##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933576.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 104978 Sequences flagged as poor quality 0 Sequence length 51 %GC 32 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03746499266513 33.0 31.0 34.0 30.0 34.0 2 32.28974642306007 34.0 31.0 34.0 30.0 34.0 3 32.26487454514279 33.0 31.0 34.0 30.0 34.0 4 35.93706300367696 37.0 35.0 37.0 35.0 37.0 5 35.98766408199813 37.0 35.0 37.0 35.0 37.0 6 35.98867381737126 37.0 35.0 37.0 35.0 37.0 7 36.045781020785306 37.0 35.0 37.0 35.0 37.0 8 35.842728952732955 37.0 35.0 37.0 35.0 37.0 9 37.68179047038427 39.0 38.0 39.0 35.0 39.0 10 37.267075006191774 39.0 37.0 39.0 34.0 39.0 11 37.28429766236735 39.0 37.0 39.0 34.0 39.0 12 37.32761149955229 39.0 37.0 39.0 34.0 39.0 13 37.239031035074014 39.0 37.0 39.0 34.0 39.0 14 38.39648307264379 40.0 38.0 41.0 33.0 41.0 15 38.432061955838364 40.0 38.0 41.0 33.0 41.0 16 38.52574825201471 40.0 38.0 41.0 34.0 41.0 17 38.51177389548286 40.0 38.0 41.0 34.0 41.0 18 37.84957800682048 39.0 38.0 40.0 34.0 41.0 19 37.16576806568995 37.0 37.0 40.0 34.0 41.0 20 36.30841700165749 35.0 35.0 40.0 33.0 41.0 21 36.18049496084894 35.0 35.0 40.0 33.0 41.0 22 36.18523881194155 35.0 35.0 40.0 33.0 41.0 23 36.14662119682219 35.0 35.0 40.0 33.0 41.0 24 35.967259806816664 35.0 35.0 40.0 33.0 41.0 25 35.85154032273429 35.0 35.0 40.0 32.0 41.0 26 35.82147688087028 35.0 35.0 40.0 32.0 41.0 27 35.78819371677876 35.0 35.0 40.0 32.0 41.0 28 35.63241822096058 35.0 35.0 40.0 32.0 41.0 29 35.46876488407095 35.0 35.0 40.0 31.0 41.0 30 35.190868562937 35.0 35.0 40.0 30.0 41.0 31 34.59300996399246 35.0 35.0 40.0 25.0 41.0 32 33.75004286612433 35.0 33.0 40.0 21.0 41.0 33 32.7948046257311 35.0 33.0 40.0 15.0 41.0 34 31.970889138676675 35.0 31.0 40.0 10.0 41.0 35 31.343786317133112 35.0 30.0 40.0 8.0 41.0 36 31.061412867457943 35.0 27.0 40.0 7.0 41.0 37 30.778896530701672 35.0 25.0 40.0 7.0 41.0 38 30.57253900817314 35.0 24.0 40.0 7.0 41.0 39 30.464306807140545 35.0 23.0 40.0 7.0 41.0 40 30.360370744346433 35.0 23.0 40.0 7.0 41.0 41 30.219855588790033 35.0 23.0 40.0 7.0 41.0 42 30.00127645792452 35.0 22.0 40.0 7.0 41.0 43 29.676551277410503 35.0 21.0 39.0 7.0 41.0 44 29.430423517308387 35.0 21.0 39.0 7.0 41.0 45 29.412648364419212 35.0 20.0 39.0 7.0 41.0 46 29.181418963973403 35.0 20.0 39.0 7.0 41.0 47 28.983034540570404 35.0 20.0 39.0 7.0 41.0 48 28.885480767398885 35.0 20.0 39.0 7.0 41.0 49 28.88621425441521 35.0 20.0 39.0 7.0 41.0 50 28.74976661776753 35.0 19.0 39.0 7.0 40.0 51 27.833965211758652 34.0 18.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 6.0 11 1.0 12 0.0 13 3.0 14 3.0 15 2.0 16 10.0 17 20.0 18 63.0 19 130.0 20 219.0 21 386.0 22 624.0 23 977.0 24 1826.0 25 3608.0 26 5283.0 27 5444.0 28 4582.0 29 3908.0 30 3743.0 31 3690.0 32 3788.0 33 4179.0 34 5675.0 35 9177.0 36 10991.0 37 9843.0 38 16097.0 39 10695.