##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933589.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 214486 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5141547700083 33.0 31.0 34.0 31.0 34.0 2 32.69051126880076 34.0 31.0 34.0 31.0 34.0 3 32.77233012877297 34.0 31.0 34.0 31.0 34.0 4 36.17194129220555 37.0 35.0 37.0 35.0 37.0 5 36.20212974273379 37.0 35.0 37.0 35.0 37.0 6 36.17526551849538 37.0 37.0 37.0 35.0 37.0 7 36.15706386430816 37.0 37.0 37.0 35.0 37.0 8 36.08380500358998 37.0 37.0 37.0 35.0 37.0 9 37.96920078699775 39.0 38.0 39.0 35.0 39.0 10 37.574722825732216 39.0 37.0 39.0 35.0 39.0 11 37.491579870014824 39.0 37.0 39.0 35.0 39.0 12 37.33457195341421 39.0 37.0 39.0 35.0 39.0 13 37.27148158854191 39.0 37.0 39.0 34.0 39.0 14 38.31839840362541 40.0 38.0 41.0 34.0 41.0 15 38.45052823960538 40.0 38.0 41.0 34.0 41.0 16 38.639025390934606 40.0 38.0 41.0 34.0 41.0 17 38.643911490726666 40.0 38.0 41.0 35.0 41.0 18 38.44167451488675 39.0 38.0 41.0 35.0 41.0 19 38.220182203034234 40.0 37.0 41.0 35.0 41.0 20 37.84201299851738 39.0 35.0 41.0 34.0 41.0 21 37.78422367893476 39.0 35.0 41.0 34.0 41.0 22 37.795170780377276 39.0 35.0 41.0 34.0 41.0 23 37.660905606892754 39.0 35.0 41.0 34.0 41.0 24 37.56564064787445 39.0 35.0 41.0 34.0 41.0 25 37.48927668938765 39.0 35.0 41.0 34.0 41.0 26 37.42696959242095 39.0 35.0 41.0 34.0 41.0 27 37.3407634997156 39.0 35.0 41.0 34.0 41.0 28 37.239055229711965 39.0 35.0 41.0 33.0 41.0 29 37.06033494027582 39.0 35.0 41.0 33.0 41.0 30 36.81624441688502 39.0 35.0 41.0 33.0 41.0 31 36.54774670607872 39.0 35.0 41.0 32.0 41.0 32 36.28255923463536 39.0 35.0 41.0 31.0 41.0 33 35.89631024868756 39.0 35.0 41.0 29.0 41.0 34 35.56109955894557 39.0 35.0 41.0 26.0 41.0 35 35.30680324123719 39.0 35.0 41.0 23.0 41.0 36 35.11455293119364 38.0 35.0 41.0 23.0 41.0 37 35.019045532109324 38.0 35.0 41.0 23.0 41.0 38 34.908408940443664 38.0 35.0 41.0 22.0 41.0 39 34.8698563076378 38.0 35.0 41.0 22.0 41.0 40 34.724336320319274 38.0 35.0 41.0 21.0 41.0 41 34.55314099754762 38.0 35.0 41.0 20.0 41.0 42 34.38265434573818 38.0 34.0 40.0 20.0 41.0 43 34.29310071519819 37.0 34.0 40.0 20.0 41.0 44 34.14818682804472 37.0 34.0 40.0 18.0 41.0 45 34.034650280204765 37.0 34.0 40.0 20.0 41.0 46 33.89885586938075 37.0 34.0 40.0 19.0 41.0 47 33.840474436559965 36.0 34.0 40.0 20.0 41.0 48 33.722438760571784 36.0 34.0 40.0 18.0 41.0 49 33.69277248864728 36.0 34.0 40.0 18.0 41.0 50 33.52594574937292 35.0 33.0 40.0 18.0 41.0 51 32.662998983616646 35.0 32.0 39.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 6.0 11 6.0 12 10.0 13 16.0 14 11.0 15 19.0 16 16.0 17 43.0 18 55.0 19 104.0 20 184.0 21 313.0 22 474.0 23 838.0 24 1534.0 25 2822.0 26 4191.0 27 4927.0 28 4787.0 29 4182.0 30 4053.0 31 4447.0 32 5396.0 33 7819.0 34 14160.0 35 15247.0 36 19334.0 37 25088.0 38 43669.0 39 50711.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.699178501160915 5.500592113238159 37.504079520341655 30.29614986525927 2 34.360750818235225 5.4884701099372455 44.0760702330222 16.07470883880533 3 20.675475322398665 5.547215202857063 56.80184254450174 16.975466930242533 4 16.906930988502747 5.622744608039685 56.59530225749 20.87502214596757 5 15.529684921160355 6.585977639566219 56.38829573958207 21.496041699691354 6 19.600813106682953 7.392557089973238 58.090970972464405 14.915658830879405 7 71.28017679475583 2.9377208768870693 21.275980716690135 4.506121611666962 8 72.12825079492367 3.430526934158873 20.499706274535402 3.941515996382048 9 67.2318939231465 5.0935725408651376 22.45507865315219 5.2194548828361755 10 36.116110142386916 20.19246011394683 28.626110795110172 15.065318948556083 11 27.00409350726854 20.699253098104307 34.126702908348335 18.169950486278825 12 23.00616357244762 18.82080881735871 39.44126889400707 18.731758716186604 13 22.984716951222925 18.7872401928331 40.97050623350708 17.257536622436895 14 