##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933588.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 87122 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.80363168889603 33.0 31.0 34.0 30.0 34.0 2 31.906590757787928 33.0 31.0 34.0 30.0 34.0 3 32.02638828309727 33.0 31.0 34.0 30.0 34.0 4 35.810541539450426 37.0 35.0 37.0 35.0 37.0 5 35.80659305341934 37.0 35.0 37.0 35.0 37.0 6 35.563336470696264 37.0 35.0 37.0 33.0 37.0 7 35.79125823557769 37.0 35.0 37.0 35.0 37.0 8 35.32302977433943 37.0 35.0 37.0 32.0 37.0 9 37.28651775670898 39.0 37.0 39.0 34.0 39.0 10 36.97162599573013 39.0 37.0 39.0 33.0 39.0 11 36.99361814467069 39.0 37.0 39.0 33.0 39.0 12 37.02985468653153 39.0 37.0 39.0 33.0 39.0 13 36.86949335414706 39.0 37.0 39.0 33.0 39.0 14 37.89375817818691 40.0 37.0 41.0 33.0 41.0 15 37.92414085994353 40.0 37.0 41.0 33.0 41.0 16 38.05164022864489 40.0 37.0 41.0 33.0 41.0 17 37.94954202153302 40.0 37.0 41.0 33.0 41.0 18 37.70295677326048 39.0 37.0 40.0 33.0 41.0 19 37.38931613140194 38.0 37.0 40.0 33.0 41.0 20 36.75296710360185 38.0 35.0 40.0 32.0 41.0 21 36.72131034641078 38.0 35.0 40.0 32.0 41.0 22 36.81568375381649 38.0 35.0 40.0 32.0 41.0 23 36.61442574780193 38.0 35.0 40.0 32.0 41.0 24 36.59926310231629 38.0 35.0 40.0 32.0 41.0 25 36.4761024769863 38.0 35.0 40.0 32.0 41.0 26 36.43010950161842 38.0 35.0 40.0 32.0 41.0 27 36.32104405316682 38.0 35.0 40.0 31.0 41.0 28 36.249879479350795 38.0 35.0 40.0 31.0 41.0 29 36.149468561327794 38.0 35.0 40.0 31.0 41.0 30 36.074229241752946 38.0 35.0 40.0 31.0 41.0 31 35.80398751176511 38.0 35.0 40.0 30.0 41.0 32 35.19609283533436 38.0 35.0 40.0 26.0 41.0 33 34.829870755951426 38.0 35.0 40.0 23.0 41.0 34 34.40081724478318 38.0 34.0 40.0 20.0 41.0 35 34.10000918252565 38.0 34.0 40.0 18.0 41.0 36 33.853435412410185 38.0 33.0 40.0 16.0 41.0 37 33.76567342347513 38.0 34.0 40.0 15.0 41.0 38 33.882739147402496 38.0 33.0 40.0 16.0 41.0 39 33.78866417208053 38.0 33.0 40.0 15.0 41.0 40 33.7140102385161 38.0 33.0 40.0 15.0 41.0 41 33.412593833934025 38.0 33.0 40.0 15.0 41.0 42 33.307224352058036 37.0 33.0 40.0 13.0 41.0 43 33.10614999655655 37.0 33.0 40.0 12.0 41.0 44 33.036225063703775 37.0 33.0 40.0 11.0 41.0 45 33.174307293221 37.0 33.0 40.0 12.0 41.0 46 32.9058331994215 37.0 32.0 40.0 10.0 41.0 47 32.691926264319 37.0 31.0 40.0 10.0 41.0 48 32.665147723881454 37.0 31.0 40.0 10.0 41.0 49 32.791545189504376 37.0 32.0 40.0 10.0 41.0 50 32.64985881866807 37.0 31.0 40.0 10.0 41.0 51 31.597931636096508 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 2.0 16 9.0 17 22.0 18 34.0 19 79.0 20 137.0 21 233.0 22 451.0 23 680.0 24 996.0 25 1559.0 26 2259.0 27 2455.0 28 2414.0 29 2152.0 30 2327.0 31 2673.0 32 2893.0 33 3743.0 34 5459.0 35 7236.0 36 8895.0 37 10880.0 38 16971.0 39 12561.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.630357429811067 3.9519294782029797 34.502192327999815 29.915520763986137 2 35.032483184499895 17.03702853469847 33.24533412915222 14.68515415164941 3 15.035237942196 17.559284681251576 51.5070820229104 15.89839535364202 4 12.627120589518148 4.4156470237138725 64.42804343334633 18.529188953421638 5 21.595004706044396 5.261587199559239 53.83944353894539 19.30396455545098 6 15.046716099263103 16.808613209063154 57.10957048736255 11.035100204311195 7 54.19756203943895 2.2921879663001308 38.63892013498313 4.871329859277795 8 51.23964096324695 12.180620279607906 29.145336424783636 7.434402332361516 9 47.239503225362135 4.001285553591515 30.691444181722183 18.067767039324167 10 31.754321526135765 15.959229586097656 36.54989554877069 15.73655333899589 11 23.128486490209134 14.504947085695921 41.11475861435688 21.251807809738068 12 17.16673170955671 11.871857854502881 46.79644636257203 24.16496407336838 13 20.3714331626914 14.032047014531345 52.176258579922404 13.420261242854847 14 17.05309795459241 20.221069305112373 44.31372098895801 18.412111751337203 15 10.666651362457245 14.95718647413971 53.527237666720225 20.848924496682812 16 10.437088221115218 16.189940543146392 44.15991368425885 29.213057551479533 17 10.945570579187805 17.932324785932373 47.00305318977985 24.119051445099977 18 