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 15.749014079140391 3.7083960448855953 30.81693307169121 49.725656804282806 2 53.37689801672732 3.6064699270323306 29.911981558040736 13.104650498199621 3 12.653127321915067 4.346625007144354 70.46905065823316 12.531197012707423 4 10.603173998361562 3.771266360570786 70.1299319857494 15.495627655318255 5 8.4008077882985 4.9505610699384635 71.24540379889119 15.403227342871839 6 11.523366800662997 5.469717464611633 73.33631808569415 9.670597649031226 7 44.643639619729846 2.1756939549238887 48.90453237821258 4.276134047133685 8 42.4965230810265 2.7615309874449885 48.62066337708853 6.121282554439978 9 39.272037950808745 4.251366953075882 50.83922345634323 5.637371639772143 10 19.836537179218503 14.874545142791822 54.66288174665168 10.626035931337995 11 13.356131760940388 13.123702109013315 57.358684676789416 16.161481453256872 12 12.217798014822154 10.504105622130352 62.042523195336166 15.23557316771133 13 14.581150336260931 12.678846996513554 62.69599344624588 10.044009220979634 14 12.014898359656309 14.667835165463238 60.69176398864524 12.62550248623521 15 8.116938787174456 13.240869515517536 63.973403951304086 14.668787746003925 16 7.864504943893007 13.177999199832346 61.50717293147135 17.45032292480329 17 7.860694621730267 13.117986625769209 59.06094610299301 19.960372649507516 18 8.692297433748024 12.296862199698985 62.82649698031969 16.184343386233305 19 9.483891863057021 14.080092971860772 62.692183124083144 13.743832040999065 20 9.747756672826688 17.24170778639334 60.27548629236602 12.735049248413954 21 8.838042256472784 18.061879631922878 60.723199146487836 12.3768789651165 22 7.194840823791651 17.247423269637448 58.16647297529006 17.391262931280842 23 7.537769818438149 17.100725866372002 56.86334279563338 18.498161519556476 24 9.219074472746671 16.251024024081236 56.35371220636705 18.176189296805045 25 8.127417173121987 17.786583855664997 54.759092381260835 19.32690658995218 26 8.176951361237593 18.313360894663646 56.7185505534493 16.79113719064947 27 9.551525081445636 16.95498104364724 58.30650231477071 15.18699156013641 28 7.653984644401684 15.137457372020805 59.059993522452324 18.14856446112519 29 10.519346910781307 14.24774714702128 57.21293985406466 18.01996608813275 30 14.143915868086646 14.988854807673988 55.08106460401226 15.786164720227095 31 12.322581874297473 19.796528796509744 51.02973956448018 16.851149764712606 32 12.283526072129398 20.27567680847416 49.063613328506925 18.37718379088952 33 14.214406828097314 16.889252986339994 47.934805387795535 20.96153479776715 34 14.19916553944636 16.28817466516794 47.448989312046336 22.06367048333937 35 16.54537141115281 17.596067747528053 43.9863590466574 21.872201794661738 36 17.545580978871765 17.615119358341747 44.9456076511269 19.893692011659585 37 13.562841738268972 19.468841090514204 47.59854445693384 19.36977271428299 38 12.491188629998666 22.981005544018746 47.78334508182667 16.744460744155916 39 15.773781173198195 19.72127493379565 47.395644801767986 17.109299091238164 40 15.613747642363162 16.28817466516794 47.552820590980964 20.54525710148793 41 15.443235725580598 16.41963077978243 45.216140524681364 22.92099296995561 42 20.117548438720494 15.872849549429406 46.0363123702109 17.9732896416392 43 