##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933577.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 145450 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.848765898934342 33.0 31.0 34.0 30.0 34.0 2 32.06710897215538 33.0 31.0 34.0 30.0 34.0 3 32.154575455482984 33.0 31.0 34.0 30.0 34.0 4 35.76645582674458 37.0 35.0 37.0 35.0 37.0 5 35.858026813337915 37.0 35.0 37.0 35.0 37.0 6 35.85746992093503 37.0 35.0 37.0 35.0 37.0 7 35.833351667239604 37.0 35.0 37.0 35.0 37.0 8 35.67463733241664 37.0 35.0 37.0 33.0 37.0 9 37.48173942935717 39.0 37.0 39.0 34.0 39.0 10 37.0770849089034 39.0 37.0 39.0 33.0 39.0 11 37.10749398418701 39.0 37.0 39.0 33.0 39.0 12 37.11872121003781 39.0 37.0 39.0 33.0 39.0 13 37.04772774149192 39.0 37.0 39.0 33.0 39.0 14 38.05008594018563 40.0 37.0 41.0 33.0 41.0 15 38.093991062220695 40.0 37.0 41.0 33.0 41.0 16 38.26132004125129 40.0 38.0 41.0 33.0 41.0 17 38.30282571330354 40.0 38.0 41.0 33.0 41.0 18 37.98613956686147 39.0 37.0 40.0 34.0 41.0 19 37.58225507047095 38.0 37.0 40.0 34.0 41.0 20 36.963513234788586 38.0 35.0 40.0 33.0 41.0 21 36.86628394637332 38.0 35.0 40.0 33.0 41.0 22 36.87748367136473 38.0 35.0 40.0 33.0 41.0 23 36.77442420075627 38.0 35.0 40.0 33.0 41.0 24 36.657903059470605 38.0 35.0 40.0 33.0 41.0 25 36.560233757304914 38.0 35.0 40.0 33.0 41.0 26 36.58271570986593 38.0 35.0 40.0 33.0 41.0 27 36.53511172224132 38.0 35.0 40.0 33.0 41.0 28 36.48766586455827 38.0 35.0 40.0 33.0 41.0 29 36.32129941560674 38.0 35.0 40.0 32.0 41.0 30 36.04470952217257 38.0 35.0 40.0 31.0 41.0 31 35.64760398762461 37.0 35.0 40.0 30.0 41.0 32 35.3037194912341 38.0 35.0 40.0 27.0 41.0 33 34.66666895840495 38.0 35.0 40.0 22.0 41.0 34 34.1963492609144 38.0 34.0 40.0 18.0 41.0 35 33.84543141973187 38.0 34.0 40.0 16.0 41.0 36 33.54549329666552 38.0 33.0 40.0 15.0 41.0 37 33.41172911653489 37.0 33.0 40.0 15.0 41.0 38 33.28341010656583 37.0 33.0 40.0 12.0 41.0 39 33.258824338260574 37.0 33.0 40.0 12.0 41.0 40 33.101423169474046 37.0 33.0 40.0 10.0 41.0 41 32.92198693709178 37.0 33.0 40.0 10.0 41.0 42 32.648621519422484 37.0 32.0 40.0 10.0 41.0 43 32.49705053282915 37.0 31.0 40.0 10.0 41.0 44 32.39218288071502 37.0 31.0 40.0 10.0 41.0 45 32.37127535235476 36.0 31.0 40.0 10.0 41.0 46 32.07199037469921 36.0 31.0 40.0 10.0 41.0 47 31.94014437951186 36.0 31.0 40.0 10.0 41.0 48 31.843492609144036 35.0 31.0 40.0 10.0 41.0 49 31.867370230319697 35.0 31.0 40.0 9.0 41.0 50 31.695503609487798 35.0 30.0 40.0 8.0 41.0 51 30.77465108284634 35.0 27.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 5.0 12 7.0 13 4.0 14 4.0 15 13.0 16 20.0 17 26.0 18 56.0 19 116.0 20 201.0 21 327.0 22 530.0 23 877.0 24 1607.0 25 2980.0 26 4349.0 27 4879.0 28 4558.0 29 4269.0 30 4165.0 31 4361.0 32 5026.0 33 5947.0 34 8696.0 35 11912.0 36 15177.0 37 16038.0 38 27056.0 39 22234.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.89309040907528 4.385699553111035 37.765555173599175 36.9556548642145 2 42.84427638363699 4.668958404950155 35.713303540735645 16.773461670677207 3 17.430732210381574 4.777586799587487 60.651082846338944 17.14059814369199 4 14.140941904434515 4.822963217600551 60.46820213131661 20.567892746648333 5 11.26503953248539 6.099690615331729 62.07287727741492 20.562392574767962 6 15.406668958404952 6.800275008594019 65.40391887246476 12.389137160536267 7 56.763836369886555 2.809900309384668 35.31660364386387 5.109659676864902 8 55.155723616363005 3.060845651426607 34.655207975249226 7.128222756961156 9 50.168442763836374 5.0553454795462365 37.65761430044689 7.118597456170505 10 25.647988999656242 18.083877621175663 41.74424200756274 14.523891371605362 11 17.434857339291852 15.531797868683398 46.47576486765212 20.55757992437264 12 15.739429357167412 12.855964248882778 52.22550704709522 19.17909934685459 13 18.906153317291167 14.280508765898933 53.54898590580955 13.264352011000344 14 15.669989687177724 16.97009281540048 51.94774836713647 15.412169130285323 15 11.183911997249913 15.408044001375043 54.690271570986596 