 0.0 0.0 17.547211829681096 0.0 31 0.0 0.0 0.0 17.70978086584714 0.0 32 0.0 0.0 0.0 17.939159094958132 0.0 33 0.0 0.0 0.0 18.101728131124176 0.0 34 0.0 0.0 0.0 18.299037947621592 0.0 35 0.0 0.0 0.0 18.527079992873688 0.0 36 0.0 0.0 0.0 18.714145733119544 0.0 37 0.0 0.0 0.0 18.902993051843932 0.0 38 0.0 0.0 0.0 19.17468376982006 0.0 39 0.0 0.0 0.0 19.792000712631392 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGCC 25 3.880749E-5 45.0 20 CATAGCC 25 3.880749E-5 45.0 36 AATTATC 20 7.0211507E-4 45.0 45 CTGTCGG 30 2.1576761E-6 44.999996 2 TACGGGA 30 2.1576761E-6 44.999996 4 TACGAAT 30 2.1576761E-6 44.999996 12 GCTACGA 30 2.1576761E-6 44.999996 10 CCTATGC 30 2.1576761E-6 44.999996 35 AGCTACG 30 2.1576761E-6 44.999996 9 CGTTTTT 2940 0.0 43.469387 1 GCATTAG 55 6.002665E-11 40.909092 16 CGACCAA 205 0.0 40.609756 29 CGTGCGG 50 1.0732037E-9 40.5 2 ACGTGAG 185 0.0 40.135136 44 AACACGT 185 0.0 40.135136 41 GAGACAC 215 0.0 39.767445 23 GACACGA 210 0.0 39.642857 25 ATGGTCA 210 0.0 39.642857 13 ACGACCA 210 0.0 39.642857 28 AAACACG 205 0.0 39.512196 40 >>END_MODULE