11.296802185441106 15.793944124331396 48.60769954776061 24.301554142466884 19 11.951057138265881 19.012419365946602 47.24868575101582 21.7878377447717 20 13.972360597782421 20.30256422028879 49.30786712885379 16.417208053074997 21 12.720093661761666 26.547829480498613 44.187461261219894 16.544615596519822 22 10.308532861963684 18.855168614127315 46.356832946902045 24.479465577006955 23 12.055508367576502 24.198250728862973 41.705883703312594 22.04035720024793 24 13.912674181033493 20.333555244369965 39.948577856339384 25.805192718257157 25 10.63336470696265 28.783774477169942 37.679346204173456 22.903514611693947 26 11.053465255618558 22.3881453593811 43.0878538141916 23.47053557080875 27 16.405729896007898 22.871375771906063 39.884300176763624 20.838594155322422 28 10.152429925851106 21.26213815109846 44.647735359610664 23.937696563439776 29 15.202819035375681 19.06636670416198 41.04244622483414 24.6883680356282 30 18.8873074539152 23.265076559307637 38.570051192580515 19.277564794196643 31 18.20320929271596 21.89114115837561 33.64018273226051 26.26546681664792 32 19.461215307270265 25.15667684396593 33.754964302931526 21.62714354583228 33 18.748421753403274 16.72826610959344 33.3107596244347 31.212552512568582 34 19.022749707306993 20.13039186428227 35.45717499598264 25.38968343242809 35 21.80161153325222 20.682491219209844 32.39939395330686 25.11650329423108 36 20.464406234934916 24.25564151419848 32.58878354491403 22.69116870595257 37 22.468492458850804 18.141227244553615 38.6136681894355 20.776612107160076 38 17.865751474943185 17.22756594201235 33.32568122862193 31.581001354422533 39 17.91166410321159 16.980785565069674 42.160418723169805 22.947131608548933 40 21.060122586717476 16.405729896007898 36.88046647230321 25.65368104497142 41 20.878767705057278 19.090470834002893 38.115516172723304 21.91524528821652 42 24.287780353986363 16.643327747296894 39.789031473106675 19.279860425610064 43 19.6242051376231 16.281765799683203 40.69695369711439 23.397075365579305 44 19.455476228736714 15.5678244301095 38.980969215582746 25.995730125571036 45 20.539014255871077 13.35139230045224 35.84743233626409 30.262161107412595 46 25.91653084180804 17.220679047772087 37.7298500952687 19.132940015151167 47 15.875439039507816 17.708500723123898 46.71954271022244 19.69651752714584 48 18.525745506301508 18.90452468951585 40.346869906567804 22.22285989761484 49 20.659534905075642 12.518078097380684 45.48449300980234 21.337893987741328 50 21.50203163380088 11.782328229379491 39.472234338054676 27.243405798764954 51 19.015862813066732 12.468722021992148 35.21613369757352 33.2992814673676 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 179.0 1 334.0 2 489.0 3 3709.5 4 6930.0 5 4208.5 6 1487.0 7 1380.5 8 1274.0 9 1234.0 10 1194.0 11 1158.0 12 1122.0 13 1043.0 14 964.0 15 869.5 16 775.0 17 717.5 18 660.0 19 593.5 20 527.0 21 528.0 22 529.0 23 452.5 24 376.0 25 371.5 26 365.0 27 363.0 28 397.5 29 432.0 30 453.5 31 475.0 32 530.0 33 585.0 34 665.5 35 746.0 36 890.5 37 1035.0 38 1120.0 39 1205.0 40 1492.5 41 1780.0 42 2412.5 43 3045.0 44 3703.5 45 4362.0 46 9717.0 47 15072.0 48 13339.0 49 11606.0 50 10909.0 51 10212.0 52 8247.0 53 6282.0 54 4936.0 55 3590.0 56 2922.5 57 2255.0 58 2014.5 59 1774.0 60 1610.0 61 1446.0 62 1295.0 63 1144.0 64 1019.5 65 895.0 66 755.5 67 616.0 68 542.0 69 468.0 70 399.0 71 330.0 72 276.5 73 223.0 74 180.5 75 108.0 76 78.0 77 61.5 78 45.0 79 35.0 80 25.0 81 19.0 82 13.0 83 8.5 84 4.0 85 3.5 86 3.0 87 2.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 87122.