18.644858922821925 16.638724304139917 47.03747451847053 17.678942254567623 44 15.14698317742765 17.31600906856675 45.59526757987388 21.941740174131724 45 17.201699403684582 15.55849797100345 44.27118062832213 22.968621996989846 46 17.952332869744136 15.77282859265751 48.018632475375796 18.25620606222256 47 13.11989178685058 18.5838937682181 50.35150221951265 17.94471222541866 48 13.460915620415706 16.939739754996285 50.96305892663224 18.636285697955763 49 18.14951704166587 13.464725942578445 50.72681895254244 17.658938063213245 50 16.277696279220407 12.086341900207662 47.86431442778487 23.77164739278706 51 14.175351025929242 12.073005772638076 44.79795766732077 28.953685534111912 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 264.0 1 438.0 2 612.0 3 9456.5 4 18301.0 5 10950.0 6 3599.0 7 3317.0 8 3035.0 9 2949.5 10 2864.0 11 2811.5 12 2759.0 13 2561.5 14 2364.0 15 2166.0 16 1968.0 17 1793.5 18 1619.0 19 1502.5 20 1386.0 21 1224.0 22 1062.0 23 1000.5 24 939.0 25 864.0 26 732.5 27 676.0 28 671.0 29 666.0 30 674.0 31 682.0 32 723.5 33 765.0 34 781.5 35 798.0 36 957.5 37 1117.0 38 1237.5 39 1358.0 40 2011.0 41 2664.0 42 3551.0 43 4438.0 44 4825.0 45 5212.0 46 6943.0 47 8674.0 48 10386.5 49 12099.0 50 11250.0 51 10401.0 52 8243.0 53 6085.0 54 4459.5 55 2834.0 56 2129.0 57 1424.0 58 1158.5 59 893.0 60 863.5 61 834.0 62 705.0 63 576.0 64 509.5 65 443.0 66 364.0 67 285.0 68 230.5 69 176.0 70 142.0 71 108.0 72 90.0 73 72.0 74 72.0 75 48.0 76 24.0 77 23.0 78 22.0 79 15.0 80 8.0 81 7.5 82 7.0 83 5.5 84 4.0 85 2.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 104978.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.12160643182381 #Duplication Level Percentage of deduplicated Percentage of total 1 81.19104830900548 43.129989140581834 2 9.737115805329411 10.345024671836004 3 3.799806333608292 6.055554497132733 4 1.8308646845748306 3.8903389281563756 5 0.9503998852347308 2.5243384328144947 6 0.6025176630922068 1.9204023700203854 7 0.36760750277947135 1.3669530758825659 8 0.20980525768389344 0.8916153860808931 9 0.17573431840189363 0.8401760368839186 >10 1.032887422443783 10.068776315037436 >50 0.06455546390273643 2.298576844672217 >100 0.03227773195136822 3.4969231648535883 >500 0.0017932073306315675 0.6134618682009564 >1k 0.0017932073306315675 1.0745108498923583 >5k 0.0 0.0 >10k+ 0.0017932073306315675 11.48335841795424 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12055 11.48335841795424 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCC 1128 1.0745108498923583 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGC 644 0.6134618682009564 No Hit CTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGCT 497 0.47343252872030334 TruSeq Adapter, Index 19 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 477 0.454380917906609 TruSeq Adapter, Index 13 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 439 0.41818285736058985 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 329 0.3133989978852712 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCG 190 0.1809903027300958 