##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933583.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 84541 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.910422162027892 33.0 31.0 34.0 30.0 34.0 2 32.10411516305698 34.0 31.0 34.0 30.0 34.0 3 32.234028459564 34.0 31.0 34.0 30.0 34.0 4 35.79630002010859 37.0 35.0 37.0 35.0 37.0 5 35.85410629162182 37.0 35.0 37.0 35.0 37.0 6 35.83464827716729 37.0 35.0 37.0 35.0 37.0 7 35.790196472717376 37.0 35.0 37.0 35.0 37.0 8 35.64113270484144 37.0 35.0 37.0 33.0 37.0 9 37.48294910161933 39.0 37.0 39.0 34.0 39.0 10 37.06983593759241 39.0 37.0 39.0 33.0 39.0 11 37.05748689984741 39.0 37.0 39.0 33.0 39.0 12 37.02040430087177 39.0 37.0 39.0 33.0 39.0 13 37.001324800984136 39.0 37.0 39.0 33.0 39.0 14 38.102482818987234 40.0 37.0 41.0 33.0 41.0 15 38.12863580984374 40.0 37.0 41.0 33.0 41.0 16 38.257661962834604 40.0 38.0 41.0 33.0 41.0 17 38.2652085970121 40.0 38.0 41.0 33.0 41.0 18 38.06458404797672 39.0 37.0 41.0 34.0 41.0 19 37.79766030683337 39.0 37.0 41.0 34.0 41.0 20 37.36320838409765 39.0 35.0 40.0 33.0 41.0 21 37.2783974639524 39.0 35.0 40.0 33.0 41.0 22 37.25882116369572 39.0 35.0 40.0 33.0 41.0 23 37.13799221679422 39.0 35.0 40.0 33.0 41.0 24 37.03778048520836 39.0 35.0 40.0 33.0 41.0 25 36.93572349510888 38.0 35.0 40.0 33.0 41.0 26 36.900154954400826 38.0 35.0 40.0 33.0 41.0 27 36.85248577613229 38.0 35.0 40.0 33.0 41.0 28 36.777445263245056 38.0 35.0 40.0 33.0 41.0 29 36.60030044593747 38.0 35.0 40.0 32.0 41.0 30 36.383364284784896 38.0 35.0 40.0 31.0 41.0 31 36.088099265445166 38.0 35.0 40.0 30.0 41.0 32 35.78500372600277 38.0 35.0 40.0 30.0 41.0 33 35.325037555742185 38.0 35.0 40.0 25.0 41.0 34 34.99095113613513 38.0 35.0 40.0 23.0 41.0 35 34.71907121988148 38.0 35.0 40.0 21.0 41.0 36 34.53642611277368 38.0 34.0 40.0 20.0 41.0 37 34.432961521628556 38.0 34.0 40.0 18.0 41.0 38 34.315255319903955 38.0 34.0 40.0 18.0 41.0 39 34.27253048816551 38.0 34.0 40.0 18.0 41.0 40 34.082303261139565 38.0 34.0 40.0 18.0 41.0 41 33.946534817425864 38.0 33.0 40.0 17.0 41.0 42 33.719733620373546 38.0 33.0 40.0 15.0 41.0 43 33.59724867224187 37.0 33.0 40.0 15.0 41.0 44 33.46854189091683 37.0 33.0 40.0 15.0 41.0 45 33.48123395748808 37.0 33.0 40.0 15.0 41.0 46 33.23547154635029 37.0 33.0 40.0 15.0 41.0 47 33.13173489786021 37.0 33.0 40.0 15.0 41.0 48 33.05494375510108 37.0 33.0 40.0 14.0 41.0 49 33.075738399119956 37.0 33.0 40.0 13.0 41.0 50 32.89600312274518 36.0 32.0 40.0 12.0 41.0 51 31.953076022285046 35.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 0.0 11 2.0 12 6.0 13 5.0 14 6.0 15 10.0 16 17.0 17 24.0 18 42.0 19 81.0 20 119.0 21 208.0 22 281.0 23 453.0 24 730.0 25 1382.0 26 1929.0 27 2268.0 28 2152.0 29 2035.0 30 2062.0 31 2253.0 32 2577.0 33 3302.0 34 5019.0 35 6638.0 36 8468.0 37 10286.0 38 16734.0 39 15445.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.077560000473145 5.895364379413539 39.979418270425 31.04765734968832 2 34.476762754166614 5.892998663370435 40.73408168817497 18.89615689428798 3 19.722974651352597 5.877621509090264 54.46824617641145 19.931157663145694 4 15.295537076684685 5.833855762292852 56.169196011402754 22.70141114961971 5 13.591038667628725 7.188228196969518 57.00074520055358 22.219987934848177 6 17.915567594421642 8.148708910469477 60.12703895151464 13.808684543594232 7 64.29069918737655 3.802888539288629 26.558711157899715 5.347701115435114 8 62.78492092594126 3.9862315326291387 26.584734034373852 6.6441135070557475 9 57.771968630605265 6.059781644409221 28.71269561514531 7.455554109840196 10 29.579730544942688 20.251712186986197 34.66365432157178 15.504902946499332 11 20.321500810257746 18.80625968465005 39.13722335908021 21.735016146011993 12 17.8138418045682 16.263114938313954 45.52347381743769 20.399569439680153 13 20.41021516187412 17.230692799943224 46.40115446942904 15.957937568753621 