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.87527834530887 #Duplication Level Percentage of deduplicated Percentage of total 1 78.68927191421005 41.607171552535526 2 11.296834975904138 11.94646587543904 3 4.749706942213346 7.534262298845297 4 2.114357660747623 4.471889993342669 5 0.9942256762037077 2.628497968366199 6 0.5882863717275213 1.8663483391106725 7 0.3364737550471063 1.2453800417804917 8 0.1932010593496288 0.817244783177613 9 0.16932227673338254 0.8057666261105116 >10 0.7814874310771501 7.417185096760864 >50 0.04558676681283376 1.7882968710543834 >100 0.026049581035905007 4.090815178714906 >500 0.006512395258976252 1.8479832878033102 >1k 0.008683193678635003 11.932692086958518 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4371 5.01710245402998 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGC 2353 2.7008103578889373 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCG 2191 2.5148642134018964 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTC 1481 1.6999150616377035 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCC 569 0.6531071371180643 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCTCTGTT 524 0.6014554303161085 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTA 517 0.5934207203691375 No Hit CCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 473 0.5429168292738918 No Hit GCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 460 0.5279952250866601 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCT 458 0.5256995936732398 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTC 426 0.48896949105851567 No Hit CTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGCT 332 0.3810748146277634 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 313 0.3592663162002709 No Hit GAACTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCT 275 0.3156493193452859 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGC 236 0.27088450678359083 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGT 188 0.21578935286150455 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATG 153 0.17561580312664998 No Hit TCCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTG 135 0.15495512040586765 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTAT 115 0.13199880627166502 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTT 100 0.11478157067101306 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGC 98 0.11248593925759282 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 95 0.10904249213746242 No Hit CGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTG 90 0.10330341360391176 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.41206583870893687 0.0 2 0.0 0.0 0.0 1.9799820940749753 0.0 3 0.0 0.0 0.0 2.7191754091962994 0.0 4 0.0 0.0 0.0 4.009320263538486 0.0 5 0.0 0.0 0.0 7.841876908243613 0.0 6 0.0 0.0 0.0 9.424714767796882 0.0 7 0.0 0.0 0.0 11.299097816854525 0.0 8 0.0 0.0 0.0 13.815109845963132 0.0 9 0.0 0.0 0.0 14.797640090907004 0.0 10 0.0 0.0 0.0 19.65519616170428 0.0 11 0.0 0.0 0.0 24.953513463878238 0.0 12 0.0 0.0 0.0 32.297238355409654 0.0 13 0.0 0.0 0.0 33.971901471499734 0.0 14 0.0 0.0 0.0 34.75241615206262 0.0 15 0.0 0.0 0.0 36.29163701476091 0.0 16 0.0 0.0 0.0 38.40361791510755 0.0 17 0.0 0.0 0.0 40.9919423337389 0.0 18 0.0 0.0 0.0 43.201487569155894 0.0 19 0.0 0.0 0.0 45.287068708248206 0.0 20 0.0 0.0 0.0 46.55425724845619 0.0 21 0.0 0.0 0.0 47.867358416932575 0.0 22 0.0 0.0 0.0 48.927940129932736 0.0 23 0.0 0.0 0.0 49.71189825761576 0.0 24 0.0 0.0 0.0 50.18479832878033 0.0 25 0.0 0.0 0.0 50.44305686279011 0.0 26 0.0 0.0 0.0 50.69442850255963 0.0 27 0.0 0.0 0.0 50.86200959573931 0.0 28 0.0 0.0 0.0 51.00663437478478 0.0 29 0.0 0.0 0.0 51.204058676338924 0.0 30 0.0 0.0 0.0 51.388857005119256 0.0 31 0.0 0.0 0.0 51.562177176832485 0.0 32 0.0 0.0 0.0 51.698767245930995 0.0 33 0.0 0.0 0.0 51.83306168361608 0.0 34 0.0 0.0 0.0 51.97079956842129 0.0 35 0.0 0.0 0.0 52.10279837469296 0.0 36 0.0 0.0 0.0 52.229058102431075 0.0 37 0.0 0.0 0.0 52.34383967310209 0.0 38 0.0 0.0 0.0 52.48042974220059 0.0 39 0.0 0.0 0.0 52.64456738826014 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGACTG 60 0.0 45.000004 3 GGGGCGA 30 2.1423948E-6 45.000004 6 AATGACT 60 0.0 45.000004 2 ACTAATC 20 6.997397E-4 45.0 10 ATGGGAA 20 6.997397E-4 45.0 5 GCCTCGA 20 6.997397E-4 45.0 14 TCGATCA 20 6.997397E-4 45.0 17 CTGGGTA 20 6.997397E-4 45.0 5 GCGACCT 40 6.690243E-9 45.0 11 CAACCAA 20 6.997397E-4 45.0 38 CCTCGAT 20 6.997397E-4 45.0 15 ATGAATG 85 0.0 45.0 21 GGATTAA 20 6.997397E-4 45.0 8 TTGGGTC 40 6.690243E-9 45.0 5 ATCAGAA 20 6.997397E-4 45.0 20 TGGGGCG 35 1.1947304E-7 45.0 5 GGCCTCG 20 6.997397E-4 45.0 13 GGCCTAT 20 6.997397E-4 45.0 8 TGCTTTG 40 6.690243E-9 45.0 1 CTAATCC 20 6.997397E-4 45.0 11 >>END_MODULE