18.71777243038845 16 11.612925403918872 15.107597112409762 51.24647645238913 22.03300103128223 17 10.979718116191131 15.49467170849089 49.31179099346855 24.213819181849434 18 12.761773805431421 14.259195599862496 52.84358886215195 20.135441732554142 19 12.950154692334134 17.277414919216223 52.471639738741835 17.300790649707803 20 12.697146785837058 20.78308697146786 50.00481265039532 16.514953592299758 21 11.95393606050189 21.546235819869374 50.620144379511856 15.879683740116878 22 10.049501546923342 19.55379855620488 48.643520110003436 21.75317978686834 23 10.609144035751116 20.114816088002748 46.14025438294947 23.135785493296666 24 12.09969061533173 19.892059126847712 46.17394293571674 21.834307322103815 25 11.67480233757305 21.527672739773116 43.61361292540391 23.183911997249915 26 11.434169817806806 21.711928497765555 45.357167411481605 21.496734272946032 27 12.863526985218288 19.916122378824337 47.70711584737023 19.513234788587145 28 10.739085596424887 18.167755242351326 48.36232382261946 22.730835338604333 29 13.903059470608456 16.147129597799932 46.631832244757646 23.31797868683396 30 18.371949123410104 17.2059126847714 44.05843932622894 20.363698865589548 31 16.854589205912685 21.592987280852526 41.43623238226194 20.116191130972844 32 16.595393606050187 20.49570299071846 40.34101065658302 22.567892746648333 33 16.971467858370573 16.406325197662426 40.16844276383637 26.45376418013063 34 17.951185974561707 15.14472327260227 42.15950498453076 24.74458576830526 35 21.21553798556205 15.502921966311447 38.60433138535579 24.67720866277071 36 21.2251632863527 16.40907528360261 38.83533860433139 23.530422825713305 37 16.578893090409075 17.168786524578895 45.00171880371261 21.250601581299417 38 17.08353386043314 17.224475764867652 44.709522172567894 20.982468202131315 39 17.85080783774493 14.739773117909936 43.4534204193881 23.955998624957033 40 20.871777243038846 14.376074252320384 42.222756961155035 22.529391543485733 41 22.381574424200757 15.74767961498797 39.333104159504984 22.53764180130629 42 22.952217256789275 14.906840838776212 42.85733929185287 19.283602612581642 43 18.281883808869026 13.919559986249569 47.15297353042283 20.645582674458577 44 17.22103815744242 14.413887933997938 42.792024750773464 25.573049157786183 45 20.84977655551736 12.426263320728772 40.103815744242006 26.620144379511864 46 22.81608800275009 13.75524235132348 42.89240288759024 20.536266758336197 47 16.686146442076318 17.684427638363697 46.86008937779306 18.76933654176693 48 15.938123066345824 16.808525266414577 47.2059126847714 20.0474389824682 49 20.26400825025782 12.730147817119287 47.07184599518735 19.933997937435542 50 19.559298728085253 11.269164661395669 42.95634238569955 26.215194224819527 51 17.74905465795806 11.931247851495359 39.24372636644895 31.075971124097627 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 277.0 1 570.5 2 864.0 3 8582.5 4 16301.0 5 9756.0 6 3211.0 7 2935.5 8 2660.0 9 2582.5 10 2505.0 11 2332.5 12 2160.0 13 2037.5 14 1915.0 15 1749.5 16 1584.0 17 1473.5 18 1363.0 19 1239.0 20 1115.0 21 1016.0 22 917.0 23 844.0 24 771.0 25 780.0 26 779.5 27 770.0 28 784.0 29 798.0 30 864.0 31 930.0 32 953.0 33 976.0 34 1125.5 35 1275.0 36 1380.5 37 1486.0 38 1686.0 39 1886.0 40 2650.0 41 3414.0 42 4500.0 43 5586.0 44 6638.5 45 7691.0 46 10318.0 47 12945.0 48 16075.5 49 19206.0 50 19141.5 51 19077.0 52 15580.5 53 12084.0 54 9087.5 55 6091.0 56 4821.5 57 3552.0 58 3053.5 59 2555.0 60 2354.0 61 2153.0 62 1960.5 63 1768.0 64 1638.0 65 1508.0 66 1257.0 67 1006.0 68 859.5 69 713.0 70 592.5 71 472.0 72 439.0 73 406.0 74 360.5 75 244.0 76 173.0 77 134.5 78 96.0 79 77.0 80 58.0 81 38.0 82 18.0 83 13.0 84 8.0 85 4.5 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 145450.