19.49171507697472 19.423179135234932 43.16878490903836 17.916320878751993 15 18.011898212470744 18.336861147114497 44.02338614175284 19.627854498661918 16 21.34032058036422 18.190464645711142 40.955586844829035 19.513627929095605 17 20.707645254235707 18.875824063109015 39.10465018695859 21.311880495696688 18 22.049457773467733 18.32473914381358 39.676715496582524 19.94908758613616 19 21.227958934382663 20.806019973331594 38.411364844325504 19.55465624796024 20 22.16088695765691 23.665880290555094 36.523595945656126 17.64963680613187 21 21.190194231791352 23.50642932405845 37.99548688492489 17.307889559225313 22 20.818608207528698 20.42277817666421 37.83277230215492 20.925841313652175 23 19.49824230952137 22.60287384724411 37.59732569957946 20.301558143655065 24 19.080499426535997 23.805749559411804 37.25417975998433 19.859571254067866 25 21.24241209216452 23.564241955185885 34.5444457913337 20.64890016131589 26 19.77052115289576 22.67001109629533 35.589269229693315 21.9701985211156 27 19.470734686646214 21.602342344022453 37.75164812621803 21.175274843113304 28 18.247344815046205 23.46726592877857 35.92402301315703 22.361366243018193 29 19.873091950057347 22.954411942970637 35.57201868653432 21.6004774204377 30 22.105871711906605 22.221963205057673 36.41916022490979 19.253004858125937 31 22.17067780647688 24.349374784368212 34.10851990339696 19.37142750575795 32 21.91611573715767 23.401993603312103 33.457195341420885 21.22469531810934 33 22.95347948117826 23.204777934224143 30.917169418983057 22.92457316561454 34 21.095083128968792 23.939091595721866 33.73180533927622 21.23401993603312 35 21.12492190632489 25.834320188730263 32.38020197122423 20.660555933720616 36 22.884477308542284 27.466594556288054 30.149287132959728 19.499641002209934 37 21.617727963596693 26.956071724961067 30.299413481532593 21.126786829909644 38 23.13064722173009 25.838982497692157 29.446210941506674 21.584159339071082 39 23.578228882071556 24.707440112641386 28.054045485486235 23.660285519800826 40 25.31587143216807 23.709239763900676 29.46579263914661 21.509096164784648 41 22.310547075333588 25.513553332152217 28.748263289911698 23.4276363026025 42 22.23222028477383 26.552781999757556 30.562367706983206 20.652630008485403 43 21.060582042650804 25.0594444392641 32.5303283197971 21.349645198288002 44 22.546926139701426 24.17080835112781 31.138629094672847 22.143636414497916 45 22.650895629551577 23.25466464011637 29.91057691411094 24.183862816221104 46 22.126385871338922 23.7083073021083 31.03465960482269 23.13064722173009 47 19.836259709258414 26.5509170761728 33.08794047163918 20.52488274292961 48 20.54306574788098 26.82086476506625 31.948938392249378 20.68713109480339 49 22.469531810934047 24.66687802467294 31.484106188748918 21.3794839756441 50 20.80788489691635 24.652424866891078 31.025801217795102 23.51388901839747 51 20.75986311460888 24.323732085077815 29.568829667204387 25.34757513310892 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 566.0 1 898.0 2 1230.0 3 6472.5 4 11715.0 5 7294.5 6 2874.0 7 2744.0 8 2614.0 9 2620.0 10 2626.0 11 2585.5 12 2545.0 13 2442.0 14 2339.0 15 2168.0 16 1997.0 17 1918.0 18 1839.0 19 1714.0 20 1589.0 21 1529.0 22 1469.0 23 1492.0 24 1515.0 25 1592.5 26 1847.5 27 2025.0 28 2082.0 29 2139.0 30 2560.0 31 2981.0 32 3152.5 33 3324.0 34 3676.5 35 4029.0 36 4104.0 37 4179.0 38 4668.0 39 5157.0 40 5597.0 41 6037.0 42 6796.5 43 7556.0 44 8203.0 45 8850.0 46 10879.5 47 12909.0 48 14754.0 49 16599.0 50 17260.0 51 17921.0 52 16793.0 53 15665.0 54 14232.5 55 12800.0 56 12008.0 57 11216.0 58 10522.0 59 9828.0 60 9312.5 61 8797.0 62 7690.5 63 6584.0 64 6158.5 65 5733.0 66 4970.0 67 4207.0 68 3525.5 69 2844.0 70 2509.0 71 2174.0 72 1813.0 73 1452.0 74 1388.5 75 1059.5 76 794.0 77 614.0 78 434.0 79 317.5 80 201.0 81 145.0 82 89.0 83 59.5 84 30.0 85 19.0 86 8.0 87 5.5 88 3.0 89 2.5 90 2.0 91 3.5 92 5.0 93 2.