SRR2933583.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933583.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	84541
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3483	4.119894489064477	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCC	435	0.5145432393749778	No Hit
CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT	345	0.40808601743532724	No Hit
CCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	331	0.3915260051336038	No Hit
GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	310	0.36668598668101865	No Hit
TCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	274	0.32410309790515845	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	216	0.2554973326551614	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGC	194	0.2294744561810246	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	172	0.20345157970688776	No Hit
TCCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG	111	0.13129724039223573	No Hit
GGGACTGTCTAGGGCCTGTCTCTTATACACATCTGACGCAGCTACCATCGT	108	0.1277486663275807	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	89	0.1052743639180989	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGCAAC	20	6.996206E-4	45.0	7
GCGATCT	20	6.996206E-4	45.0	9
CAACCCG	20	6.996206E-4	45.0	23
AGGGTGG	20	6.996206E-4	45.0	6
AACCCGA	20	6.996206E-4	45.0	24
CATTCCC	20	6.996206E-4	45.0	13
ACCCGAG	20	6.996206E-4	45.0	41
CTAGGGT	20	6.996206E-4	45.0	4
ACCTGGG	20	6.996206E-4	45.0	3
CGGGATC	20	6.996206E-4	45.0	6
CGCGGGA	20	6.996206E-4	45.0	4
TGGGCAA	20	6.996206E-4	45.0	6
TGGGTAC	20	6.996206E-4	45.0	6
AGACCCG	20	6.996206E-4	45.0	39
TGGGACA	20	6.996206E-4	45.0	6
CCAAGCA	20	6.996206E-4	45.0	18
CGACTCC	20	6.996206E-4	45.0	28
TGCGGGT	20	6.996206E-4	45.0	4
TTGCCTG	20	6.996206E-4	45.0	1
GGCGATC	25	3.860103E-5	44.999996	8