##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933586.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 449942 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30771299411924 33.0 31.0 34.0 30.0 34.0 2 32.502791470900696 34.0 31.0 34.0 31.0 34.0 3 32.56363709100284 34.0 31.0 34.0 31.0 34.0 4 36.09385876401847 37.0 35.0 37.0 35.0 37.0 5 36.09764814131599 37.0 35.0 37.0 35.0 37.0 6 36.07059798818514 37.0 35.0 37.0 35.0 37.0 7 36.129758946708684 37.0 35.0 37.0 35.0 37.0 8 36.00301816678594 37.0 35.0 37.0 35.0 37.0 9 37.8379746722911 39.0 38.0 39.0 35.0 39.0 10 37.28976845904583 39.0 37.0 39.0 34.0 39.0 11 37.25054340337199 39.0 37.0 39.0 34.0 39.0 12 37.263022789603994 39.0 37.0 39.0 34.0 39.0 13 37.25175689311067 39.0 37.0 39.0 34.0 39.0 14 38.5310262211574 40.0 38.0 41.0 34.0 41.0 15 38.57243822537127 40.0 38.0 41.0 34.0 41.0 16 38.59205186446253 40.0 38.0 41.0 34.0 41.0 17 38.53591796275965 40.0 38.0 41.0 34.0 41.0 18 38.09260749163226 39.0 38.0 40.0 34.0 41.0 19 37.63549301910024 38.0 37.0 40.0 34.0 41.0 20 37.10622924732521 38.0 35.0 40.0 34.0 41.0 21 36.997895284281086 38.0 35.0 40.0 33.0 41.0 22 36.97645474305577 38.0 35.0 40.0 33.0 41.0 23 36.895066475234586 38.0 35.0 40.0 33.0 41.0 24 36.784305532713105 38.0 35.0 40.0 33.0 41.0 25 36.69026674549164 38.0 35.0 40.0 33.0 41.0 26 36.60926963919794 38.0 35.0 40.0 33.0 41.0 27 36.52442314787239 38.0 35.0 40.0 33.0 41.0 28 36.35321663681097 38.0 35.0 40.0 32.0 41.0 29 36.20996928493006 38.0 35.0 40.0 31.0 41.0 30 36.01090585008735 38.0 35.0 40.0 31.0 41.0 31 35.62401153926506 38.0 35.0 40.0 30.0 41.0 32 35.00616523907526 37.0 35.0 40.0 24.0 41.0 33 34.21553000164466 37.0 34.0 40.0 18.0 41.0 34 33.52330078098955 38.0 33.0 40.0 15.0 41.0 35 33.01278831493837 37.0 33.0 40.0 10.0 41.0 36 32.737530615057054 37.0 33.0 40.0 10.0 41.0 37 32.52753688253153 37.0 32.0 40.0 10.0 41.0 38 32.38074907432514 37.0 31.0 40.0 10.0 41.0 39 32.303430219895006 37.0 31.0 40.0 9.0 41.0 40 32.13635090745029 37.0 31.0 40.0 8.0 41.0 41 31.96368643069551 36.0 30.0 40.0 8.0 41.0 42 31.798456245471638 36.0 30.0 40.0 8.0 41.0 43 31.640771477212617 36.0 30.0 40.0 8.0 41.0 44 31.489927590667243 36.0 29.0 40.0 8.0 41.0 45 31.450889225722428 35.0 29.0 40.0 8.0 41.0 46 31.26570535757942 35.0 28.0 40.0 7.0 41.0 47 31.157240266523242 35.0 27.0 40.0 7.0 41.0 48 31.058276400069342 35.0 27.0 40.0 7.0 41.0 49 31.014904143200678 35.0 27.0 40.0 7.0 41.0 50 30.909890608122826 35.0 27.0 40.0 7.0 41.0 51 29.989143045103592 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 1.0 11 3.0 12 4.0 13 10.0 14 14.0 15 26.0 16 49.0 17 95.0 18 192.0 19 383.0 20 700.0 21 1080.0 22 1712.0 23 2892.0 24 5498.0 25 10737.0 26 17533.0 27 19467.0 28 17094.0 29 14260.0 30 12401.0 31 12454.0 32 13603.0 33 16567.0 34 24799.0 35 32391.0 36 39901.0 37 49473.0 38 79256.0 39 77315.0 40 27.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.367865191513573 4.21854372341324 37.66463233038925 36.74895875468393 2 42.91153081952785 4.005405141107076 39.49597948179988 13.587084557565197 3 17.463806446164174 4.086971209622574 62.74119775437723 15.708024589836022 4 13.993581394935347 4.2774402034039944 62.945890803703584 18.78308759795707 5 13.054349227233732 5.270901582870681 62.66763271710576 19.007116472789825 6 16.540354090082722 6.012330478150517 64.66033399860427 12.786981433162497 7 62.44538184921612 2.2594023229660714 31.60540691911402 3.6898089087037884 8 63.46729133977268 2.608113934684915 30.141884954060743 3.7827097714816578 9 58.788910570695776 4.123642602824364 32.21126278498117 4.876184041498682 10 28.833938596530217 18.2783558769797 38.25626414071147 14.631441385778613 11 20.51842237443937 19.598303781376266 43.205346466877955 16.67792737730641 12 17.789403967622494 17.31289810686711 47.561463477514884 17.33623444799552 13 