14 18.32483646987852 19.486403047042263 44.993553423782544 17.19520705929667 15 13.742444494387337 17.877716137731987 47.32141801019624 21.058421357684438 16 14.207307696857146 17.807927514460438 44.70966749861014 23.27509729007227 17 14.143433363693356 18.294082161318176 42.86204326894642 24.70044120604204 18 15.436297181249333 17.507481576986315 45.52229095941614 21.53393028234821 19 16.04783477839155 19.615334571391397 45.19937071953253 19.13745993068452 20 16.265480654357056 22.811416945624018 42.98860907725246 17.934493322766468 21 15.776960291456216 23.795554819555008 42.79816893578264 17.629315953206138 22 14.26645059793473 22.061484959960257 41.25099064359305 22.421073798511966 23 14.411942134585587 22.49322813782662 39.10646905051986 23.98836067706793 24 15.028211163814007 22.27676511988266 39.712092357554326 22.98293135874901 25 14.445062159189032 24.42601814504205 37.34282774038632 23.786091955382595 26 13.910410333447675 25.068310050744607 38.717308761429365 22.30397085437835 27 15.877503223288109 23.671354727292083 39.979418270425 20.471723778994807 28 13.781478809098543 21.934919151654228 40.08942406642931 24.194177972817922 29 15.250588471865722 21.54339314652062 39.639938018239675 23.566080363373985 30 20.604203877408594 22.78539406914988 36.61418719911049 19.996214854331036 31 19.446185874309506 26.316225263481623 31.796406477330525 22.441182384878346 32 17.029606936279436 26.747968441347986 31.747909298446906 24.47451532392567 33 19.73953466365432 23.62640612247312 30.777965720774535 25.856093493098026 34 18.01965910031819 22.966371346447286 31.62134349014088 27.392626063093644 35 17.519310157201833 26.320956695567833 30.146319537265942 26.0134136099644 36 21.682970393063723 28.92915863308927 27.747483469559146 21.64038750428786 37 20.33214653245171 24.373972392093776 29.91684508108492 25.377035994369596 38 17.288652842999255 24.959487112761856 31.557469156977085 26.194390887261804 39 17.923847600572504 26.753882731455743 31.842537940171038 23.47973172780071 40 19.20843141197762 25.526076105085103 29.666079180515965 25.599413302421308 41 17.352527176163047 25.361658840089422 26.887545687891084 30.39826829585645 42 18.900888326374186 26.617854058977304 28.61688411539963 25.864373499248885 43 19.382311541145718 24.345583799576538 33.493807738257175 22.77829692102057 44 18.547213777930235 22.823245525839532 32.89055014726582 25.73899054896441 45 21.144769993257707 20.89755266675341 31.163577435800384 26.7940999041885 46 22.280313693947313 21.30209011012408 33.03959025798133 23.378005937947268 47 16.37193787629671 25.1688529825765 35.213683301593306 23.24552583953348 48 16.53872085733549 24.36805810198602 35.939958126826035 23.15326291385245 49 20.252895045007747 20.755609704167206 36.75376444565359 22.237730805171456 50 20.35225511881809 18.396990809193174 33.90425947173561 27.34649460025313 51 18.291716445275075 18.326019327900074 31.756189304597772 31.626074922227087 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 334.0 1 537.5 2 741.0 3 3033.5 4 5326.0 5 3379.5 6 1433.0 7 1346.0 8 1259.0 9 1256.0 10 1253.0 11 1177.0 12 1101.0 13 1051.5 14 1002.0 15 910.0 16 818.0 17 782.5 18 747.0 19 677.5 20 608.0 21 592.5 22 577.0 23 544.0 24 511.0 25 512.0 26 543.5 27 574.0 28 545.0 29 516.0 30 601.0 31 686.0 32 776.5 33 867.0 34 958.5 35 1050.0 36 1127.0 37 1204.0 38 1355.0 39 1506.0 40 1899.5 41 2293.0 42 2772.0 43 3251.0 44 3819.5 45 4388.0 46 5595.0 47 6802.0 48 8435.0 49 10068.0 50 10161.5 51 10255.0 52 8677.0 53 7099.0 54 5628.5 55 4158.0 56 3434.5 57 2711.0 58 2505.5 59 2300.0 60 2114.5 61 1929.0 62 1761.0 63 1593.0 64 1524.0 65 1455.0 66 1254.0 67 1053.0 68 963.0 69 873.0 70 745.5 71 618.0 72 514.0 73 410.0 74 335.0 75 226.0 76 192.0 77 147.0 78 102.0 79 80.5 80 59.0 81 41.5 82 24.0 83 18.5 84 13.0 85 8.0 86 3.0 87 3.0 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 84541.