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 183 0.17432223894530283 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 164 0.15622320867229325 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 159 0.15146030596886967 No Hit TCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTG 159 0.15146030596886967 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 156 0.1486025643468155 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 133 0.12669321191106708 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTTTTTTTTTTTTT 127 0.1209777286669588 No Hit TTCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCT 117 0.11145192326011163 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 116 0.11049934271942692 No Hit GTTCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTC 115 0.10954676217874221 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTTTTTTTTTTTT 105 0.10002095677189506 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5105831698070071 0.0 2 0.0 0.0 0.0 1.841338185143554 0.0 3 0.0 0.0 0.0 2.5776829430928383 0.0 4 0.0 0.0 0.0 3.517879936748652 0.0 5 0.0 0.0 0.0 5.639276800853512 0.0 6 0.0 0.0 0.0 7.054811484310998 0.0 7 0.0 0.0 0.0 8.50178132561108 0.0 8 0.0 0.0 0.0 10.833698489207263 0.0 9 0.0 0.0 0.0 11.773895482863075 0.0 10 0.0 0.0 0.0 14.17916134809198 0.0 11 0.0 0.0 0.0 19.920364266798757 0.0 12 0.0 0.0 0.0 24.77757244375012 0.0 13 0.0 0.0 0.0 26.39410162129208 0.0 14 0.0 0.0 0.0 26.935167368400997 0.0 15 0.0 0.0 0.0 27.762959858256014 0.0 16 0.0 0.0 0.0 29.621444493131893 0.0 17 0.0 0.0 0.0 31.892396502124253 0.0 18 0.0 0.0 0.0 34.12524528948923 0.0 19 0.0 0.0 0.0 35.4293280496866 0.0 20 0.0 0.0 0.0 36.658156947169886 0.0 21 0.0 0.0 0.0 37.97462325439616 0.0 22 0.0 0.0 0.0 39.09295280916002 0.0 23 0.0 0.0 0.0 39.913124654689554 0.0 24 0.0 0.0 0.0 40.322734287183984 0.0 25 0.0 0.0 0.0 40.616129093714875 0.0 26 0.0 0.0 0.0 40.870468098077694 0.0 27 0.0 0.0 0.0 41.09813484730134 0.0 28 0.0 0.0 0.0 41.28198289165349 0.0 29 0.0 0.0 0.0 41.46106803330222 0.0 30 0.0 0.0 0.0 41.661109946846004 0.0 31 0.0 0.0 0.0 41.82685896092514 0.0 32 0.0 0.0 0.0 41.95259959229553 0.0 33 0.0 0.0 0.0 42.0973918344796 0.0 34 0.0 0.0 0.0 42.234563432338206 0.0 35 0.0 0.0 0.0 42.388881479929125 0.0 36 0.0 0.0 0.0 42.4965230810265 0.0 37 0.0 0.0 0.0 42.632742098344416 0.0 38 0.0 0.0 0.0 42.78515498485397 0.0 39 0.0 0.0 0.0 42.92613690487531 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACATGG 30 2.146633E-6 45.000004 2 TTGGGTG 35 1.1978773E-7 45.000004 5 TACTGGG 30 2.146633E-6 45.000004 3 GCTCTTG 35 1.1978773E-7 45.000004 1 TTATGGG 40 6.71389E-9 45.0 3 TAGCGGG 20 7.0039934E-4 45.0 3 ACTAATC 25 3.8665454E-5 45.0 10 TTCGTTG 20 7.0039934E-4 45.0 1 CTCCTTG 20 7.0039934E-4 45.0 1 GCGATGG 25 3.8665454E-5 45.0 9 AATTCGA 25 3.8665454E-5 45.0 13 GGACTAA 25 3.8665454E-5 45.0 8 CTCTCGG 20 7.0039934E-4 45.0 2 TTCGAGC 25 3.8665454E-5 45.0 15 GGCGATG 50 2.1827873E-11 45.0 8 GGATCAA 20 7.0039934E-4 45.0 8 TCCGGGA 20 7.0039934E-4 45.0 4 CGGGAGG 20 7.0039934E-4 45.0 6 ATTCGAG 25 3.8665454E-5 45.0 14 CGGGAAT 25 3.8665454E-5 45.0 6 >>END_MODULE