17.609158513763994 17.197549906432386 49.60217094647755 15.591120633326073 14 16.34499557720773 18.004987309475442 49.2041196420872 16.445897471229625 15 15.162843210902738 18.44215476661436 49.826199821310304 16.568802201172595 16 15.606900444946238 17.28067173102311 48.78362100004001 18.328806823990647 17 15.620457747887507 18.021433873699277 47.190749029874965 19.167359348538255 18 16.44789772904063 17.63871787919332 47.920620880024536 17.992763511741515 19 17.239777571331416 20.511310346666903 45.95347844833334 16.295433633668342 20 18.829982531081786 20.15059718808202 44.80733072262647 16.212089558209726 21 17.88497184081504 21.435651706219915 44.57796782696437 16.101408626000683 22 16.994857114917032 19.961461699507936 43.96900044894675 19.074680736628277 23 16.145192046974945 20.798902969716096 43.6376244049233 19.41828057838566 24 16.0367336234448 20.522422890061385 44.79710718270355 18.643736303790266 25 16.618586395579875 21.321859261860418 43.34825377493099 18.711300567628715 26 16.23920416409226 21.72635584141956 43.77853145516533 18.255908539322846 27 16.211867307341834 20.9833711900645 44.06190131172462 18.742860190869045 28 15.85270990483218 20.721337416822614 44.200585853287755 19.225366825057453 29 16.804832622871395 20.080588164696785 43.07888572304875 20.03569348938308 30 17.964982153255306 20.159042721061827 42.80929542029862 19.06667970538425 31 17.043974556720645 22.494454840846153 40.40876379622262 20.052806806210576 32 16.871730134106176 22.3968867098426 39.30817749843313 21.423205657618094 33 17.343346475767987 22.689813353721146 38.01378844384387 21.953051726666992 34 16.46301078805713 22.879837845766787 37.1358975156798 23.521253850496286 35 16.68859541896511 23.90085833285179 36.28023167430469 23.13031457387841 36 16.820167932755776 25.57774113107912 34.735365891603806 22.8667250445613 37 16.98530032759778 26.538531632966027 34.964951038133805 21.51121700130239 38 17.18799311911313 26.90969058234172 33.90281414048922 21.99950215805593 39 17.32245489418636 25.71020264834134 33.55165776922359 23.41568468824871 40 18.260353556680638 25.220139484644687 35.34455552048931 21.174951438185367 41 16.610807615203736 26.678994181472277 34.55423143427375 22.155966769050234 42 17.322232643318472 26.83790355201337 33.830138106689304 22.00972569797885 43 17.504033853252196 25.262589400411606 35.033182054575924 22.200194691760274 44 18.249907765889827 25.16857728329429 33.602330967102425 22.979183983713455 45 18.93110667597157 24.384476221379643 33.73212547394998 22.95229162869881 46 18.581728311649055 25.31704086304457 34.370429966529024 21.730800858777354 47 17.338234705806528 26.27294184583791 35.17253334874273 21.216290099612838 48 17.29289552875704 25.318152117384017 35.42100981904334 21.9679425348156 49 18.62484498001965 24.11710842730841 35.134972952069376 22.123073640602566 50 17.695614101373067 23.563481515395317 35.20209271417205 23.538811669059566 51 17.180436589604884 23.69749878873277 33.986380466815724 25.135684154846626 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 348.0 1 897.0 2 1446.0 3 17473.5 4 33501.0 5 21960.5 6 10420.0 7 10111.5 8 9803.0 9 9653.0 10 9503.0 11 9179.0 12 8855.0 13 8633.0 14 8411.0 15 8061.0 16 7711.0 17 7208.5 18 6706.0 19 6381.0 20 6056.0 21 5699.0 22 5342.0 23 5334.0 24 5326.0 25 5183.0 26 5179.5 27 5319.0 28 5481.5 29 5644.0 30 5876.0 31 6108.0 32 6772.5 33 7437.0 34 8193.5 35 8950.0 36 9575.0 37 10200.0 38 10839.0 39 11478.0 40 12494.5 41 13511.0 42 15289.5 43 17068.0 44 19644.5 45 22221.0 46 25771.5 47 29322.0 48 33045.5 49 36769.0 50 35541.5 51 34314.0 52 30149.5 53 25985.0 54 22318.0 55 18651.0 56 17044.0 57 15437.0 58 14376.5 59 13316.0 60 12590.0 61 11864.0 62 10874.0 63 9884.0 64 8831.5 65 7779.0 66 6897.5 67 6016.0 68 5281.0 69 4546.0 70 3913.0 71 3280.0 72 2881.5 73 2483.0 74 2095.5 75 1335.0 76 962.0 77 749.5 78 537.0 79 448.0 80 359.0 81 279.0 82 199.0 83 141.0 84 83.0 85 50.0 86 17.0 87 14.0 88 11.0 89 9.5 90 8.0 91 6.