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.70400160868691 #Duplication Level Percentage of deduplicated Percentage of total 1 79.65129233511587 50.74106055050213 2 11.85940285204991 15.109828367301073 3 4.296642899584076 8.211400385611716 4 1.7899584076054667 4.561100531103252 5 0.8467023172905526 2.6969162891378144 6 0.41406714200831846 1.5826640328361385 7 0.22838680926916222 1.0184407565559905 8 0.19867795603089722 1.012526466448232 9 0.12254901960784313 0.7026176648016939 >10 0.5440433749257279 6.1023645331850815 >50 0.027852049910873443 1.1887723116594315 >100 0.018568033273915627 2.952413621792976 >500 0.0 0.0 >1k 0.0018568033273915628 4.119894489064477 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3483 4.119894489064477 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCC 435 0.5145432393749778 No Hit CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT 345 0.40808601743532724 No Hit CCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 331 0.3915260051336038 No Hit GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 310 0.36668598668101865 No Hit TCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 274 0.32410309790515845 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 216 0.2554973326551614 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGC 194 0.2294744561810246 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 172 0.20345157970688776 No Hit TCCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTG 111 0.13129724039223573 No Hit GGGACTGTCTAGGGCCTGTCTCTTATACACATCTGACGCAGCTACCATCGT 108 0.1277486663275807 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 89 0.1052743639180989 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.43647460995256737 0.0 2 0.0 0.0 0.0 1.6181497734826888 0.0 3 0.0 0.0 0.0 2.272270259400764 0.0 4 0.0 0.0 0.0 3.1688766397369323 0.0 5 0.0 0.0 0.0 5.085106634650643 0.0 6 0.0 0.0 0.0 6.595616328172129 0.0 7 0.0 0.0 0.0 8.097846015542755 0.0 8 0.0 0.0 0.0 10.242367608615938 0.0 9 0.0 0.0 0.0 11.344791284702097 0.0 10 0.0 0.0 0.0 13.568564365219244 0.0 11 0.0 0.0 0.0 18.801528252563845 0.0 12 0.0 0.0 0.0 23.56253178930933 0.0 13 0.0 0.0 0.0 25.08368720502478 0.0 14 0.0 0.0 0.0 25.665653351628205 0.0 15 0.0 0.0 0.0 26.456985368046272 0.0 16 0.0 0.0 0.0 28.38622680119705 0.0 17 0.0 0.0 0.0 30.72591996782626 0.0 18 0.0 0.0 0.0 32.75452147478738 0.0 19 0.0 0.0 0.0 33.972865236985605 0.0 20 0.0 0.0 0.0 35.038620314403666 0.0 21 0.0 0.0 0.0 36.33621556404585 0.0 22 0.0 0.0 0.0 37.30970771578288 0.0 23 0.0 0.0 0.0 38.089211151985424 0.0 24 0.0 0.0 0.0 38.59784010125264 0.0 25 0.0 0.0 0.0 38.90420032883453 0.0 26 0.0 0.0 0.0 39.14077193314486 0.0 27 0.0 0.0 0.0 39.37024638932589 0.0 28 0.0 0.0 0.0 39.521652216084505 0.0 29 0.0 0.0 0.0 39.702629493381906 0.0 30 0.0 0.0 0.0 39.885972486722416 0.0 31 0.0 0.0 0.0 40.05748689984741 0.0 32 0.0 0.0 0.0 40.245561325274124 0.0 33 0.0 0.0 0.0 40.400515726097396 0.0 34 0.0 0.0 0.0 40.53891011461894 0.0 35 0.0 0.0 0.0 40.70332737961463 0.0 36 0.0 0.0 0.0 40.81806460770514 0.0 37 0.0 0.0 0.0 40.95645899622668 0.0 38 0.0 0.0 0.0 41.11851054517926 0.0 39 0.0 0.0 0.0 41.31368211873529 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGCAAC 20 6.996206E-4 45.0 7 GCGATCT 20 6.996206E-4 45.0 9 CAACCCG 20 6.996206E-4 45.0 23 AGGGTGG 20 6.996206E-4 45.0 6 AACCCGA 20 6.996206E-4 45.0 24 CATTCCC 20 6.996206E-4 45.0 13 ACCCGAG 20 6.996206E-4 45.0 41 CTAGGGT 20 6.996206E-4 45.0 4 ACCTGGG 20 6.996206E-4 45.0 3 CGGGATC 20 6.996206E-4 45.0 6 CGCGGGA 20 6.996206E-4 45.0 4 TGGGCAA 20 6.996206E-4 45.0 6 TGGGTAC 20 6.996206E-4 45.0 6 AGACCCG 20 6.996206E-4 45.0 39 TGGGACA 20 6.996206E-4 45.0 6 CCAAGCA 20 6.996206E-4 45.0 18 CGACTCC 20 6.996206E-4 45.0 28 TGCGGGT 20 6.996206E-4 45.0 4 TTGCCTG 20 6.996206E-4 45.0 1 GGCGATC 25 3.860103E-5 44.999996 8 >>END_MODULE