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 214486.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.84449648010982 #Duplication Level Percentage of deduplicated Percentage of total 1 69.73197947912513 33.36291446740092 2 11.779837056833069 11.27200745203834 3 6.126628933266346 8.79376429297802 4 3.8563360269169524 7.380178218637952 5 2.4699032496259954 5.908563866647137 6 1.6852503925935118 4.837797388592638 7 1.1604837580666307 3.886593275463047 8 0.820634937754451 3.141029231267837 9 0.5427585519196805 2.337120866418359 >10 1.7672138485889797 12.364215854253379 >50 0.03698354773630191 1.1812335870659272 >100 0.020990662228711893 1.988967809152709 >500 0.0 0.0 >1k 0.0 0.0 >5k 9.995553442243758E-4 3.545613690083718 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7414 3.4566358643454587 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 486 0.22658821554786793 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCC 463 0.21586490493552024 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 366 0.1706405080051845 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 328 0.1529237339500014 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 288 0.13427449810244024 No Hit CCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGCCGTCTTCTGC 268 0.12494988017865968 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTATCGCGATCGTATGC 232 0.10816556791585465 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07040086532454333 0.0 2 0.0 0.0 0.0 0.31284093134283825 0.0 3 0.0 0.0 0.0 0.47928536128232146 0.0 4 0.0 0.0 0.0 0.7347798923939092 0.0 5 0.0 0.0 0.0 1.4327275439888851 0.0 6 0.0 0.0 0.0 2.3236947866061186 0.0 7 0.0 0.0 0.0 3.087380994563748 0.0 8 0.0 0.0 0.0 4.207733838105984 0.0 9 0.0 0.0 0.0 4.974683662336936 0.0 10 0.0 0.0 0.0 6.166836063892282 0.0 11 0.0 0.0 0.0 8.283524332590472 0.0 12 0.0 0.0 0.0 9.83980306406945 0.0 13 0.0 0.0 0.0 10.479471853640797 0.0 14 0.0 0.0 0.0 10.81888794606641 0.0 15 0.0 0.0 0.0 11.150844344152999 0.0 16 0.0 0.0 0.0 11.740626427832119 0.0 17 0.0 0.0 0.0 12.448831159143253 0.0 18 0.0 0.0 0.0 13.121136111447834 0.0 19 0.0 0.0 0.0 13.536547839952258 0.0 20 4.662308961890287E-4 0.0 0.0 13.983197038501347 0.0 21 4.662308961890287E-4 0.0 0.0 14.440103316766596 0.0 22 4.662308961890287E-4 0.0 0.0 14.861576046921478 0.0 23 4.662308961890287E-4 0.0 0.0 15.16695728392529 0.0 24 4.662308961890287E-4 0.0 0.0 15.3790923416913 0.0 25 4.662308961890287E-4 0.0 0.0 15.526421304887032 0.0 26 4.662308961890287E-4 0.0 0.0 15.684473578695114 0.0 27 4.662308961890287E-4 0.0 0.0 15.884020402264017 0.0 28 4.662308961890287E-4 0.0 0.0 16.05139729399588 0.0 29 4.662308961890287E-4 0.0 0.0 16.255606426526672 0.0 30 4.662308961890287E-4 0.0 0.0 16.4584168663689 0.0 31 4.662308961890287E-4 0.0 0.0 16.62625998899695 0.0 32 4.662308961890287E-4 0.0 0.0 16.841192432140094 0.0 33 4.662308961890287E-4 0.0 0.0 16.99598108967485 0.0 34 4.662308961890287E-4 0.0 0.0 17.195527913243755 0.0 35 4.662308961890287E-4 0.0 0.0 17.455218522421045 0.0 36 4.662308961890287E-4 0.0 0.0 17.627723954010985 0.0 37 4.662308961890287E-4 0.0 0.0 17.799296923808548 0.0 38 4.662308961890287E-4 0.0 0.0 18.044534375203977 0.0 39 4.662308961890287E-4 0.0 0.0 18.67487854685154 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 20 7.020444E-4 45.0 22 ATCTACC 35 1.2057535E-7 45.0 15 AACCCGA 20 7.020444E-4 45.0 24 CGCATGG 25 3.880164E-5 45.0 2 CCGTGGC 25 3.880164E-5 45.0 26 CAACCCG 20 7.020444E-4 45.0 23 GGATCGT 20 7.020444E-4 45.0 8 ATCAACC 25 3.880164E-5 45.0 10 GCATTCC 20 7.020444E-4 45.0 12 TACGAAT 70 0.0 45.0 12 CGAATAT 70 0.0 45.0 14 GCTACGA 70 0.0 45.0 10 CCAGTAG 55 1.8189894E-12 45.0 26 AAGCTAC 70 0.0 45.0 8 CGTTTTT 2980 0.0 43.489933 1 TGGGATC 150 0.0 42.000004 6 CCTATGC 75 0.0 42.000004 35 AGCTACG 75 0.0 42.000004 9 ATACTAT 65 0.0 41.538464 45 TAGCATA 60 3.6379788E-12 41.249996 30 >>END_MODULE