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 449942.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.48625437790052 #Duplication Level Percentage of deduplicated Percentage of total 1 78.23069617071187 38.71344130864095 2 8.6238342840219 8.535225141839348 3 3.636609554807282 5.398865565068902 4 2.1864265375217307 4.327922392575704 5 1.5768691795783816 3.901667467064354 6 1.1989208775460305 3.5598062115131155 7 0.8950783750192608 3.1005853308052687 8 0.6807257751321021 2.6949255095824567 9 0.5535874470632038 2.4655472303204022 >10 2.329680841414682 17.653289920376345 >50 0.06152421094460549 2.0607738197353958 >100 0.024699500743836807 2.449905164295776 >500 8.981636634122477E-4 0.3255724841884354 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.4908183170612383E-4 4.8124724539935615 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21655 4.8128425441501355 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCC 928 0.20624880540158508 No Hit CTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGCT 537 0.11934871605673619 TruSeq Adapter, Index 20 (95% over 23bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGC 490 0.10890292526592317 No Hit CCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 484 0.10756942005858533 TruSeq Adapter, Index 23 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1329060189980042 0.0 2 0.0 0.0 0.0 0.4289441750270035 0.0 3 0.0 0.0 0.0 0.7092025194358385 0.0 4 0.0 0.0 0.0 1.0774722075289704 0.0 5 0.0 0.0 0.0 1.9586968987113895 0.0 6 0.0 0.0 0.0 3.2455294237923997 0.0 7 0.0 0.0 0.0 4.345671219846113 0.0 8 0.0 0.0 0.0 5.846753581572736 0.0 9 0.0 0.0 0.0 6.797320543536722 0.0 10 0.0 0.0 0.0 8.235505909650577 0.0 11 0.0 0.0 0.0 10.476461410581809 0.0 12 0.0 0.0 0.0 12.251579092416355 0.0 13 0.0 0.0 0.0 13.040569673424574 0.0 14 0.0 0.0 0.0 13.392615048161764 0.0 15 0.0 0.0 0.0 13.796222624249348 0.0 16 0.0 0.0 0.0 14.520093700965901 0.0 17 0.0 0.0 0.0 15.444212809651022 0.0 18 0.0 0.0 0.0 16.352329855848087 0.0 19 0.0 0.0 0.0 16.859728587240134 0.0 20 0.0 0.0 0.0 17.309119842112985 0.0 21 0.0 0.0 0.0 17.831853883389414 0.0 22 0.0 0.0 0.0 18.305692733730126 0.0 23 0.0 0.0 0.0 18.719079348004854 0.0 24 0.0 0.0 0.0 19.044010116859507 0.0 25 0.0 0.0 0.0 19.302265625347268 0.0 26 0.0 0.0 0.0 19.52851700885892 0.0 27 0.0 0.0 0.0 19.75676865018158 0.0 28 0.0 0.0 0.0 19.979464019806997 0.0 29 2.222508678896391E-4 0.0 0.0 20.200381382489297 0.0 30 2.222508678896391E-4 0.0 0.0 20.449524605393584 0.0 31 2.222508678896391E-4 0.0 0.0 20.67355348022634 0.0 32 2.222508678896391E-4 0.0 0.0 20.918029434904945 0.0 33 2.222508678896391E-4 0.0 0.0 21.146058825359713 0.0 34 2.222508678896391E-4 0.0 0.0 21.36475367936312 0.0 35 2.222508678896391E-4 0.0 0.0 21.60256210800503 0.0 36 2.222508678896391E-4 0.0 0.0 21.82592423023412 0.0 37 4.445017357792782E-4 0.0 0.0 22.06684417102649 0.0 38 4.445017357792782E-4 0.0 0.0 22.303096843593174 0.0 39 4.445017357792782E-4 0.0 0.0 22.545350289592882 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACATACG 45 3.8380676E-10 45.000004 17 TACGCGG 20 7.0287054E-4 45.0 2 CTACGGG 30 2.1625456E-6 44.999996 3 CGTTTTT 11110 0.0 43.784874 1 TTGCTTG 305 0.0 40.57377 1 GTCGTTT 50 1.0786607E-9 40.5 9 CCCATTA 45 1.9237632E-8 40.000004 33 TCGTTTG 85 0.0 39.705883 1 GGCGATA 40 3.451969E-7 39.375 8 GTTTTTT 12625 0.0 39.297028 2 TATGCGG 35 6.239814E-6 38.57143 2 AGACACG 105 0.0 38.57143 24 TCAAGCG 105 0.0 38.57143 17 TTTGGGC 1085 0.0 38.15668 4 TGGGCGA 645 0.0 38.023254 6 ACACGTG 90 0.0 37.500004 42 ACGTGAG 90 0.0 37.500004 44 CACGTGA 90 0.0 37.500004 43 TGGGTAT 330 0.0 37.5 6 TGCGGGA 365 0.0 36.986298 4 >>END_MODULE