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.09178411825369 #Duplication Level Percentage of deduplicated Percentage of total 1 78.29375048561292 41.56754898590581 2 11.082334049882157 11.767617738054314 3 4.536272046826034 7.225163286352698 4 2.207920022791433 4.6888965280165005 5 1.1356867214006372 3.0147817119284976 6 0.616404651524177 1.9635613612925404 7 0.4221594882287431 1.5689240288759023 8 0.28230297065603066 1.199037469920935 9 0.20719484084846285 0.9900309384668271 >10 1.0981326564968532 10.518391199724991 >50 0.08158296858408225 2.7679614987968377 >100 0.02719432286136075 2.1175661739429357 >500 0.006474838776514464 2.1533172911653486 >1k 0.0012949677553028929 0.730147817119285 >5k 0.0 0.0 >10k+ 0.0012949677553028929 7.727053970436576 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11239 7.727053970436576 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCC 1062 0.730147817119285 No Hit CCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 708 0.48676521141285667 No Hit CTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGCT 690 0.47438982468202134 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGC 592 0.40701271914747333 No Hit GCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 575 0.3953248539016845 No Hit TCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 567 0.38982468202131315 No Hit TCCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTG 266 0.18288071502234446 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 213 0.14644207631488484 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 202 0.13887933997937435 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCG 170 0.11687865245788931 No Hit CGCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTG 167 0.11481608800275007 No Hit GGCCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCT 164 0.11275352354761087 No Hit GCCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTG 163 0.11206600206256445 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 153 0.10519078721210039 No Hit GTGCCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTC 152 0.10450326572705396 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5053282915091096 0.0 2 0.0 0.0 0.0 1.8968717772430388 0.0 3 0.0 0.0 0.0 2.7459608112753524 0.0 4 0.0 0.0 0.0 3.920935029219663 0.0 5 0.0 0.0 0.0 6.369886558954967 0.0 6 0.0 0.0 0.0 8.15125472671021 0.0 7 0.0 0.0 0.0 9.817806806462702 0.0 8 0.0 0.0 0.0 12.511515984874528 0.0 9 0.0 0.0 0.0 13.746992093502922 0.0 10 0.0 0.0 0.0 16.46888965280165 0.0 11 0.0 0.0 0.0 22.69989687177724 0.0 12 0.0 0.0 0.0 28.155379855620488 0.0 13 0.0 0.0 0.0 30.067377105534547 0.0 14 0.0 0.0 0.0 30.75421106909591 0.0 15 0.0 0.0 0.0 31.74561705053283 0.0 16 0.0 0.0 0.0 33.99312478514953 0.0 17 0.0 0.0 0.0 36.94396699896872 0.0 18 0.0 0.0 0.0 39.54898590580956 0.0 19 0.0 0.0 0.0 41.09247163973874 0.0 20 0.0 0.0 0.0 42.42351323478859 0.0 21 0.0 0.0 0.0 43.93606050189069 0.0 22 0.0 0.0 0.0 45.17153661051908 0.0 23 0.0 0.0 0.0 46.05706428325885 0.0 24 0.0 0.0 0.0 46.56514266070815 0.0 25 0.0 0.0 0.0 46.875902371949124 0.0 26 0.0 0.0 0.0 47.13303540735648 0.0 27 0.0 0.0 0.0 47.35510484702647 0.0 28 0.0 0.0 0.0 47.52698521828807 0.0 29 0.0 0.0 0.0 47.718116191130974 0.0 30 0.0 0.0 0.0 47.9243726366449 0.0 31 0.0 0.0 0.0 48.08731522860089 0.0 32 0.0 0.0 0.0 48.228944654520454 0.0 33 0.0 0.0 0.0 48.382261945685805 0.0 34 0.0 0.0 0.0 48.52457889309041 0.0 35 0.0 0.0 0.0 48.7081471295978 0.0 36 0.0 0.0 0.0 48.84427638363699 0.0 37 0.0 0.0 0.0 48.99828119628739 0.0 38 0.0 0.0 0.0 49.16878652457889 0.0 39 0.0 0.0 0.0 49.43348229632176 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGACC 30 2.152401E-6 45.000004 6 TGTTTCG 20 7.012962E-4 45.0 1 GGTAATG 20 7.012962E-4 45.0 8 GTATTGG 20 7.012962E-4 45.0 2 TATGGGT 25 3.8739672E-5 45.0 4 ATGGAAG 20 7.012962E-4 45.0 40 GGGTACA 20 7.012962E-4 45.0 7 CGTTAGG 20 7.012962E-4 45.0 2 GTGCTAG 20 7.012962E-4 45.0 1 GTACTTG 25 3.8739672E-5 45.0 1 AAACACG 40 6.7448127E-9 45.0 40 ATTGGGC 20 7.012962E-4 45.0 4 GAGTTGC 20 7.012962E-4 45.0 10 TTACGGG 20 7.012962E-4 45.0 3 GGCATAG 20 7.012962E-4 45.0 7 AACACGT 40 6.7448127E-9 45.0 41 CGTTTTT 3555 0.0 44.55696 1 TGGGAGA 75 0.0 42.0 6 TTGGGAG 170 0.0 41.029415 5 CTCGGGA 55 6.002665E-11 40.909092 4 >>END_MODULE